BLASTX nr result
ID: Catharanthus23_contig00030106
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030106
(223 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002521772.1| conserved hypothetical protein [Ricinus comm... 77 3e-12
ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vit... 71 1e-10
ref|XP_006376129.1| hypothetical protein POPTR_0013s10060g [Popu... 64 2e-08
ref|XP_006376127.1| hypothetical protein POPTR_0013s10060g [Popu... 64 2e-08
ref|XP_002327285.1| predicted protein [Populus trichocarpa] gi|5... 64 2e-08
gb|EXB62508.1| Putative F-box protein [Morus notabilis] 61 1e-07
ref|XP_006478180.1| PREDICTED: putative F-box protein At1g33530-... 59 7e-07
ref|XP_006441528.1| hypothetical protein CICLE_v10020371mg [Citr... 59 7e-07
ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23... 57 3e-06
ref|XP_004309907.1| PREDICTED: putative F-box protein At1g12855-... 56 4e-06
ref|XP_004309906.1| PREDICTED: putative F-box protein At1g12855-... 56 4e-06
ref|XP_006478178.1| PREDICTED: putative F-box protein At3g52320-... 55 1e-05
ref|XP_006441526.1| hypothetical protein CICLE_v10020327mg [Citr... 55 1e-05
>ref|XP_002521772.1| conserved hypothetical protein [Ricinus communis]
gi|223538985|gb|EEF40582.1| conserved hypothetical
protein [Ricinus communis]
Length = 413
Score = 76.6 bits (187), Expect = 3e-12
Identities = 39/73 (53%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 GEGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGF 182
G+ WTK++SI G + DM P+ RI E+IFK D+DG Y+YDC L MRKVEM +
Sbjct: 330 GDVWTKQYSITRGSIIDMVPICSLRIGGELIFKRDEDGSFYSYDCRLKEMRKVEMDKKCL 389
Query: 183 PADGWFLPHVNSL 221
P G +LPHVNSL
Sbjct: 390 PFHGTYLPHVNSL 402
>ref|XP_002282067.1| PREDICTED: F-box protein At3g07870-like [Vitis vinifera]
Length = 417
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/73 (50%), Positives = 49/73 (67%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 GEGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGF 182
GEGWTK+ I G + DM PL+ R + E++FK D+DG LYAYD L +MRK++M+
Sbjct: 334 GEGWTKQHCITTGCILDMVPLFSMRTTEEMVFKRDEDGSLYAYDFQLQVMRKIDMET--- 390
Query: 183 PADGWFLPHVNSL 221
P +LPHVNSL
Sbjct: 391 PLSDCYLPHVNSL 403
>ref|XP_006376129.1| hypothetical protein POPTR_0013s10060g [Populus trichocarpa]
gi|550325399|gb|ERP53926.1| hypothetical protein
POPTR_0013s10060g [Populus trichocarpa]
Length = 436
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 WTKKFSIGEGYLGDMTPLYFSRISCEIIFKDK-DGQLYAYDCGLHLMRKVEMKQVGFPAD 191
WTK++SI +G L DM PL+ RIS ++IF+ K DG +AYD +MR+ EM + +
Sbjct: 356 WTKQYSITKGSLIDMVPLFSLRISGDVIFRRKEDGSFHAYDFKSEVMREFEMDKERNLSS 415
Query: 192 GWFLPHVNSL 221
G +LPHVNSL
Sbjct: 416 GAYLPHVNSL 425
>ref|XP_006376127.1| hypothetical protein POPTR_0013s10060g [Populus trichocarpa]
gi|550325397|gb|ERP53924.1| hypothetical protein
POPTR_0013s10060g [Populus trichocarpa]
Length = 396
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 WTKKFSIGEGYLGDMTPLYFSRISCEIIFKDK-DGQLYAYDCGLHLMRKVEMKQVGFPAD 191
WTK++SI +G L DM PL+ RIS ++IF+ K DG +AYD +MR+ EM + +
Sbjct: 316 WTKQYSITKGSLIDMVPLFSLRISGDVIFRRKEDGSFHAYDFKSEVMREFEMDKERNLSS 375
Query: 192 GWFLPHVNSL 221
G +LPHVNSL
Sbjct: 376 GAYLPHVNSL 385
>ref|XP_002327285.1| predicted protein [Populus trichocarpa]
gi|566200413|ref|XP_006376128.1| hypothetical protein
POPTR_0013s10060g [Populus trichocarpa]
gi|550325398|gb|ERP53925.1| hypothetical protein
POPTR_0013s10060g [Populus trichocarpa]
Length = 426
Score = 64.3 bits (155), Expect = 2e-08
Identities = 34/70 (48%), Positives = 47/70 (67%), Gaps = 1/70 (1%)
Frame = +3
Query: 15 WTKKFSIGEGYLGDMTPLYFSRISCEIIFKDK-DGQLYAYDCGLHLMRKVEMKQVGFPAD 191
WTK++SI +G L DM PL+ RIS ++IF+ K DG +AYD +MR+ EM + +
Sbjct: 346 WTKQYSITKGSLIDMVPLFSLRISGDVIFRRKEDGSFHAYDFKSEVMREFEMDKERNLSS 405
Query: 192 GWFLPHVNSL 221
G +LPHVNSL
Sbjct: 406 GAYLPHVNSL 415
>gb|EXB62508.1| Putative F-box protein [Morus notabilis]
Length = 389
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 GEGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGF 182
G+ W+K I G + DM PL+ RI+ E++FK D+DG +Y YD H M KVEM +
Sbjct: 314 GDVWSKHRRIITGCILDMIPLFSLRITGELVFKRDEDGSIYVYDFQFHRMTKVEMMKKCV 373
Query: 183 PADGWFLPHVNSL 221
P + PHVNSL
Sbjct: 374 PFAVSYFPHVNSL 386
>ref|XP_006478180.1| PREDICTED: putative F-box protein At1g33530-like [Citrus sinensis]
Length = 413
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 EGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGFP 185
E W+ I G + D+ P + RIS ++IF+ D+DG YAYD LM K+E +Q FP
Sbjct: 331 EAWSMHHRITRGCIIDLVPHFCLRISGDMIFRRDEDGSFYAYDFIRELMTKIEREQGWFP 390
Query: 186 ADGWFLPHVNSL 221
LPHVNSL
Sbjct: 391 PSSACLPHVNSL 402
>ref|XP_006441528.1| hypothetical protein CICLE_v10020371mg [Citrus clementina]
gi|567898082|ref|XP_006441529.1| hypothetical protein
CICLE_v10020371mg [Citrus clementina]
gi|557543790|gb|ESR54768.1| hypothetical protein
CICLE_v10020371mg [Citrus clementina]
gi|557543791|gb|ESR54769.1| hypothetical protein
CICLE_v10020371mg [Citrus clementina]
Length = 413
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/72 (44%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 EGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGFP 185
E W+ I G + D+ P + RIS ++IF+ D+DG YAYD LM K+E +Q FP
Sbjct: 331 EAWSMHHRITRGCIIDLVPHFCLRISGDMIFRRDEDGSFYAYDFIRELMTKIEREQGWFP 390
Query: 186 ADGWFLPHVNSL 221
LPHVNSL
Sbjct: 391 PSSACLPHVNSL 402
>ref|XP_004139751.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Cucumis
sativus]
Length = 401
Score = 56.6 bits (135), Expect = 3e-06
Identities = 32/72 (44%), Positives = 40/72 (55%)
Frame = +3
Query: 6 GEGWTKKFSIGEGYLGDMTPLYFSRISCEIIFKDKDGQLYAYDCGLHLMRKVEMKQVGFP 185
GE W K+ SI G DM PL RI ++IFK KDG Y YD L + KVE K+
Sbjct: 324 GEIWIKQHSINIGCRMDMVPLLSFRIRGDLIFKSKDGFFYIYDFELRSITKVEDKKRLRV 383
Query: 186 ADGWFLPHVNSL 221
+ + PHVNS+
Sbjct: 384 SSDFLFPHVNSM 395
>ref|XP_004309907.1| PREDICTED: putative F-box protein At1g12855-like isoform 2
[Fragaria vesca subsp. vesca]
Length = 349
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 GEGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGF 182
GE WTK SI G + DM P + RI +IIFK D++G LY+YD + KVEM +
Sbjct: 267 GEIWTKNHSITVGSIIDMIPYFSLRIKGDIIFKRDEEGTLYSYDFQQQDLSKVEMVKGCM 326
Query: 183 PADGWFLPHVNSL 221
P LPHVNSL
Sbjct: 327 PTS--CLPHVNSL 337
>ref|XP_004309906.1| PREDICTED: putative F-box protein At1g12855-like isoform 1
[Fragaria vesca subsp. vesca]
Length = 419
Score = 56.2 bits (134), Expect = 4e-06
Identities = 35/73 (47%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Frame = +3
Query: 6 GEGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGF 182
GE WTK SI G + DM P + RI +IIFK D++G LY+YD + KVEM +
Sbjct: 337 GEIWTKNHSITVGSIIDMIPYFSLRIKGDIIFKRDEEGTLYSYDFQQQDLSKVEMVKGCM 396
Query: 183 PADGWFLPHVNSL 221
P LPHVNSL
Sbjct: 397 PTS--CLPHVNSL 407
>ref|XP_006478178.1| PREDICTED: putative F-box protein At3g52320-like isoform X1 [Citrus
sinensis]
Length = 417
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 EGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGFP 185
E WTK I + DM P + RIS +++F+ D+DG YAYD +M K+E ++ FP
Sbjct: 337 EAWTKYHRIMRSVI-DMVPHFCLRISGDMVFRRDEDGSFYAYDFTHKVMTKIEREKGWFP 395
Query: 186 ADGWFLPHVNSL 221
LPHVNSL
Sbjct: 396 PSSSCLPHVNSL 407
>ref|XP_006441526.1| hypothetical protein CICLE_v10020327mg [Citrus clementina]
gi|557543788|gb|ESR54766.1| hypothetical protein
CICLE_v10020327mg [Citrus clementina]
Length = 418
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/72 (43%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Frame = +3
Query: 9 EGWTKKFSIGEGYLGDMTPLYFSRISCEIIFK-DKDGQLYAYDCGLHLMRKVEMKQVGFP 185
E WTK I + DM P + RIS +++F+ D+DG YAYD +M K+E ++ FP
Sbjct: 337 EAWTKYHRIMRSVI-DMVPHFCLRISGDMVFRRDEDGSFYAYDFTHKVMTKIEREKGWFP 395
Query: 186 ADGWFLPHVNSL 221
LPHVNSL
Sbjct: 396 PSSSCLPHVNSL 407