BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030349
         (1135 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-...    93   4e-46
ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group] g...    93   4e-46
ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707...    97   5e-46
ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group] g...    89   2e-44
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]         86   3e-44
gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]      91   6e-44
emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]         94   1e-43
emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]    99   1e-43
gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subc...    94   2e-43
gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]      94   2e-43
emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]                 90   2e-43
emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]                90   2e-43
emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]          91   3e-43
emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]            91   3e-43
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    90   1e-40
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    76   5e-37
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      78   1e-36
gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]      86   4e-36
gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]                   87   1e-35
gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subc...    78   2e-35

>gb|AAX92941.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza
           sativa Japonica Group] gi|77548751|gb|ABA91548.1|
           retrotransposon protein, putative, Ty1-copia subclass
           [Oryza sativa Japonica Group]
          Length = 2340

 Score = 92.8 bits (229), Expect(4) = 4e-46
 Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 547 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 606

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G+++E GL  LSK  LLD 
Sbjct: 607 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDG 666

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 667 QSIGKLKFCEHCIFGKHKRVKF 688



 Score = 75.5 bits (184), Expect(4) = 4e-46
 Identities = 43/108 (39%), Positives = 56/108 (51%)
 Frame = -3

Query: 440  YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
            Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 720  YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 779

Query: 260  ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
              C   GI RH  V     QNGVAERMNRTI+ K RCL+ ++G+PK F
Sbjct: 780  SYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQF 827



 Score = 48.5 bits (114), Expect(4) = 4e-46
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+E+WSG P N  DLRV  C
Sbjct: 838 LINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGC 871



 Score = 37.4 bits (85), Expect(4) = 4e-46
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +   YHMCPN++ F+  ++++ G V M ++    + G    Q K
Sbjct: 504  SDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIK 554



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 40/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 677 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRK 731

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 732 VWPYFL-KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 781


>ref|NP_001065797.2| Os11g0157000 [Oryza sativa Japonica Group]
           gi|255679807|dbj|BAF27642.2| Os11g0157000 [Oryza sativa
           Japonica Group]
          Length = 1601

 Score = 92.8 bits (229), Expect(4) = 4e-46
 Identities = 57/142 (40%), Positives = 84/142 (59%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 399

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G+++E GL  LSK  LLD 
Sbjct: 400 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMTEIGLAELSKRGLLDG 459

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 460 QSIGKLKFCEHCIFGKHKRVKF 481



 Score = 75.5 bits (184), Expect(4) = 4e-46
 Identities = 43/108 (39%), Positives = 56/108 (51%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 513 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 572

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  V     QNGVAERMNRTI+ K RCL+ ++G+PK F
Sbjct: 573 SYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCLLSNAGLPKQF 620



 Score = 48.5 bits (114), Expect(4) = 4e-46
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+E+WSG P N  DLRV  C
Sbjct: 631 LINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGC 664



 Score = 37.4 bits (85), Expect(4) = 4e-46
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +   YHMCPN++ F+  ++++ G V M ++    + G    Q K
Sbjct: 297  SDQWILNTACIYHMCPNRDWFATYEAVQVGTVLMGDDTPCEVAGIGTVQIK 347



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 40/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 470 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGTRYMMTIVDDYSRK 524

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 525 VWPYFL-KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 574


>ref|XP_006651032.1| PREDICTED: uncharacterized protein LOC102707106 [Oryza brachyantha]
          Length = 1773

 Score = 96.7 bits (239), Expect(4) = 5e-46
 Identities = 59/139 (42%), Positives = 83/139 (59%), Gaps = 12/139 (8%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           G+ +I IK+FDG IRTLSDVR+   L+R LISL TL++ GY +          +G  VV+
Sbjct: 282 GVGTIQIKMFDGCIRTLSDVRHIPSLKRNLISLSTLDRKGYRYSGGDGILKVTKGSLVVM 341

Query: 766 K-EMEKSGLYSLIRETMCEFAALVTNH-GGSMLWNKRIGNISEKGL*YLSKENLLDSRKI 593
           K +++ + LY L   T+    A VT+    S LW+ R+G++SE GL  LSK  LLD + I
Sbjct: 342 KADIKNADLYHLQGTTIVGNVAAVTDSLSNSDLWHMRLGHMSEIGLAELSKRGLLDGQNI 401

Query: 592 HSLDFWSHCVLGKQYKLTF 536
             L F  HC+ GK  ++ F
Sbjct: 402 GKLKFCEHCIFGKHKRVKF 420



 Score = 68.9 bits (167), Expect(4) = 5e-46
 Identities = 38/108 (35%), Positives = 55/108 (50%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K + F    E KT+V  QT  K K       + F ++   
Sbjct: 452 YMMTIVDDYSRKVWPYFLKHKFEAFLVFKEWKTMVERQTERKVKVLRTDNGMEFCSRQFK 511

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  V     QNGV ERMNRTI+ K RC++ ++G+P+ F
Sbjct: 512 SYCRSEGIVRHYTVSHTPQQNGVVERMNRTIISKARCMLSNAGLPRRF 559



 Score = 47.8 bits (112), Expect(4) = 5e-46
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+E+WSG P N  DL+V  C
Sbjct: 570 LINRSPSYAIDKKTPIEMWSGSPANYSDLKVFGC 603



 Score = 40.4 bits (93), Expect(4) = 5e-46
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD W+  +G +YHMCPN++ F+  + ++ G V M +N    + G    Q K
Sbjct: 239  SDEWLLDTGCTYHMCPNRDWFTTYEPVQGGNVLMGDNTPCKVAGVGTIQIK 289



 Score = 59.7 bits (143), Expect = 2e-06
 Identities = 34/91 (37%), Positives = 55/91 (60%)
 Frame = -2

Query: 528 TYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRHACLGFLAKNKRSNF*KG**M 349
           T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR     FL K+K   F      
Sbjct: 424 THTTEGILDYVHSDLWGPARKRSFGGARYMMTIVDDYSRKVWPYFL-KHKFEAFLVFKEW 482

Query: 348 QNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
           + +  +  +R++KVLR DNG+EF ++ F  +
Sbjct: 483 KTMVERQTERKVKVLRTDNGMEFCSRQFKSY 513


>ref|NP_001172143.1| Os01g0116166 [Oryza sativa Japonica Group]
           gi|255672802|dbj|BAH90873.1| Os01g0116166 [Oryza sativa
           Japonica Group]
          Length = 778

 Score = 89.0 bits (219), Expect(4) = 2e-44
 Identities = 56/142 (39%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LIS  TL++ GY +          +G  VV+
Sbjct: 306 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISFCTLDRKGYKYSGGDGILKVTKGSLVVM 365

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G++SE GL  LSK  LL  
Sbjct: 366 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLYG 425

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 426 QSIGKLKFCEHCIFGKHKRVKF 447



 Score = 74.3 bits (181), Expect(4) = 2e-44
 Identities = 41/108 (37%), Positives = 56/108 (51%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 479 YIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 538

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  +     QNGVAERMNRTI+ K RC++ ++G+PK F
Sbjct: 539 SYCKSEGIVRHYTIPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQF 586



 Score = 48.1 bits (113), Expect(4) = 2e-44
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+E+WSG P N  DLRV  C
Sbjct: 597 LINRSPSYAIDKKTPIEVWSGSPVNYSDLRVFGC 630



 Score = 37.4 bits (85), Expect(4) = 2e-44
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  ++++ G V M ++    + G    Q K
Sbjct: 263  SDQWILDTACTYHMCPNRDWFATYETVQGGTVLMGDDTPCEVAGIGTVQIK 313



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 436 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRK 490

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 491 VWPYFL-KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 540


>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
          Length = 1334

 Score = 85.5 bits (210), Expect(4) = 3e-44
 Identities = 44/108 (40%), Positives = 65/108 (60%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y++ L+      VW+++L+ KDQ  +K    K+LV NQ++ K K       L F +K   
Sbjct: 503 YFMSLIDDYSRKVWIYILKIKDQALEKFKVWKSLVENQSDFKLKCLRTDNGLEFCSKVFE 562

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RHK VR    QNG+AERMNRT++DK RC++++S +P+ F
Sbjct: 563 EYCQKHGIKRHKTVRFTPQQNGLAERMNRTLVDKTRCMLINSKLPRSF 610



 Score = 72.0 bits (175), Expect(4) = 3e-44
 Identities = 44/127 (34%), Positives = 73/127 (57%), Gaps = 12/127 (9%)
 Frame = -1

Query: 880 VIRTLSDVRYFFVLRRTLISLGTLNKAGYTFR----------GFFVVVKEMEKSGLYSLI 731
           ++R+L +VR+   L+R LISLG L+  GY F+          G  +V+K + ++GLY L 
Sbjct: 345 LLRSLHEVRHAPRLKRNLISLGMLDSLGYFFKSRIGGLEVRKGTEIVMKGVNENGLYVLQ 404

Query: 730 RETMC--EFAALVTNHGGSMLWNKRIGNISEKGL*YLSKENLLDSRKIHSLDFWSHCVLG 557
             ++   E  + V+    + LW+ R+G++S KGL  LSK+ LL   +I  L+F  +C+ G
Sbjct: 405 GSSVPVQEGVSAVSEEDRTKLWHLRLGHMSIKGLQELSKQGLLGGDRIQQLEFCENCIFG 464

Query: 556 KQYKLTF 536
           K ++  F
Sbjct: 465 KSHRSKF 471



 Score = 48.9 bits (115), Expect(4) = 3e-44
 Identities = 21/34 (61%), Positives = 26/34 (76%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           L+NRSPS+ I FKTP ELW+G+P N  +LRV  C
Sbjct: 621 LVNRSPSSAIGFKTPEELWNGKPANYQNLRVFGC 654



 Score = 41.2 bits (95), Expect(4) = 3e-44
 Identities = 27/74 (36%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
 Frame = -2

Query: 1092 GSISPDVSCVSHSFAVSDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKG 913
            G  S D+   S+S      W+  SG S+H+CP K  F K ++++ G+V M NN    I G
Sbjct: 274  GYQSADLLVASNS-NTKGQWVIDSGCSFHLCPEKTLFYKYEAVDGGRVLMGNNNVCNIVG 332

Query: 912  -YDLFQ*KYLMELL 874
             +   + + LMELL
Sbjct: 333  IWFCKRSRCLMELL 346


>gb|AAT85194.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1241

 Score = 90.9 bits (224), Expect(4) = 6e-44
 Identities = 57/142 (40%), Positives = 83/142 (58%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTL DVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 249 GIGTVQIKMFDGCIRTLLDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 308

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G++SE GL  LSK  LLD 
Sbjct: 309 KADIKYANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDG 368

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 369 QSIGKLKFCEHCIFGKHKRVKF 390



 Score = 70.1 bits (170), Expect(4) = 6e-44
 Identities = 40/108 (37%), Positives = 54/108 (50%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       +   +K   
Sbjct: 422 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFK 481

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  V     QNGVAERMNRTI+ K RC++ ++ +PK F
Sbjct: 482 SYCKSEGIVRHYTVPHTPQQNGVAERMNRTIISKARCMLSNASLPKQF 529



 Score = 48.5 bits (114), Expect(4) = 6e-44
 Identities = 22/34 (64%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+E+WSG P N  DLRV  C
Sbjct: 540 LINRSPSYAIDKKTPIEVWSGSPANYSDLRVFGC 573



 Score = 37.4 bits (85), Expect(4) = 6e-44
 Identities = 17/51 (33%), Positives = 29/51 (56%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  ++++ G V M ++    + G    Q K
Sbjct: 206  SDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGTVQIK 256



 Score = 58.2 bits (139), Expect = 6e-06
 Identities = 39/111 (35%), Positives = 61/111 (54%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 379 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRK 433

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+E  +K F  +
Sbjct: 434 VWPYFL-KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMELCSKIFKSY 483


>emb|CAD41912.2| OSJNBa0033G05.13 [Oryza sativa Japonica Group]
          Length = 1181

 Score = 94.0 bits (232), Expect(4) = 1e-43
 Identities = 60/142 (42%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 340 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 399

Query: 766 KEMEKS-GLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K   KS  LY L   T+    A V    +N   + LW+ R+G++SE GL  LSK  LLD 
Sbjct: 400 KASIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDG 459

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 460 QSISKLKFCEHCIFGKHKRVKF 481



 Score = 72.8 bits (177), Expect(4) = 1e-43
 Identities = 41/108 (37%), Positives = 55/108 (50%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 513 YMMTIVDDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 572

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  V     QNGVAERMNR I+ K RC++ ++G+PK F
Sbjct: 573 SYCKSEGIVRHYTVPHTPQQNGVAERMNRIIISKARCMLSNAGLPKQF 620



 Score = 43.1 bits (100), Expect(4) = 1e-43
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS   N KTP+E+WSG P N  DL+V  C
Sbjct: 631 LINRSPSYA-NKKTPIEVWSGSPANYSDLKVFGC 663



 Score = 36.2 bits (82), Expect(4) = 1e-43
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  + ++ G V M ++    + G    Q K
Sbjct: 297  SDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 347



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 470 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYMMTIVDDYSRK 524

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 525 VWPYFL-KHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 574


>emb|CAN61630.1| hypothetical protein VITISV_003191 [Vitis vinifera]
          Length = 1208

 Score = 99.0 bits (245), Expect(3) = 1e-43
 Identities = 57/139 (41%), Positives = 82/139 (58%), Gaps = 12/139 (8%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           G  ++ IK +DG+ R L DVRY   L+R LISLG L+K+GYTF          RG   V+
Sbjct: 301 GTGTVRIKHYDGIERVLEDVRYIPELKRNLISLGMLDKSGYTFKSEPNSLRVARGSLTVM 360

Query: 766 KEMEKSGLYSLIRETMCEFAALVTNH--GGSMLWNKRIGNISEKGL*YLSKENLLDSRKI 593
           K   K+GLY+LI +T+    + V     G + LW++R+G+IS +GL  L K+ +L + K+
Sbjct: 361 KGTIKNGLYTLIGQTVTGKVSTVLKEDVGTTKLWHQRLGHISHRGLQELEKQGVLGNYKL 420

Query: 592 HSLDFWSHCVLGKQYKLTF 536
             L F  HCV GK  ++ F
Sbjct: 421 TDLPFCEHCVFGKATRVKF 439



 Score = 86.3 bits (212), Expect(3) = 1e-43
 Identities = 47/108 (43%), Positives = 63/108 (58%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y+L L+      VW++ L+ K +TF K  E K LV  QT+ K K       L F +    
Sbjct: 471 YFLTLIDDYSRKVWIYFLKNKSETFLKFKEWKILVETQTSRKVKKLRTDNGLEFLSNDFN 530

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
            LC   GI RH+ VR    QNG+AERMNRTI+++VRC++ SSG+ K F
Sbjct: 531 SLCQKEGIARHRTVRYTPQQNGLAERMNRTILERVRCMLSSSGLSKVF 578



 Score = 40.0 bits (92), Expect(3) = 1e-43
 Identities = 17/36 (47%), Positives = 25/36 (69%)
 Frame = -1

Query: 112 MNLINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           ++LINRSPS+ + FKTP E W+G+  +   L+V  C
Sbjct: 587 VHLINRSPSSALQFKTPQEKWTGKAADYQHLKVFGC 622



 Score = 63.2 bits (152), Expect = 2e-07
 Identities = 35/88 (39%), Positives = 54/88 (61%)
 Frame = -2

Query: 525 YKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRHACLGFLAKNKRSNF*KG**MQ 346
           +++ + LDY+H DL GP +VP+ G   Y L++++D+SR   + FL KNK   F K    +
Sbjct: 444 HETQNQLDYIHSDLWGPSRVPSIGGARYFLTLIDDYSRKVWIYFL-KNKSETFLKFKEWK 502

Query: 345 NLSLKPNQREIKVLRIDNGLEFRNKNFD 262
            L      R++K LR DNGLEF + +F+
Sbjct: 503 ILVETQTSRKVKKLRTDNGLEFLSNDFN 530


>gb|AAP54315.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1312

 Score = 94.0 bits (232), Expect(4) = 2e-43
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 375 GIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 434

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G++SE GL  LSK  LLD 
Sbjct: 435 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDG 494

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 495 QSIGKLKFCEHCIFGKHKRVKF 516



 Score = 66.2 bits (160), Expect(4) = 2e-43
 Identities = 38/108 (35%), Positives = 53/108 (49%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT +K K       + F +K   
Sbjct: 548 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFK 607

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI  H  V     QNGVAERMN  I+ K RC++ ++ +PK F
Sbjct: 608 SYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQF 655



 Score = 46.6 bits (109), Expect(4) = 2e-43
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS   + KTP+E+WSG P N  DLRV  C
Sbjct: 666 LINRSPSYATDKKTPIEVWSGSPANYSDLRVFGC 699



 Score = 38.5 bits (88), Expect(4) = 2e-43
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  ++L+ G V M ++    + G    Q K
Sbjct: 332  SDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIK 382


>gb|AAM91886.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1280

 Score = 94.0 bits (232), Expect(4) = 2e-43
 Identities = 58/142 (40%), Positives = 84/142 (59%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 375 GIGTVQIKMFDGYIRTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 434

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G++SE GL  LSK  LLD 
Sbjct: 435 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRELLDG 494

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 495 QSIGKLKFCEHCIFGKHKRVKF 516



 Score = 66.2 bits (160), Expect(4) = 2e-43
 Identities = 38/108 (35%), Positives = 53/108 (49%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT +K K       + F +K   
Sbjct: 548 YMMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTEKKVKILRTDNGMEFCSKIFK 607

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI  H  V     QNGVAERMN  I+ K RC++ ++ +PK F
Sbjct: 608 SYCKSEGIVHHYTVPHTPQQNGVAERMNMAIISKARCMLSNADLPKQF 655



 Score = 46.6 bits (109), Expect(4) = 2e-43
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS   + KTP+E+WSG P N  DLRV  C
Sbjct: 666 LINRSPSYATDKKTPIEVWSGSPANYSDLRVFGC 699



 Score = 38.5 bits (88), Expect(4) = 2e-43
 Identities = 18/51 (35%), Positives = 29/51 (56%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  ++L+ G V M ++    + G    Q K
Sbjct: 332  SDQWILDTAWTYHMCPNRDWFATYEALQGGTVLMGDDTPCEVAGIGTVQIK 382


>emb|CAJ86151.1| H0413E07.4 [Oryza sativa Indica Group]
          Length = 1205

 Score = 89.7 bits (221), Expect(4) = 2e-43
 Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL+  GY +          +G  VV+
Sbjct: 325 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVM 384

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G++SE GL  LS   LLD 
Sbjct: 385 KADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDG 444

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 445 QSIGKLKFCEHCIFGKHKRVKF 466



 Score = 74.7 bits (182), Expect(4) = 2e-43
 Identities = 42/108 (38%), Positives = 56/108 (51%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 498 YMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 557

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  V     QNGVAERMNRTI+ K RC++ ++G+PK F
Sbjct: 558 SYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQF 605



 Score = 44.3 bits (103), Expect(4) = 2e-43
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSP   I+ KTP+++WSG P N  DL+V  C
Sbjct: 616 LINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGC 649



 Score = 36.2 bits (82), Expect(4) = 2e-43
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  + ++ G V M ++    + G    Q K
Sbjct: 282  SDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 332



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 41/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IVND+SR 
Sbjct: 455 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRK 509

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 510 VWPYFL-KHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 559


>emb|CAJ86192.1| H0306F03.15 [Oryza sativa Indica Group]
          Length = 1037

 Score = 89.7 bits (221), Expect(4) = 2e-43
 Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK+FDG IRTLSDVR+   L+R+LISL TL+  GY +          +G  VV+
Sbjct: 157 GIGTVQIKMFDGCIRTLSDVRHIPNLKRSLISLCTLDCKGYKYSGGDGILKVTKGSLVVM 216

Query: 766 K-EMEKSGLYSLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V    +N   + LW+ R+G++SE GL  LS   LLD 
Sbjct: 217 KADIKSANLYHLQGTTILGNVATVSDSLSNSDATNLWHMRLGHMSEIGLAELSMRGLLDG 276

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 277 QSIGKLKFCEHCIFGKHKRVKF 298



 Score = 74.7 bits (182), Expect(4) = 2e-43
 Identities = 42/108 (38%), Positives = 56/108 (51%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 330 YMMTIVNDYSRKVWPYFLKHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 389

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  V     QNGVAERMNRTI+ K RC++ ++G+PK F
Sbjct: 390 SYCKSEGIMRHYTVPHTPQQNGVAERMNRTIISKARCMLSNAGLPKQF 437



 Score = 44.3 bits (103), Expect(4) = 2e-43
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSP   I+ KTP+++WSG P N  DL+V  C
Sbjct: 448 LINRSPGYAIDKKTPIKVWSGSPANYSDLKVFGC 481



 Score = 36.2 bits (82), Expect(4) = 2e-43
 Identities = 17/51 (33%), Positives = 28/51 (54%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  + ++ G V M ++    + G    Q K
Sbjct: 114  SDQWILDTACTYHMCPNRDWFATYEVVQGGTVLMGDDTPCEVAGIGTVQIK 164



 Score = 62.4 bits (150), Expect = 3e-07
 Identities = 41/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IVND+SR 
Sbjct: 287 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYMMTIVNDYSRK 341

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 342 VWPYFL-KHKYQAFNVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 391


>emb|CAD40363.2| OSJNBa0093P23.9 [Oryza sativa Japonica Group]
          Length = 944

 Score = 90.5 bits (223), Expect(4) = 3e-43
 Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI  + IK+FDG I TLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 172 GIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 231

Query: 766 K-EMEKSGLYSLIRETMCEFAALVT----NHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V+    N   + LW+ R+G++SE GL  LSK  LLD 
Sbjct: 232 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDG 291

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 292 QSIGKLKFCEHCIFGKHKRVKF 313



 Score = 69.7 bits (169), Expect(4) = 3e-43
 Identities = 41/108 (37%), Positives = 56/108 (51%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 345 YIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 404

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH   +    QNGVAERMNRTI+ K RC++ ++G+PK F
Sbjct: 405 SYCKSEGIVRHYTPQ----QNGVAERMNRTIISKARCMLSNAGLPKQF 448



 Score = 45.8 bits (107), Expect(4) = 3e-43
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+++WSG P N  DLRV  C
Sbjct: 459 LINRSPSYAIDKKTPIKVWSGFPANYSDLRVFGC 492



 Score = 38.5 bits (88), Expect(4) = 3e-43
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  ++++ G V M ++    + G  + Q K
Sbjct: 129  SDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIK 179



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 302 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRK 356

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 357 VWPYFL-KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 406


>emb|CAH66022.1| OSIGBa0105O19.1 [Oryza sativa Indica Group]
          Length = 944

 Score = 90.5 bits (223), Expect(4) = 3e-43
 Identities = 57/142 (40%), Positives = 82/142 (57%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI  + IK+FDG I TLSDVR+   L+R+LISL TL++ GY +          +G  VV+
Sbjct: 172 GIGIVQIKMFDGCISTLSDVRHIPNLKRSLISLCTLDRKGYKYSGGDGILKVTKGSLVVM 231

Query: 766 K-EMEKSGLYSLIRETMCEFAALVT----NHGGSMLWNKRIGNISEKGL*YLSKENLLDS 602
           K +++ + LY L   T+    A V+    N   + LW+ R+G++SE GL  LSK  LLD 
Sbjct: 232 KADIKSANLYHLRGTTILGNVAAVSDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDG 291

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
           + I  L F  HC+ GK  ++ F
Sbjct: 292 QSIGKLKFCEHCIFGKHKRVKF 313



 Score = 69.7 bits (169), Expect(4) = 3e-43
 Identities = 41/108 (37%), Positives = 56/108 (51%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 345 YIMTIVDDYSRKVWPYFLKHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 404

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH   +    QNGVAERMNRTI+ K RC++ ++G+PK F
Sbjct: 405 SYCKSEGIVRHYTPQ----QNGVAERMNRTIISKARCMLSNAGLPKQF 448



 Score = 45.8 bits (107), Expect(4) = 3e-43
 Identities = 21/34 (61%), Positives = 25/34 (73%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  I+ KTP+++WSG P N  DLRV  C
Sbjct: 459 LINRSPSYAIDKKTPIKVWSGFPANYSDLRVFGC 492



 Score = 38.5 bits (88), Expect(4) = 3e-43
 Identities = 17/51 (33%), Positives = 30/51 (58%)
 Frame = -2

Query: 1044 SDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKGYDLFQ*K 892
            SD WI  +  +YHMCPN++ F+  ++++ G V M ++    + G  + Q K
Sbjct: 129  SDQWILDTACTYHMCPNRDWFATYEAVQGGTVLMGDDTPCEVAGIGIVQIK 179



 Score = 60.5 bits (145), Expect = 1e-06
 Identities = 40/111 (36%), Positives = 62/111 (55%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP +  ++G   Y+++IV+D+SR 
Sbjct: 302 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPARKTSFGGARYIMTIVDDYSRK 356

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 357 VWPYFL-KHKYQAFDVFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 406


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 89.7 bits (221), Expect(3) = 1e-40
 Identities = 55/137 (40%), Positives = 83/137 (60%), Gaps = 10/137 (7%)
 Frame = -1

Query: 916  GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
            G  S+ IK++DG++RTL+   Y   LR+ LIS+GTL+K GYTF          +G  VV+
Sbjct: 659  GSGSVQIKMYDGLVRTLN-AWYVPGLRKNLISVGTLDKNGYTFSGSGGVLRVSKGALVVM 717

Query: 766  KEMEKSGLYSLIRETMCEFAALVTNHGGSMLWNKRIGNISEKGL*YLSKENLLDSRKIHS 587
            K   + G+Y+L+  ++   AA V     + LW++R+G++SEKGL  LSK+ LL   +   
Sbjct: 718  KGRLQHGIYTLMGSSVLGTAA-VEEDNCTELWHRRLGHMSEKGLSILSKQGLLSGAETGK 776

Query: 586  LDFWSHCVLGKQYKLTF 536
            L F   CV+GKQ ++ F
Sbjct: 777  LKFCETCVMGKQRRVKF 793



 Score = 77.0 bits (188), Expect(3) = 1e-40
 Identities = 41/108 (37%), Positives = 58/108 (53%)
 Frame = -3

Query: 440  YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
            YY+  +      VWV+ L+ KD+ F K  E KT+V  +T +  K       L F  K   
Sbjct: 825  YYVTFIDDFSRKVWVYFLKAKDEVFGKFKEWKTMVEKRTGKVVKTLRTDNGLEFCNKDFD 884

Query: 260  ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
              C   GI RH+ VR    QNGVAERMN+T++ + RC+ + +G+ K F
Sbjct: 885  EFCRKEGIVRHRTVRHTPQQNGVAERMNQTLVQRARCMRIDAGLSKKF 932



 Score = 48.9 bits (115), Expect(3) = 1e-40
 Identities = 20/34 (58%), Positives = 26/34 (76%)
 Frame = -1

Query: 106  LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
            L+NRSPST I+FKTP E+WSG+P N   L++  C
Sbjct: 943  LVNRSPSTAIDFKTPQEVWSGKPSNYSGLKIFGC 976



 Score = 60.1 bits (144), Expect = 2e-06
 Identities = 34/91 (37%), Positives = 53/91 (58%)
 Frame = -2

Query: 528  TYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRHACLGFLAKNKRSNF*KG**M 349
            ++ +  +L+Y+H DL GP  V ++    Y ++ ++DFSR   + FL K K   F K    
Sbjct: 797  SHTTNGVLEYIHSDLWGPSPVESHSGCRYYVTFIDDFSRKVWVYFL-KAKDEVFGKFKEW 855

Query: 348  QNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
            + +  K   + +K LR DNGLEF NK+FD+F
Sbjct: 856  KTMVEKRTGKVVKTLRTDNGLEFCNKDFDEF 886


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 75.9 bits (185), Expect(4) = 5e-37
 Identities = 42/108 (38%), Positives = 58/108 (53%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y++  +      VW++ LR KD+ F+K  E K +V NQ++ K K       L +      
Sbjct: 495 YFISFVDDYSRKVWIYFLRKKDEAFEKFVEWKKMVENQSDRKVKKLRTDNGLEYCNHYFE 554

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RHK       QNG+AER+NRTIMDKVR ++  SG+ K F
Sbjct: 555 KFCKEEGIVRHKTCAYTPQQNGIAERLNRTIMDKVRSMLSRSGMEKKF 602



 Score = 68.6 bits (166), Expect(4) = 5e-37
 Identities = 49/140 (35%), Positives = 72/140 (51%), Gaps = 13/140 (9%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTFR----------GFFVVV 767
           GI SI I+  DG    L+DVRY   + R LISLGTL   G  F+          G   ++
Sbjct: 325 GIGSIKIRNSDGSQVILTDVRYMPNMTRNLISLGTLEDRGCWFKSQDGILKIVKGCSTIL 384

Query: 766 KEMEKSGLYSL---IRETMCEFAALVTNHGGSMLWNKRIGNISEKGL*YLSKENLLDSRK 596
           K  ++  LY L     E     +A V +   + LW+ R+G++S+KG+  L K+  L    
Sbjct: 385 KGQKRDTLYILDGVTEEGESHSSAEVKDE--TALWHSRLGHMSQKGMEILVKKGCLRREV 442

Query: 595 IHSLDFWSHCVLGKQYKLTF 536
           I  L+F   CV GKQ++++F
Sbjct: 443 IKELEFCEDCVYGKQHRVSF 462



 Score = 40.0 bits (92), Expect(4) = 5e-37
 Identities = 17/46 (36%), Positives = 28/46 (60%)
 Frame = -2

Query: 1050 AVSDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKG 913
            ++++ W+  +G S+HM P K+ F   K L +G V M N+   P+KG
Sbjct: 280  SIANEWVLDTGCSFHMTPRKDWFKDFKELSSGYVKMGNDTYSPVKG 325



 Score = 38.9 bits (89), Expect(4) = 5e-37
 Identities = 19/34 (55%), Positives = 21/34 (61%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPST INF  P E W+G   +L  LR   C
Sbjct: 613 LINRSPSTAINFDLPEEKWTGALPDLSSLRKFGC 646


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 77.8 bits (190), Expect(4) = 1e-36
 Identities = 45/140 (32%), Positives = 77/140 (55%), Gaps = 11/140 (7%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTFRGFFVVVK--------- 764
           GI  + I++ DG++R L +VR+   L R LISL T+++ G+  +G   V+K         
Sbjct: 303 GIGMVKIRMHDGIVRALGNVRHTPGLNRNLISLSTMDRVGFWHKGQNGVLKVGKGQMVYM 362

Query: 763 --EMEKSGLYSLIRETMCEFAALVTNHGGSMLWNKRIGNISEKGL*YLSKENLLDSRKIH 590
              ++   +Y L   T+   A + T    + LW +R+G++S++GL  L K+  LD     
Sbjct: 363 KGAIQPDNMYKLTGSTVEGGAGVCTEEDKTELWRRRLGHMSQRGLQELHKKEQLDGVMSA 422

Query: 589 SLDFWSHCVLGKQYKLTFLL 530
           +L+F  +C LGKQ +++F L
Sbjct: 423 ALEFCRYCTLGKQTRVSFNL 442



 Score = 75.1 bits (183), Expect(4) = 1e-36
 Identities = 42/108 (38%), Positives = 60/108 (55%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y++  +      VW+F ++TK++ F K  E K  V NQT  K K         +  K  +
Sbjct: 474 YFVSFIDDFSRKVWIFFMKTKNEVFTKFKEWKAEVGNQTGRKIKCLRSDNGGEYRDKKFL 533

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
            LC   GITRH  V+ +  QNGVAERMNRT+M+K R +   +G+P+ F
Sbjct: 534 QLCKDEGITRHFTVKKSPQQNGVAERMNRTLMEKERSMRFHAGLPEEF 581



 Score = 43.5 bits (101), Expect(4) = 1e-36
 Identities = 20/35 (57%), Positives = 25/35 (71%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWCA 2
           LINRSPS  INFK   E+WSG+P +  +LRV  C+
Sbjct: 592 LINRSPSRAINFKCAEEVWSGKPVDYSNLRVFGCS 626



 Score = 25.4 bits (54), Expect(4) = 1e-36
 Identities = 13/55 (23%), Positives = 24/55 (43%)
 Frame = -2

Query: 1077 DVSCVSHSFAVSDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKG 913
            ++  +S S     +W   +  ++H C +++ F   K   T  V M N+    I G
Sbjct: 249  ELLAISTSSGAPRHWTLDTACTFHTCAHRDWFDTYKEGNTRSVLMGNDSPSRIMG 303


>gb|AAT44282.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1243

 Score = 85.9 bits (211), Expect(3) = 4e-36
 Identities = 54/132 (40%), Positives = 79/132 (59%), Gaps = 5/132 (3%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTFRGFFVVVK-EMEKSGLY 740
           GI ++ IK+FDG IRTLSDV++   L+R+LISL  + K     +G  VV+K +++ + LY
Sbjct: 325 GIGTVQIKMFDGCIRTLSDVQHIPNLKRSLISLYGILKVT---KGSLVVMKVDIKSANLY 381

Query: 739 SLIRETMCEFAALV----TNHGGSMLWNKRIGNISEKGL*YLSKENLLDSRKIHSLDFWS 572
            L   T+    A V    +N   + LW+ R+G++SE GL  LSK  LLD + I  L F  
Sbjct: 382 HLRGTTILGNVAAVFDSLSNSDATNLWHMRLGHMSEIGLAELSKRGLLDGQSIRKLKFCE 441

Query: 571 HCVLGKQYKLTF 536
           HC+ GK  ++ F
Sbjct: 442 HCIFGKHKRVKF 453



 Score = 67.4 bits (163), Expect(3) = 4e-36
 Identities = 39/108 (36%), Positives = 53/108 (49%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y + ++      VW + L+ K Q F    E KT+V  QT  K K       + F +K   
Sbjct: 485 YMMTIVDDYSRKVWPYFLKHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEFCSKIFK 544

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI  H        QN VAERMNRTI+ K RC++ ++G+PK F
Sbjct: 545 SYCKSEGIVCHYTAPHTPQQNDVAERMNRTIISKARCMLSNAGLPKQF 592



 Score = 47.0 bits (110), Expect(3) = 4e-36
 Identities = 21/34 (61%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSP   I+ KTP+E+WSG P N  DLRV  C
Sbjct: 603 LINRSPGYAIDKKTPIEVWSGSPTNYSDLRVFGC 636



 Score = 59.3 bits (142), Expect = 3e-06
 Identities = 40/111 (36%), Positives = 61/111 (54%)
 Frame = -2

Query: 588 HLIFGVTVF*ENNIS*LFCCTYKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRH 409
           H IFG     + N S     T+ +  ILDYVH DL GP    ++G   Y+++IV+D+SR 
Sbjct: 442 HCIFGKHKRVKFNTS-----THTTEGILDYVHSDLWGPAHKTSFGGARYMMTIVDDYSRK 496

Query: 408 ACLGFLAKNKRSNF*KG**MQNLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
               FL K+K   F      + +  +  +R++K+LR DNG+EF +K F  +
Sbjct: 497 VWPYFL-KHKYQAFDGFKEWKTMVERQTERKVKILRTDNGMEFCSKIFKSY 546


>gb|ACL97387.1| Gag-Pol polyprotein [Lotus japonicus]
          Length = 1305

 Score = 87.0 bits (214), Expect(4) = 1e-35
 Identities = 51/141 (36%), Positives = 85/141 (60%), Gaps = 14/141 (9%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTF----------RGFFVVV 767
           GI ++ IK++DG IRTL +VR+   L + L+S+G L+  GY +          +G  VV+
Sbjct: 331 GIGTVKIKMYDGTIRTLQEVRHVKELAKNLLSVGQLDDLGYKYDIQGGILKVVKGSLVVM 390

Query: 766 KEME-KSGLYSLIRET--MCEFAALV-TNHGGSMLWNKRIGNISEKGL*YLSKENLLDSR 599
           K  +  + LY L+ +T  M + +  V +    +M+W++R+G++SE+GL  L++ NL+   
Sbjct: 391 KAKKVAANLYMLLGDTWQMADASVAVGSQEETTMMWHRRLGHMSERGLKVLAERNLIPGL 450

Query: 598 KIHSLDFWSHCVLGKQYKLTF 536
           K  SL F  HCV+ KQ++L F
Sbjct: 451 KSVSLPFCEHCVISKQHRLKF 471



 Score = 51.6 bits (122), Expect(4) = 1e-35
 Identities = 30/108 (27%), Positives = 52/108 (48%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y++  +      +WV+ ++ K   +    E K  V  +T ++ K         +     +
Sbjct: 502 YFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFL 561

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GITR   V     QNGVAERMNRT++++ R ++ ++G+ K F
Sbjct: 562 AFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSF 609



 Score = 44.7 bits (104), Expect(4) = 1e-35
 Identities = 19/34 (55%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           +INRSPST I  KTP+E+W G+P +   LRV  C
Sbjct: 620 VINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGC 653



 Score = 35.4 bits (80), Expect(4) = 1e-35
 Identities = 16/45 (35%), Positives = 25/45 (55%)
 Frame = -2

Query: 1047 VSDYWIFYSG*SYHMCPNKN*FSKLKSLETGKVFMENNECYPIKG 913
            ++D WI  SG ++HM P ++ F   + +  G VFM N+    I G
Sbjct: 287  LTDVWIVDSGATWHMTPRRDWFCTYEPVSEGNVFMGNDHALEIVG 331


>gb|ABA97637.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1278

 Score = 78.2 bits (191), Expect(4) = 2e-35
 Identities = 54/142 (38%), Positives = 73/142 (51%), Gaps = 15/142 (10%)
 Frame = -1

Query: 916 GIRSISIKIFDGVIRTLSDVRYFFVLRRTLISLGTLNKAGYTFRGFFVVVK--------- 764
           GI S+ IK  DG+ RTL DVR+   + R LISL TL+  GY + G   VVK         
Sbjct: 333 GIGSVQIKTHDGITRTLKDVRHIPGMARNLISLSTLDAEGYKYSGSGGVVKVSKGSLVYM 392

Query: 763 --EMEKSGLYSLIRETM--CEFAALVTNH--GGSMLWNKRIGNISEKGL*YLSKENLLDS 602
             +M  + LY L   T+     AA VT      + LW+ R+G++SE G+  L K NLLD 
Sbjct: 393 IGDMNSANLYVLRGSTLHGSVTAAAVTKDEPNKTNLWHMRLGHMSELGMAELMKRNLLDG 452

Query: 601 RKIHSLDFWSHCVLGKQYKLTF 536
               ++ F   CV GK  ++ F
Sbjct: 453 CTQGNMKFCERCVFGKHKRVKF 474



 Score = 64.7 bits (156), Expect(4) = 2e-35
 Identities = 37/108 (34%), Positives = 53/108 (49%)
 Frame = -3

Query: 440 YYLLLMIFLDMHVWVFLLRTKDQTFKKVNECKTLV*NQTNEK*KF*ELIMVLSFATKTLM 261
           Y L ++      VW + L+ KD TF    E K ++  QT ++ K         F +    
Sbjct: 506 YMLTIIDDYSRKVWPYFLKHKDDTFAAFKEWKVMIERQTEKEVKVLRTDNAGEFCSDAFD 565

Query: 260 ILCA*CGITRHKIVRCNAPQNGVAERMNRTIMDKVRCLIVSSGVPKPF 117
             C   GI RH  +     QNGVAERMNRTI+ K RC++ ++ + K F
Sbjct: 566 DYCRKEGIVRHHTIPYTPQQNGVAERMNRTIISKARCMLSNARMNKRF 613



 Score = 45.1 bits (105), Expect(4) = 2e-35
 Identities = 20/34 (58%), Positives = 24/34 (70%)
 Frame = -1

Query: 106 LINRSPSTTINFKTPVELWSGEPQNL*DLRVLWC 5
           LINRSPS  +N KTP+E+WSG P +   LRV  C
Sbjct: 624 LINRSPSIPLNKKTPIEIWSGMPADYSQLRVFGC 657



 Score = 29.6 bits (65), Expect(4) = 2e-35
 Identities = 20/68 (29%), Positives = 33/68 (48%)
 Frame = -2

Query: 1134 ITRAKQTKRVYNNGGSISPDVSCVSHSFAVSDYWIFYSG*SYHMCPNKN*FSKLKSLETG 955
            +T AK +    ++G  +     CV    A  D WI  +  S+H+  N++ FS  KS++ G
Sbjct: 267  VTSAKNS----DSGDCLVVFAGCV----ASHDEWILDTACSFHIYINRDWFSSYKSVQNG 318

Query: 954  KVFMENNE 931
             V    N+
Sbjct: 319  DVVRMGND 326



 Score = 61.2 bits (147), Expect = 7e-07
 Identities = 35/90 (38%), Positives = 54/90 (60%)
 Frame = -2

Query: 525 YKSTSILDYVHCDL*GPKKVPTYGINVYLLSIVNDFSRHACLGFLAKNKRSNF*KG**MQ 346
           +++  ILDYVH DL GP + P+ G   Y+L+I++D+SR     FL K+K   F      +
Sbjct: 479 HRTKGILDYVHADLWGPSRKPSLGGARYMLTIIDDYSRKVWPYFL-KHKDDTFAAFKEWK 537

Query: 345 NLSLKPNQREIKVLRIDNGLEFRNKNFDDF 256
            +  +  ++E+KVLR DN  EF +  FDD+
Sbjct: 538 VMIERQTEKEVKVLRTDNAGEFCSDAFDDY 567