BLASTX nr result
ID: Catharanthus23_contig00030047
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00030047
(684 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ06411.1| hypothetical protein PRUPE_ppa005891mg [Prunus pe... 79 1e-12
ref|XP_002534099.1| ring finger protein, putative [Ricinus commu... 67 5e-09
ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like... 67 7e-09
ref|XP_004289297.1| PREDICTED: RING-H2 finger protein ATL52-like... 66 9e-09
ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854... 66 9e-09
ref|XP_006426316.1| hypothetical protein CICLE_v10025698mg [Citr... 64 3e-08
ref|XP_006466274.1| PREDICTED: RING-H2 finger protein ATL52-like... 64 4e-08
gb|EXC09714.1| RING-H2 finger protein ATL54 [Morus notabilis] 64 6e-08
ref|XP_002310548.1| hypothetical protein POPTR_0007s04960g [Popu... 62 2e-07
ref|XP_004250123.1| PREDICTED: RING-H2 finger protein ATL54-like... 62 2e-07
ref|XP_004250122.1| PREDICTED: RING-H2 finger protein ATL54-like... 62 2e-07
emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera] 62 2e-07
ref|XP_002307066.2| hypothetical protein POPTR_0005s07220g [Popu... 60 6e-07
ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like... 57 5e-06
emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera] 57 5e-06
>gb|EMJ06411.1| hypothetical protein PRUPE_ppa005891mg [Prunus persica]
Length = 438
Score = 79.0 bits (193), Expect = 1e-12
Identities = 61/168 (36%), Positives = 84/168 (50%), Gaps = 9/168 (5%)
Frame = -3
Query: 673 GQPENDQSIDDDEN-------GGQSENEEIKNPHSIVR--DNGVRVLSDLADKRLRAVKE 521
G ++ I DDEN G +EN P S V R LSDL D R V E
Sbjct: 277 GSGTSEVGITDDENVFAIPTEGRTAENSGKVLPSSTVAAGSRDPRALSDLTDNR--RVTE 334
Query: 520 QEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSGKEFKPRDAKLI 341
+++QP+RRS+SMD+ SAS IY +A + P EEG S S+ + K +SG K +
Sbjct: 335 EDIQPIRRSVSMDSSSASRIYRDVANVIP--EEGSSNSQLVHVKNPNSGIVSKYGSSSSS 392
Query: 340 IDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRHSRNQQELVPT 197
+ K +S S G SLQ PI MKR ++H R+Q ++P+
Sbjct: 393 LAKLMRSSSIGFSLQMGPISMKR--PFSSGRKFFSSKHGRSQSSILPS 438
>ref|XP_002534099.1| ring finger protein, putative [Ricinus communis]
gi|223525847|gb|EEF28281.1| ring finger protein,
putative [Ricinus communis]
Length = 344
Score = 67.0 bits (162), Expect = 5e-09
Identities = 52/152 (34%), Positives = 75/152 (49%), Gaps = 2/152 (1%)
Frame = -3
Query: 649 IDDDENGGQSENEEIKNPHSIVRDNGVRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSA 470
I+D+ GG S+ + V N RV SDL D RL + E+QPVRRS S+D+ SA
Sbjct: 199 IEDETIGGNSKT----GLNFAVLGNHSRVQSDLVDTRLTI--KAEMQPVRRSASLDSSSA 252
Query: 469 SVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSGKEFKPR--DAKLIIDKPRKSFSFGRSLQ 296
IY+++ K+ P + G + ++ R K K R + + K KS S +LQ
Sbjct: 253 MAIYSSVGKVIP-GKHGENLDIQMVRLKHSKSKNVLKRGSNGNISFRKLMKSSSISHALQ 311
Query: 295 KMPIRMKRXXXXXXXXXXXFTRHSRNQQELVP 200
K PI MKR +R SR+Q ++P
Sbjct: 312 KAPIAMKRSFSSSGKSSSSSSRLSRSQDSILP 343
>ref|XP_004143556.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449496527|ref|XP_004160157.1| PREDICTED: RING-H2
finger protein ATL54-like [Cucumis sativus]
Length = 397
Score = 66.6 bits (161), Expect = 7e-09
Identities = 56/171 (32%), Positives = 79/171 (46%), Gaps = 14/171 (8%)
Frame = -3
Query: 670 QPENDQSIDDDENGGQSENEEIKNPHSIVRDNGV----------RVLSDLADKRLRAVKE 521
QP ++I + + EN E +N + ++G R LS+L + + R E
Sbjct: 229 QPAPIENIQRETEAIEEENREDENSGEVGSNSGENSVIPIKRLSRTLSNLTENQNREAVE 288
Query: 520 QEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSGKEFKPRDAKLI 341
E Q +RRS+SMD+ SA IY A AKIQ + EEGCS S + K P I
Sbjct: 289 DEGQGIRRSVSMDSVSAMAIYQATAKIQ-IPEEGCSSSGTLMEVKNSVSSRNLPFPKGGI 347
Query: 340 IDKPR----KSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRHSRNQQELVP 200
++ K SFG S+QK I MKR + RH R+Q ++P
Sbjct: 348 GNQSLYNLVKGISFGCSMQKGGISMKR--FSSGRRKLQWARHYRSQSSVLP 396
>ref|XP_004289297.1| PREDICTED: RING-H2 finger protein ATL52-like [Fragaria vesca subsp.
vesca]
Length = 409
Score = 66.2 bits (160), Expect = 9e-09
Identities = 51/131 (38%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Frame = -3
Query: 643 DDEN------GGQSENEEIKNPHSIVRDNGV--RVLSDLADKRLRAVKEQEVQPVRRSIS 488
DDEN G+S P+S + + R SDLAD R V E +VQP+RRS+S
Sbjct: 259 DDENVSTVSIDGRSVESSKVLPNSNLAEGSCDPRAWSDLADNR--RVTEDDVQPIRRSVS 316
Query: 487 MDAPSASVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSGKEFKPRDAKLIIDKPRKSFSFG 308
+D+ SAS IY A+A + P E+G S S+ + K SG K +A + K ++S S
Sbjct: 317 VDSMSASRIYRAVANVIP--EQGSSNSQLVLVKNPKSGIVPKQDNASSSVSKHKRSSSNV 374
Query: 307 RSLQKMPIRMK 275
SLQ +P+ MK
Sbjct: 375 ISLQMVPMAMK 385
>ref|XP_003632477.1| PREDICTED: uncharacterized protein LOC100854068 [Vitis vinifera]
Length = 372
Score = 66.2 bits (160), Expect = 9e-09
Identities = 43/124 (34%), Positives = 64/124 (51%)
Frame = -3
Query: 571 VRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKR 392
+RVLSDL D E++++PVRRS+SMD +AS IY A+A PV EG S +
Sbjct: 253 LRVLSDLVDNH--RASEEQIEPVRRSVSMDLSAASEIYLAMANAVPVEHEGTSDMRSVPG 310
Query: 391 KKIDSGKEFKPRDAKLIIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRHSRNQQ 212
KK++ + + K KS S G SL + P+ MK+ +R SR++
Sbjct: 311 KKLNLEIVARQSCRNSSLYKLMKSSSIGCSLHRGPLSMKK---SLSSFPMFSSRRSRSRD 367
Query: 211 ELVP 200
++P
Sbjct: 368 SILP 371
>ref|XP_006426316.1| hypothetical protein CICLE_v10025698mg [Citrus clementina]
gi|557528306|gb|ESR39556.1| hypothetical protein
CICLE_v10025698mg [Citrus clementina]
Length = 420
Score = 64.3 bits (155), Expect = 3e-08
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Frame = -3
Query: 673 GQPENDQSIDDDENGGQSENEEIKNPHSIVR--DNGVRVLSDLADKRLRAVKEQEVQPVR 500
G N+ S+ ++ ++ +I PH R D+G RVLSDLA+ R + E++ QP+R
Sbjct: 263 GNDNNNGSLPVEDERTVDDSMKIL-PHLKTRNCDSGCRVLSDLAESR--RMVEEDTQPMR 319
Query: 499 RSISMDAPSASVIYAAIAK-IQPVHEEGCSKSEEIKRKKIDSGKEFK-------PRDAKL 344
RS+S+DA +AS+IY A+ + + V +G ++ K K S FK P +L
Sbjct: 320 RSVSLDASAASMIYNAVTEGVVHVKHQGNMDAQLGKSKSSKSKIVFKRGSGSSSPSICRL 379
Query: 343 IIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRHSRNQQEL 206
+ KS S G SLQK P+ MKR +RHSR L
Sbjct: 380 V-----KSSSIGSSLQKGPMLMKR--SHSSIGKLPSSRHSRRYSAL 418
>ref|XP_006466274.1| PREDICTED: RING-H2 finger protein ATL52-like [Citrus sinensis]
Length = 422
Score = 63.9 bits (154), Expect = 4e-08
Identities = 57/166 (34%), Positives = 84/166 (50%), Gaps = 10/166 (6%)
Frame = -3
Query: 673 GQPENDQSIDDDENGGQSENEEIKNPHSIVR--DNGVRVLSDLADKRLRAVKEQEVQPVR 500
G N+ S+ ++ ++ +I PH R D+G RVLSDLA+ R V E++ QP+R
Sbjct: 265 GNDNNNGSLPVEDERTVDDSMKIL-PHLKTRNCDSGCRVLSDLAENR--RVVEEDTQPMR 321
Query: 499 RSISMDAPSASVIYAAIAK-IQPVHEEGCSKSEEIKRKKIDSGKEFK-------PRDAKL 344
RS+S+D+ +AS+IY A+ + + V +G ++ K K S FK P +L
Sbjct: 322 RSVSLDSSAASMIYNAVTEGVVHVKHQGNMDAQLGKSKSSKSKIVFKRGSGSSSPSICRL 381
Query: 343 IIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRHSRNQQEL 206
+ KS S G SLQK P+ MKR +RHSR L
Sbjct: 382 V-----KSSSIGSSLQKGPMLMKR--SLSSIGKLPSSRHSRRYSVL 420
>gb|EXC09714.1| RING-H2 finger protein ATL54 [Morus notabilis]
Length = 375
Score = 63.5 bits (153), Expect = 6e-08
Identities = 48/133 (36%), Positives = 69/133 (51%), Gaps = 1/133 (0%)
Frame = -3
Query: 595 HSIVRDNGVRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGC 416
+S+VR R LSDL D+R V ++ QP+RRS+SMDA SA+ +Y A+ V ++G
Sbjct: 250 NSVVRSCDSRALSDLGDQR--EVVGEDFQPMRRSVSMDASSATAVYRAVT---IVSDQGS 304
Query: 415 SKSE-EIKRKKIDSGKEFKPRDAKLIIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXX 239
S S+ + K + K L + K +S S GRSLQK P MKR
Sbjct: 305 SNSQLAVPVKSSNLAIVSKRVTRNLSLYKLMRSSSSGRSLQKGPTSMKR---SSSSRKSF 361
Query: 238 FTRHSRNQQELVP 200
++H R+Q + P
Sbjct: 362 ASKHGRSQSSIFP 374
>ref|XP_002310548.1| hypothetical protein POPTR_0007s04960g [Populus trichocarpa]
gi|222853451|gb|EEE90998.1| hypothetical protein
POPTR_0007s04960g [Populus trichocarpa]
Length = 395
Score = 62.0 bits (149), Expect = 2e-07
Identities = 49/135 (36%), Positives = 71/135 (52%)
Frame = -3
Query: 676 GGQPENDQSIDDDENGGQSENEEIKNPHSIVRDNGVRVLSDLADKRLRAVKEQEVQPVRR 497
G +P + D+ N G N + + H I R+ +R SDL DK + V E+E+QPVRR
Sbjct: 247 GEEPICGLPVVDESNAG---NSSLNSNHFISRNPRIR--SDLVDKLV--VVEEEMQPVRR 299
Query: 496 SISMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSGKEFKPRDAKLIIDKPRKSF 317
S+S+D +AS IY+ +A + P + S S ++ K+ S K + K K+
Sbjct: 300 SVSLDFSTASAIYSVLANVAPGKCQANSDSLLVQPKQPKSKNAAKRGSSG--FHKLLKNS 357
Query: 316 SFGRSLQKMPIRMKR 272
S SLQK PI MKR
Sbjct: 358 SIRCSLQKGPISMKR 372
>ref|XP_004250123.1| PREDICTED: RING-H2 finger protein ATL54-like isoform 2 [Solanum
lycopersicum]
Length = 400
Score = 61.6 bits (148), Expect = 2e-07
Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Frame = -3
Query: 655 QSIDDDENGGQSENE-EIKNPHSIV--RDNGVRVLSDLADKRLRAVKE--QEVQPVRRSI 491
+++D++E G+S + +K P V R G R SDL D+ R VKE E+QP RRS+
Sbjct: 256 ENVDEEEEEGRSTLDLSMKIPRVNVDGRRKGGRAFSDLVDQH-RVVKEINDELQPARRSV 314
Query: 490 SMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSG-KEFKPRDAKLIIDKPRKSFS 314
SMD+ A VI+ A+ E+ KK D G K D + K KS S
Sbjct: 315 SMDSSVARVIHLAM--------------NEMNSKKFDQGCSSSKRGDRNSSLYKAMKSSS 360
Query: 313 FGRSLQKMP-IRMKR 272
FG SLQK+P I MKR
Sbjct: 361 FGLSLQKVPIISMKR 375
>ref|XP_004250122.1| PREDICTED: RING-H2 finger protein ATL54-like isoform 1 [Solanum
lycopersicum]
Length = 418
Score = 61.6 bits (148), Expect = 2e-07
Identities = 53/135 (39%), Positives = 70/135 (51%), Gaps = 7/135 (5%)
Frame = -3
Query: 655 QSIDDDENGGQSENE-EIKNPHSIV--RDNGVRVLSDLADKRLRAVKE--QEVQPVRRSI 491
+++D++E G+S + +K P V R G R SDL D+ R VKE E+QP RRS+
Sbjct: 256 ENVDEEEEEGRSTLDLSMKIPRVNVDGRRKGGRAFSDLVDQH-RVVKEINDELQPARRSV 314
Query: 490 SMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKRKKIDSG-KEFKPRDAKLIIDKPRKSFS 314
SMD+ A VI+ A+ E+ KK D G K D + K KS S
Sbjct: 315 SMDSSVARVIHLAM--------------NEMNSKKFDQGCSSSKRGDRNSSLYKAMKSSS 360
Query: 313 FGRSLQKMP-IRMKR 272
FG SLQK+P I MKR
Sbjct: 361 FGLSLQKVPIISMKR 375
>emb|CAN61677.1| hypothetical protein VITISV_018326 [Vitis vinifera]
Length = 371
Score = 61.6 bits (148), Expect = 2e-07
Identities = 43/124 (34%), Positives = 64/124 (51%)
Frame = -3
Query: 571 VRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGCSKSEEIKR 392
+RVLSDL D E++++PVRRS+SMD +AS I A+A PV EG S +
Sbjct: 252 LRVLSDLVDNH--RASEEQIEPVRRSVSMDLSAASEICLAMANAVPVEHEGTSDMRSVPG 309
Query: 391 KKIDSGKEFKPRDAKLIIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRHSRNQQ 212
KK++ + + K KS S G S + P+ MK+ +R SR++
Sbjct: 310 KKLNLEIVARQSXXNSSLYKLMKSSSIGCSXHRGPLSMKK---SLSSFXXFSSRRSRSRD 366
Query: 211 ELVP 200
++P
Sbjct: 367 SILP 370
>ref|XP_002307066.2| hypothetical protein POPTR_0005s07220g [Populus trichocarpa]
gi|550338311|gb|EEE94062.2| hypothetical protein
POPTR_0005s07220g [Populus trichocarpa]
Length = 421
Score = 60.1 bits (144), Expect = 6e-07
Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Frame = -3
Query: 649 IDDDENGGQSENEEIKNPHSIVRDNGVRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSA 470
I+D+ + G N + HSI R+ +R SDL D +L V E E+Q +RRS+S+D +A
Sbjct: 278 IEDNTSAG---NSSFCSNHSISRNPRIR--SDLVDNKL-VVVESEMQTLRRSVSLDFSAA 331
Query: 469 SVIYAAIAKIQP--VHEEGCSKSEEIKRKKIDSGKEFKPRDAKLIIDKPRKSFSFGRSLQ 296
S +Y +A + P H S + K+ K + + + L K K+ S GRSLQ
Sbjct: 332 SAVYNVVANVVPGKCHANSDSLLVQPKQPKTKNVAK-RGSSGNLGFHKLMKNSSKGRSLQ 390
Query: 295 KMPIRMKR 272
K PI MKR
Sbjct: 391 KGPISMKR 398
>ref|XP_003634417.1| PREDICTED: RING-H2 finger protein ATL54-like [Vitis vinifera]
Length = 404
Score = 57.0 bits (136), Expect = 5e-06
Identities = 42/129 (32%), Positives = 59/129 (45%)
Frame = -3
Query: 586 VRDNGVRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGCSKS 407
V NG VL + V + E+QPVRRS+SMD+ SA+ I+ +AK +G
Sbjct: 277 VNSNGDVVLEVNGNSANNHVVDSEIQPVRRSVSMDSSSAATIFFGLAKFHADESKGNWVD 336
Query: 406 EEIKRKKIDSGKEFKPRDAKLIIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRH 227
E + +K DSG K A + S S + L K PI MKR RH
Sbjct: 337 ETMDGRKFDSGSVPKRDVAYTSTFRQMGSPSIAQCLHKGPISMKR--SNSCGGRFFLPRH 394
Query: 226 SRNQQELVP 200
+R+ ++P
Sbjct: 395 NRSTNAILP 403
>emb|CAN61577.1| hypothetical protein VITISV_008030 [Vitis vinifera]
Length = 404
Score = 57.0 bits (136), Expect = 5e-06
Identities = 42/129 (32%), Positives = 59/129 (45%)
Frame = -3
Query: 586 VRDNGVRVLSDLADKRLRAVKEQEVQPVRRSISMDAPSASVIYAAIAKIQPVHEEGCSKS 407
V NG VL + V + E+QPVRRS+SMD+ SA+ I+ +AK +G
Sbjct: 277 VNSNGDVVLEVNGNSANNHVVDSEIQPVRRSVSMDSSSAATIFFGLAKFHADESKGNWVD 336
Query: 406 EEIKRKKIDSGKEFKPRDAKLIIDKPRKSFSFGRSLQKMPIRMKRXXXXXXXXXXXFTRH 227
E + +K DSG K A + S S + L K PI MKR RH
Sbjct: 337 ETMDGRKFDSGSVPKRDVAYTSTFRQMGSPSIAQCLHKGPISMKR--SNSCGGRFFLPRH 394
Query: 226 SRNQQELVP 200
+R+ ++P
Sbjct: 395 NRSTNAILP 403