BLASTX nr result

ID: Catharanthus23_contig00030054 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00030054
         (257 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632272.1| PREDICTED: shugoshin-1-like [Vitis vinifera]       58   1e-06
emb|CBI17144.3| unnamed protein product [Vitis vinifera]               58   1e-06
gb|EOY18839.1| Shugoshin C terminus, putative isoform 2 [Theobro...    57   2e-06
gb|EOY18838.1| Shugoshin C terminus, putative isoform 1 [Theobro...    57   2e-06
gb|EOY34492.1| Shugoshin C terminus, putative [Theobroma cacao]        57   3e-06
ref|XP_006384956.1| hypothetical protein POPTR_0004s22560g [Popu...    56   4e-06
ref|XP_002331453.1| predicted protein [Populus trichocarpa]            56   4e-06
ref|XP_002272822.2| PREDICTED: shugoshin-1-like [Vitis vinifera]...    56   6e-06

>ref|XP_003632272.1| PREDICTED: shugoshin-1-like [Vitis vinifera]
          Length = 297

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +1

Query: 31  EKHGGSISKRAERTSIGRPLRKAAEKVQSYKEIPLNTKMRR 153
           EKH    ++ ++R+SIGRPLR+AAEKVQSYKE PLNTKMRR
Sbjct: 258 EKHE---ARGSQRSSIGRPLRRAAEKVQSYKEAPLNTKMRR 295


>emb|CBI17144.3| unnamed protein product [Vitis vinifera]
          Length = 292

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 29/41 (70%), Positives = 35/41 (85%)
 Frame = +1

Query: 31  EKHGGSISKRAERTSIGRPLRKAAEKVQSYKEIPLNTKMRR 153
           EKH    ++ ++R+SIGRPLR+AAEKVQSYKE PLNTKMRR
Sbjct: 253 EKHE---ARGSQRSSIGRPLRRAAEKVQSYKEAPLNTKMRR 290


>gb|EOY18839.1| Shugoshin C terminus, putative isoform 2 [Theobroma cacao]
          Length = 381

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
 Frame = +1

Query: 25  KDEKHGGSISKRAE-----RTSIGRPLRKAAEKVQSYKEIPLNTKMRRND 159
           K E   GSI+ R E     R S+GRPLR+A EKVQSYKEIP+N KMRR +
Sbjct: 332 KKEHEEGSITPRNEAQELRRISVGRPLRRAVEKVQSYKEIPVNVKMRREE 381


>gb|EOY18838.1| Shugoshin C terminus, putative isoform 1 [Theobroma cacao]
          Length = 382

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 30/50 (60%), Positives = 35/50 (70%), Gaps = 5/50 (10%)
 Frame = +1

Query: 25  KDEKHGGSISKRAE-----RTSIGRPLRKAAEKVQSYKEIPLNTKMRRND 159
           K E   GSI+ R E     R S+GRPLR+A EKVQSYKEIP+N KMRR +
Sbjct: 333 KKEHEEGSITPRNEAQELRRISVGRPLRRAVEKVQSYKEIPVNVKMRREE 382


>gb|EOY34492.1| Shugoshin C terminus, putative [Theobroma cacao]
          Length = 302

 Score = 56.6 bits (135), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 28/32 (87%)
 Frame = +1

Query: 64  ERTSIGRPLRKAAEKVQSYKEIPLNTKMRRND 159
           +R S GRPLRKAAEKVQSYKE+PLN KMRR D
Sbjct: 271 KRPSFGRPLRKAAEKVQSYKEVPLNVKMRRED 302


>ref|XP_006384956.1| hypothetical protein POPTR_0004s22560g [Populus trichocarpa]
           gi|550341724|gb|ERP62753.1| hypothetical protein
           POPTR_0004s22560g [Populus trichocarpa]
          Length = 303

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +1

Query: 19  VAKDEKHG-GSISKRAERTSIGRPLRKAAEKVQSYKEIPLNTKMRR 153
           + K+E  G G+ ++ + R+SIGRPLR+AAEKVQSYKE+P+N KMRR
Sbjct: 250 ITKEETCGAGNEAQVSLRSSIGRPLRRAAEKVQSYKEVPVNVKMRR 295


>ref|XP_002331453.1| predicted protein [Populus trichocarpa]
          Length = 119

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/46 (60%), Positives = 38/46 (82%), Gaps = 1/46 (2%)
 Frame = +1

Query: 19  VAKDEKHG-GSISKRAERTSIGRPLRKAAEKVQSYKEIPLNTKMRR 153
           + K+E  G G+ ++ + R+SIGRPLR+AAEKVQSYKE+P+N KMRR
Sbjct: 66  ITKEETCGAGNEAQVSLRSSIGRPLRRAAEKVQSYKEVPVNVKMRR 111


>ref|XP_002272822.2| PREDICTED: shugoshin-1-like [Vitis vinifera]
           gi|296085974|emb|CBI31415.3| unnamed protein product
           [Vitis vinifera]
          Length = 317

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 25/31 (80%), Positives = 30/31 (96%)
 Frame = +1

Query: 67  RTSIGRPLRKAAEKVQSYKEIPLNTKMRRND 159
           R+SIGRPLR+AAEKVQSYKEIP+N KMRR++
Sbjct: 287 RSSIGRPLRRAAEKVQSYKEIPINVKMRRSE 317


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