BLASTX nr result

ID: Catharanthus23_contig00030175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030175
         (322 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004251087.1| PREDICTED: transcription factor E2FB-like [S...    67   3e-09
ref|XP_006362858.1| PREDICTED: transcription factor E2FB-like [S...    66   6e-09
emb|CBI28269.3| unnamed protein product [Vitis vinifera]               65   1e-08
ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [V...    65   1e-08
emb|CCF72392.1| transcription factor E2FB [Nicotiana tabacum]          64   2e-08
emb|CAC17702.1| transcription factor (E2F) [Oxybasis rubra]            60   2e-07
ref|XP_002312830.1| E2F transcription factor-1 family protein [P...    56   6e-06
dbj|BAA86386.1| transcription factor [Nicotiana tabacum]               55   8e-06

>ref|XP_004251087.1| PREDICTED: transcription factor E2FB-like [Solanum lycopersicum]
          Length = 449

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHS-PPQPEEMPSTSNHPG 176
           TDMWRTES +DWNELD I E Y++ANVSTP A + PP   E+PS +N  G
Sbjct: 399 TDMWRTESAIDWNELDVIQEDYSIANVSTPRAQTPPPATTEVPSAANTSG 448


>ref|XP_006362858.1| PREDICTED: transcription factor E2FB-like [Solanum tuberosum]
          Length = 448

 Score = 65.9 bits (159), Expect = 6e-09
 Identities = 31/50 (62%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHS-PPQPEEMPSTSNHPG 176
           TDMWRTES +DWNELD I E Y++ANVSTP A + PP   E+PS +N  G
Sbjct: 398 TDMWRTESAIDWNELDVIQEDYSIANVSTPRAQTPPPATTEVPSAANTYG 447


>emb|CBI28269.3| unnamed protein product [Vitis vinifera]
          Length = 446

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHSPP-QPEEMPSTSNHPG 176
           TDMWRTE GV+WNELD + + Y MANVSTP   +PP    E+P  +N PG
Sbjct: 396 TDMWRTEPGVEWNELDALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPG 445


>ref|XP_002272473.1| PREDICTED: transcription factor E2FB-like [Vitis vinifera]
          Length = 457

 Score = 64.7 bits (156), Expect = 1e-08
 Identities = 29/50 (58%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHSPP-QPEEMPSTSNHPG 176
           TDMWRTE GV+WNELD + + Y MANVSTP   +PP    E+P  +N PG
Sbjct: 407 TDMWRTEPGVEWNELDALNDDYAMANVSTPQPQTPPSSAAEVPPAANTPG 456


>emb|CCF72392.1| transcription factor E2FB [Nicotiana tabacum]
          Length = 449

 Score = 64.3 bits (155), Expect = 2e-08
 Identities = 29/50 (58%), Positives = 37/50 (74%), Gaps = 1/50 (2%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHSPP-QPEEMPSTSNHPG 176
           TDMWRTES +DWNELD I E +++ANVSTP + +PP    E+PS +N  G
Sbjct: 399 TDMWRTESAIDWNELDVIQEDFSIANVSTPRSETPPTNTTEVPSAANTTG 448


>emb|CAC17702.1| transcription factor (E2F) [Oxybasis rubra]
          Length = 454

 Score = 60.5 bits (145), Expect = 2e-07
 Identities = 26/36 (72%), Positives = 29/36 (80%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHSPP 215
           TDMWRT+SGV+WNEL TI E YT+ANV TP   SPP
Sbjct: 405 TDMWRTDSGVEWNELGTIHEDYTVANVGTPQPQSPP 440


>ref|XP_002312830.1| E2F transcription factor-1 family protein [Populus trichocarpa]
           gi|222849238|gb|EEE86785.1| E2F transcription factor-1
           family protein [Populus trichocarpa]
          Length = 473

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 23/46 (50%), Positives = 29/46 (63%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHSPPQPEEMPSTSN 185
           TDMWR E  V+WN+LDT+   Y M N STP   +P  P E+P  +N
Sbjct: 424 TDMWRNEPVVEWNDLDTLHNDYVMPNFSTPQPQTPSNPTEVPPAAN 469


>dbj|BAA86386.1| transcription factor [Nicotiana tabacum]
          Length = 439

 Score = 55.5 bits (132), Expect = 8e-06
 Identities = 25/50 (50%), Positives = 34/50 (68%)
 Frame = -1

Query: 322 TDMWRTESGVDWNELDTIPETYTMANVSTPVAHSPPQPEEMPSTSNHPGS 173
           TD+WR +S +DWNEL+ I E Y++ANVSTP A +PP       ++N  GS
Sbjct: 390 TDIWRADSVLDWNELNVIHEDYSIANVSTPRAQTPPSSTTELPSANTTGS 439


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