BLASTX nr result
ID: Catharanthus23_contig00030317
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030317
(573 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutr... 320 2e-85
ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 318 5e-85
ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citr... 318 5e-85
ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citr... 318 5e-85
ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citr... 318 5e-85
emb|CBI27412.3| unnamed protein product [Vitis vinifera] 317 1e-84
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi... 317 1e-84
gb|ESW28387.1| hypothetical protein PHAVU_003G282700g [Phaseolus... 317 2e-84
ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S... 317 2e-84
ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 316 2e-84
ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, ch... 316 3e-84
sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymeras... 315 4e-84
emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicoti... 315 4e-84
ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 315 7e-84
ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 315 7e-84
ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, m... 315 7e-84
gb|EXB77633.1| DNA-directed RNA polymerase 2B [Morus notabilis] 314 9e-84
ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/... 314 9e-84
dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymer... 314 1e-83
ref|XP_006384250.1| hypothetical protein POPTR_0004s11050g [Popu... 314 1e-83
>ref|XP_006400090.1| hypothetical protein EUTSA_v10012544mg [Eutrema salsugineum]
gi|557101180|gb|ESQ41543.1| hypothetical protein
EUTSA_v10012544mg [Eutrema salsugineum]
Length = 1030
Score = 320 bits (819), Expect = 2e-85
Identities = 150/188 (79%), Positives = 167/188 (88%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QLK VFEAL+TLGSTKWR+NKRVL+V+D+IW+ GG ADLVDR+D+PLP +PDTEDE++L
Sbjct: 503 QLKPVFEALDTLGSTKWRVNKRVLTVVDRIWSSGGCTADLVDRSDVPLPEKPDTEDESIL 562
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
ENSERHSQRCDIELKLSVARKMKDEEGF+YPHN+DFRGRAYPM PHLN
Sbjct: 563 KKWKFEIRSAKKENSERHSQRCDIELKLSVARKMKDEEGFYYPHNIDFRGRAYPMPPHLN 622
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRG+LEFAEGRPLG+SGL WLKIHLANL+A GVDKLSHE RLAFTENHLDDIFD
Sbjct: 623 HLGSDLCRGVLEFAEGRPLGRSGLRWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIFD 682
Query: 548 SADRPLEG 571
SADRPLEG
Sbjct: 683 SADRPLEG 690
>ref|XP_006482458.1| PREDICTED: DNA-directed RNA polymerase 2,
chloroplastic/mitochondrial-like [Citrus sinensis]
Length = 1026
Score = 318 bits (816), Expect = 5e-85
Identities = 152/189 (80%), Positives = 167/189 (88%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
KQL+ VFEAL+TLG+TKWR+N RVLSV+D+IW+ GGRLADLVDRND+PLP +P+TEDEA
Sbjct: 498 KQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQ 557
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L EN ERHSQRCDIELKLSVARKMKDEEGF+YPHNVDFRGRAYPMHP+L
Sbjct: 558 LRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYL 617
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGR LGKSGL WLKIHLANL+A GVDKLSHE RLAFTENHLDDIF
Sbjct: 618 NHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIF 677
Query: 545 DSADRPLEG 571
DSAD+PLEG
Sbjct: 678 DSADKPLEG 686
>ref|XP_006430989.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533046|gb|ESR44229.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 928
Score = 318 bits (816), Expect = 5e-85
Identities = 152/189 (80%), Positives = 167/189 (88%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
KQL+ VFEAL+TLG+TKWR+N RVLSV+D+IW+ GGRLADLVDRND+PLP +P+TEDEA
Sbjct: 502 KQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQ 561
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L EN ERHSQRCDIELKLSVARKMKDEEGF+YPHNVDFRGRAYPMHP+L
Sbjct: 562 LRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYL 621
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGR LGKSGL WLKIHLANL+A GVDKLSHE RLAFTENHLDDIF
Sbjct: 622 NHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIF 681
Query: 545 DSADRPLEG 571
DSAD+PLEG
Sbjct: 682 DSADKPLEG 690
>ref|XP_006430988.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533045|gb|ESR44228.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 1030
Score = 318 bits (816), Expect = 5e-85
Identities = 152/189 (80%), Positives = 167/189 (88%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
KQL+ VFEAL+TLG+TKWR+N RVLSV+D+IW+ GGRLADLVDRND+PLP +P+TEDEA
Sbjct: 502 KQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQ 561
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L EN ERHSQRCDIELKLSVARKMKDEEGF+YPHNVDFRGRAYPMHP+L
Sbjct: 562 LRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYL 621
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGR LGKSGL WLKIHLANL+A GVDKLSHE RLAFTENHLDDIF
Sbjct: 622 NHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIF 681
Query: 545 DSADRPLEG 571
DSAD+PLEG
Sbjct: 682 DSADKPLEG 690
>ref|XP_006430987.1| hypothetical protein CICLE_v10010966mg [Citrus clementina]
gi|557533044|gb|ESR44227.1| hypothetical protein
CICLE_v10010966mg [Citrus clementina]
Length = 933
Score = 318 bits (816), Expect = 5e-85
Identities = 152/189 (80%), Positives = 167/189 (88%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
KQL+ VFEAL+TLG+TKWR+N RVLSV+D+IW+ GGRLADLVDRND+PLP +P+TEDEA
Sbjct: 502 KQLEPVFEALDTLGNTKWRVNNRVLSVLDRIWSCGGRLADLVDRNDVPLPEKPETEDEAQ 561
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L EN ERHSQRCDIELKLSVARKMKDEEGF+YPHNVDFRGRAYPMHP+L
Sbjct: 562 LRKWQWKVRNVKKENRERHSQRCDIELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPYL 621
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGR LGKSGL WLKIHLANL+A GVDKLSHE RLAFTENHLDDIF
Sbjct: 622 NHLGSDLCRGILEFAEGRTLGKSGLHWLKIHLANLYAGGVDKLSHEGRLAFTENHLDDIF 681
Query: 545 DSADRPLEG 571
DSAD+PLEG
Sbjct: 682 DSADKPLEG 690
>emb|CBI27412.3| unnamed protein product [Vitis vinifera]
Length = 810
Score = 317 bits (812), Expect = 1e-84
Identities = 150/189 (79%), Positives = 166/189 (87%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
K L+ FEALNTLG+TKWRINKRVL VID+IWA GGRLADLVDR D+PLP +PDTEDEA
Sbjct: 282 KALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAE 341
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
+ ENSERHSQRCDIELKL+VARKMKDE+GFFYPHN+DFRGRAYPMHP+L
Sbjct: 342 IRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYL 401
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGRPLGKSGL WLKIHLAN++A GVDKLS+E R+AFTENHL+DIF
Sbjct: 402 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIF 461
Query: 545 DSADRPLEG 571
DSADRPLEG
Sbjct: 462 DSADRPLEG 470
>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
vinifera]
Length = 978
Score = 317 bits (812), Expect = 1e-84
Identities = 150/189 (79%), Positives = 166/189 (87%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
K L+ FEALNTLG+TKWRINKRVL VID+IWA GGRLADLVDR D+PLP +PDTEDEA
Sbjct: 450 KALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGRLADLVDREDVPLPEEPDTEDEAE 509
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
+ ENSERHSQRCDIELKL+VARKMKDE+GFFYPHN+DFRGRAYPMHP+L
Sbjct: 510 IRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYL 569
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGRPLGKSGL WLKIHLAN++A GVDKLS+E R+AFTENHL+DIF
Sbjct: 570 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYAGGVDKLSYEGRVAFTENHLEDIF 629
Query: 545 DSADRPLEG 571
DSADRPLEG
Sbjct: 630 DSADRPLEG 638
>gb|ESW28387.1| hypothetical protein PHAVU_003G282700g [Phaseolus vulgaris]
Length = 959
Score = 317 bits (811), Expect = 2e-84
Identities = 150/188 (79%), Positives = 167/188 (88%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL VFEALNTLGSTKWR+NKRVL V+D+IWA+GGRLADLVDR+D+PLP +PDTEDEA +
Sbjct: 432 QLDPVFEALNTLGSTKWRVNKRVLCVMDQIWANGGRLADLVDRDDVPLPEEPDTEDEAEV 491
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
EN+ERHSQRCDIELKL+VARKMKDEEGF+YPHN+DFRGRAYPMHP+LN
Sbjct: 492 RKWKWKVKTVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 551
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRGILEFAEGRPLGKSGL WLKIHLANL+A GVDKLS+ R+AFTENHLDDIFD
Sbjct: 552 HLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYNDRIAFTENHLDDIFD 611
Query: 548 SADRPLEG 571
SADRPLEG
Sbjct: 612 SADRPLEG 619
>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
gi|241924412|gb|EER97556.1| hypothetical protein
SORBIDRAFT_02g039520 [Sorghum bicolor]
Length = 976
Score = 317 bits (811), Expect = 2e-84
Identities = 145/189 (76%), Positives = 169/189 (89%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
+Q++ VFEALNTLGSTKWR+NKRVLS++D+IW+ GGRLADLVDR D+PLP +PDTEDE +
Sbjct: 448 EQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRTDVPLPEKPDTEDETL 507
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
+ ENSERHSQRCD+ELKL+VARKMKDEEGF+YPHN+DFRGRAYPMHP+L
Sbjct: 508 IKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 567
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGRPLGKSGL WLKIHLANL+A GVDKLS++ R+AFTENHL++IF
Sbjct: 568 NHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVDKLSYDGRVAFTENHLEEIF 627
Query: 545 DSADRPLEG 571
DSADRPLEG
Sbjct: 628 DSADRPLEG 636
>ref|XP_004232127.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial-like [Solanum lycopersicum]
Length = 1022
Score = 316 bits (810), Expect = 2e-84
Identities = 150/188 (79%), Positives = 165/188 (87%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL+ VFEAL+TLGSTKWRINKRVLSV+D+IWA GGRLADLVDR+D+PLP +PDTEDEAV
Sbjct: 495 QLQPVFEALDTLGSTKWRINKRVLSVVDRIWAGGGRLADLVDRDDVPLPEEPDTEDEAVC 554
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
EN ERHSQRCDIELKL+VA +MKDEEGFFYPHNVDFRGRAYPMHPHLN
Sbjct: 555 TKWRWKVKSVKKENRERHSQRCDIELKLAVAHRMKDEEGFFYPHNVDFRGRAYPMHPHLN 614
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRG+LEFA GRPLGKSGL WLKIHLANLFA GVDKLS + R+AFTE+HLDDIFD
Sbjct: 615 HLGSDICRGVLEFAAGRPLGKSGLRWLKIHLANLFAGGVDKLSLDGRIAFTESHLDDIFD 674
Query: 548 SADRPLEG 571
SAD+PLEG
Sbjct: 675 SADKPLEG 682
>ref|XP_002278535.1| PREDICTED: DNA-directed RNA polymerase 2, chloroplastic/mitochondrial
[Vitis vinifera] gi|298204431|emb|CBI16911.3| unnamed
protein product [Vitis vinifera]
Length = 1035
Score = 316 bits (809), Expect = 3e-84
Identities = 150/188 (79%), Positives = 163/188 (86%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL+ VFEALNTLG+TKWRINKR+ V+D+IWA GG LADLVDRND+PLP +PDTEDEA L
Sbjct: 508 QLEPVFEALNTLGNTKWRINKRLFDVVDRIWAGGGCLADLVDRNDVPLPEKPDTEDEAQL 567
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
NSERHSQRCDIELKL+VARKMKDE+GFFYPHN+DFRGRAYPMHP+LN
Sbjct: 568 RKWKWKVKSVKKANSERHSQRCDIELKLAVARKMKDEDGFFYPHNLDFRGRAYPMHPYLN 627
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRGILEFAEGRPLG SGL WLKIHLANLFA GVDKLSHE R+ FTENHLDDIFD
Sbjct: 628 HLGSDLCRGILEFAEGRPLGSSGLHWLKIHLANLFAGGVDKLSHEGRITFTENHLDDIFD 687
Query: 548 SADRPLEG 571
SADRPLEG
Sbjct: 688 SADRPLEG 695
>sp|Q8L6J3.2|RPO2B_TOBAC RecName: Full=DNA-directed RNA polymerase 2B,
chloroplastic/mitochondrial; AltName:
Full=NictaRpoT2-tom; AltName: Full=T7 bacteriophage-type
single subunit RNA polymerase 2B; Flags: Precursor
gi|21425665|emb|CAC95020.1| mitochondrial and chloroplast
RNA polymerase [Nicotiana tabacum]
Length = 1021
Score = 315 bits (808), Expect = 4e-84
Identities = 151/188 (80%), Positives = 165/188 (87%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL+ VFEAL+TLGSTKWRINKRVLSVID+IWA GGRLADLVDR+D PLP +PDTEDEA+
Sbjct: 494 QLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALR 553
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
EN ERHSQRCDIELKL+VARKMKDEEGFFYPHNVDFRGRAYPMHPHLN
Sbjct: 554 TKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 613
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRG+L FAEGRPLG+SGL WLKIHLANLFA GV+KLS E R+AFTENH+DDIFD
Sbjct: 614 HLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFD 673
Query: 548 SADRPLEG 571
SAD+PLEG
Sbjct: 674 SADKPLEG 681
>emb|CAC95024.1| mitochondrial and plastid RNA polymerase [Nicotiana tabacum]
Length = 562
Score = 315 bits (808), Expect = 4e-84
Identities = 151/188 (80%), Positives = 165/188 (87%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL+ VFEAL+TLGSTKWRINKRVLSVID+IWA GGRLADLVDR+D PLP +PDTEDEA+
Sbjct: 190 QLQPVFEALDTLGSTKWRINKRVLSVIDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALR 249
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
EN ERHSQRCDIELKL+VARKMKDEEGFFYPHNVDFRGRAYPMHPHLN
Sbjct: 250 TKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 309
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRG+L FAEGRPLG+SGL WLKIHLANLFA GV+KLS E R+AFTENH+DDIFD
Sbjct: 310 HLGSDICRGVLVFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIAFTENHMDDIFD 369
Query: 548 SADRPLEG 571
SAD+PLEG
Sbjct: 370 SADKPLEG 377
>ref|XP_006660444.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X2 [Oryza brachyantha]
Length = 839
Score = 315 bits (806), Expect = 7e-84
Identities = 145/189 (76%), Positives = 169/189 (89%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
+Q++ VFEAL+TLGSTKWR+NKRVLS++D+IW+ GGRLADLVDR+D+ LP +PDTEDEA
Sbjct: 311 EQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAK 370
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L ENSERHSQRCD+ELKL+VARKMKDEEGF+YPHN+DFRGRAYPMHP+L
Sbjct: 371 LKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 430
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRG+LEFAEGRPLGKSGL WLKIHLANL+A GVDKLS++ R+AFTENHL+DIF
Sbjct: 431 NHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIF 490
Query: 545 DSADRPLEG 571
DSADRPLEG
Sbjct: 491 DSADRPLEG 499
>ref|XP_006660443.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
isoform X1 [Oryza brachyantha]
Length = 703
Score = 315 bits (806), Expect = 7e-84
Identities = 145/189 (76%), Positives = 169/189 (89%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
+Q++ VFEAL+TLGSTKWR+NKRVLS++D+IW+ GGRLADLVDR+D+ LP +PDTEDEA
Sbjct: 284 EQMQSVFEALDTLGSTKWRVNKRVLSIVDRIWSSGGRLADLVDRSDVALPEKPDTEDEAK 343
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L ENSERHSQRCD+ELKL+VARKMKDEEGF+YPHN+DFRGRAYPMHP+L
Sbjct: 344 LKKWRWNLKAAKKENSERHSQRCDVELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 403
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRG+LEFAEGRPLGKSGL WLKIHLANL+A GVDKLS++ R+AFTENHL+DIF
Sbjct: 404 NHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSYDGRIAFTENHLEDIF 463
Query: 545 DSADRPLEG 571
DSADRPLEG
Sbjct: 464 DSADRPLEG 472
>ref|XP_003531932.1| PREDICTED: DNA-directed RNA polymerase 1B, mitochondrial-like
[Glycine max]
Length = 949
Score = 315 bits (806), Expect = 7e-84
Identities = 147/188 (78%), Positives = 166/188 (88%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL VFEALNTLGSTKWR+NKRVL VID+IWA+GGRLADLVDR ++P P +PDT+DEA +
Sbjct: 422 QLDPVFEALNTLGSTKWRVNKRVLCVIDQIWANGGRLADLVDRENVPEPKEPDTKDEAEI 481
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
EN+ERHSQRCDIELKL+VARKMKDEEGF+YPHN+DFRGRAYPMHP+LN
Sbjct: 482 RKWKWKVKAVKKENNERHSQRCDIELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYLN 541
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRGILEF+EGRPLGKSGLCWLKIHLANL+A GVDKLS++ R+ FTENHLDDIFD
Sbjct: 542 HLGSDLCRGILEFSEGRPLGKSGLCWLKIHLANLYAGGVDKLSYDGRIEFTENHLDDIFD 601
Query: 548 SADRPLEG 571
SADRPLEG
Sbjct: 602 SADRPLEG 609
>gb|EXB77633.1| DNA-directed RNA polymerase 2B [Morus notabilis]
Length = 1093
Score = 314 bits (805), Expect = 9e-84
Identities = 148/189 (78%), Positives = 164/189 (86%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
+QL+ VFEAL+TLG TKWRINKRVL V+++IWA GGRL DLVDR+D+PLP +PDTEDEA+
Sbjct: 485 EQLEPVFEALDTLGHTKWRINKRVLDVVERIWAGGGRLGDLVDRDDVPLPEKPDTEDEAL 544
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L E ERHSQRCD ELKLSVARKMKDEEGF+YPHNVDFRGRAYPMHPHL
Sbjct: 545 LKKWKWEVRSVRKETRERHSQRCDTELKLSVARKMKDEEGFYYPHNVDFRGRAYPMHPHL 604
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGRPLGKSGL WLKIHLANL+A GVDKLSHE R+AF ENHLD+IF
Sbjct: 605 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLYAGGVDKLSHEGRIAFVENHLDEIF 664
Query: 545 DSADRPLEG 571
DSADRP+EG
Sbjct: 665 DSADRPIEG 673
>ref|XP_002533595.1| DNA-directed RNA polymerase 2B, chloroplast/mitochondrial
precursor, putative [Ricinus communis]
gi|223526524|gb|EEF28786.1| DNA-directed RNA polymerase
2B, chloroplast/mitochondrial precursor, putative
[Ricinus communis]
Length = 589
Score = 314 bits (805), Expect = 9e-84
Identities = 147/189 (77%), Positives = 166/189 (87%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
+QL+ VFEAL+TLGSTKWRINKR+L V+D+IW GGRL DLVDRND+PLP +P+TEDEA+
Sbjct: 61 EQLQPVFEALDTLGSTKWRINKRILGVVDRIWNSGGRLGDLVDRNDVPLPEKPETEDEAL 120
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
+ EN ERHSQRCD ELKL+VARKMKDEEGF+YPHN+DFRGRAYPMHP+L
Sbjct: 121 VRKWKWKLRAAKKENRERHSQRCDTELKLAVARKMKDEEGFYYPHNLDFRGRAYPMHPYL 180
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGRPLGKSGL WLKIHLANLFA GVDKLS++ R+AFTENHLDDIF
Sbjct: 181 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFAGGVDKLSYDGRIAFTENHLDDIF 240
Query: 545 DSADRPLEG 571
DSADRPLEG
Sbjct: 241 DSADRPLEG 249
>dbj|BAB78464.1| T7 bacteriophage-type single subunit RNA polymerase [Nicotiana
sylvestris] gi|17221595|dbj|BAB78465.1| T7
bacteriophage-type single subunit RNA polymerase
[Nicotiana sylvestris]
Length = 1020
Score = 314 bits (804), Expect = 1e-83
Identities = 148/188 (78%), Positives = 165/188 (87%)
Frame = +2
Query: 8 QLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAVL 187
QL+ VFEAL+TLG+TKWRINKRVLSV+D+IWA GGRLADLVDR+D PLP +PDTEDEA+L
Sbjct: 493 QLQPVFEALDTLGNTKWRINKRVLSVVDRIWAGGGRLADLVDRDDAPLPEEPDTEDEALL 552
Query: 188 XXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHLN 367
EN ERHSQRCDIELKL+VARKMKDEE FFYPHNVDFRGRAYPMHPHLN
Sbjct: 553 PKWRWKVKSVKKENRERHSQRCDIELKLAVARKMKDEESFFYPHNVDFRGRAYPMHPHLN 612
Query: 368 HLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIFD 547
HLGSD+CRG+LEFAEGRPLG+SGL WLKIHLANLFA GV+KLS E R+ FTENH+DDIFD
Sbjct: 613 HLGSDICRGVLEFAEGRPLGESGLRWLKIHLANLFAGGVEKLSLEGRIGFTENHMDDIFD 672
Query: 548 SADRPLEG 571
S+D+PLEG
Sbjct: 673 SSDKPLEG 680
>ref|XP_006384250.1| hypothetical protein POPTR_0004s11050g [Populus trichocarpa]
gi|550340796|gb|ERP62047.1| hypothetical protein
POPTR_0004s11050g [Populus trichocarpa]
Length = 430
Score = 314 bits (804), Expect = 1e-83
Identities = 147/189 (77%), Positives = 169/189 (89%)
Frame = +2
Query: 5 KQLKQVFEALNTLGSTKWRINKRVLSVIDKIWADGGRLADLVDRNDIPLPGQPDTEDEAV 184
KQL+ VFEAL+TLG+TKWR+NKRVLSV+D+IW +GGRLADLVDR+D+PLP +P+TEDEA+
Sbjct: 19 KQLQLVFEALDTLGNTKWRVNKRVLSVVDRIWNNGGRLADLVDRSDVPLPEKPETEDEAL 78
Query: 185 LXXXXXXXXXXXXENSERHSQRCDIELKLSVARKMKDEEGFFYPHNVDFRGRAYPMHPHL 364
L EN ERHS+RCD ELK++VARKMK+EEGF+YPHN+DFRGRAYPMHP+L
Sbjct: 79 LKKWKWKVKSVKKENRERHSRRCDTELKIAVARKMKNEEGFYYPHNLDFRGRAYPMHPYL 138
Query: 365 NHLGSDVCRGILEFAEGRPLGKSGLCWLKIHLANLFANGVDKLSHEARLAFTENHLDDIF 544
NHLGSD+CRGILEFAEGRPLGKSGL WLKIHLANLFA GVDKLSHE R+AFTENHLDDIF
Sbjct: 139 NHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANLFACGVDKLSHEGRIAFTENHLDDIF 198
Query: 545 DSADRPLEG 571
DSAD+PLEG
Sbjct: 199 DSADKPLEG 207