BLASTX nr result

ID: Catharanthus23_contig00029918 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029918
         (480 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004240304.1| PREDICTED: putative late blight resistance p...    60   4e-07
ref|XP_006357610.1| PREDICTED: putative late blight resistance p...    57   3e-06
ref|XP_006367893.1| PREDICTED: putative late blight resistance p...    56   4e-06
ref|XP_004240205.1| PREDICTED: putative late blight resistance p...    56   4e-06
ref|XP_004240204.1| PREDICTED: late blight resistance protein R1...    56   6e-06

>ref|XP_004240304.1| PREDICTED: putative late blight resistance protein homolog
           R1C-3-like [Solanum lycopersicum]
          Length = 1320

 Score = 59.7 bits (143), Expect = 4e-07
 Identities = 38/106 (35%), Positives = 62/106 (58%)
 Frame = +1

Query: 22  FISSLLQNLNDVVKDSRADTGISLVKHDIVELEKELLCLRHDFSEITKIPREFELLNHQW 201
           F++ LL NL D+V DS A + ++L+K +I +++++L  +R  F        E EL    W
Sbjct: 444 FMTFLLTNLKDLV-DSNASS-VALIKEEIKQVKEDLEIIRSYFGYA-----EQELHRDLW 496

Query: 202 TRFNDVIYQAEYVIDLFLATGCPLMNFRFGMSDVIEKIKTIRTELQ 339
           TR  DV Y+ E+ I+  LA    L+   F + D+++KIK +R E+Q
Sbjct: 497 TRVLDVAYETEHAINSILARDHGLLQLIFVLLDIVKKIKLVRKEVQ 542


>ref|XP_006357610.1| PREDICTED: putative late blight resistance protein homolog
           R1B-17-like [Solanum tuberosum]
          Length = 1273

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 46/147 (31%), Positives = 71/147 (48%), Gaps = 1/147 (0%)
 Frame = +1

Query: 1   PQTNFQGFISSLLQNLNDVVKDSRADTGIS-LVKHDIVELEKELLCLRHDFSEITKIPRE 177
           P      F+ SLL+ LN+++K   ++TG+  ++K  I  LEKEL  L + F +  K+  E
Sbjct: 407 PTVGGLSFVDSLLRKLNEMLK---SETGLGFMMKPHIGILEKELSSLTYVFKDAAKVQHE 463

Query: 178 FELLNHQWTRFNDVIYQAEYVIDLFLATGCPLMNFRFGMSDVIEKIKTIRTELQIIQSKL 357
            E+L         + Y+AE  ID  L     L +    +  +I++IK I TE+  + S  
Sbjct: 464 HEVLKDFQKYTVSLAYEAEVAIDFILVQYNVLEHCFCSLPGIIKEIKHIYTEVTKMWS-- 521

Query: 358 KNDDSLGHQVASFSSHVSSETDPLPND 438
           KN     + V   S H+  E   L ND
Sbjct: 522 KNLSVRPYSVVELSKHLPIEYSNLMND 548


>ref|XP_006367893.1| PREDICTED: putative late blight resistance protein homolog
           R1C-3-like, partial [Solanum tuberosum]
          Length = 561

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 35/113 (30%), Positives = 62/113 (54%)
 Frame = +1

Query: 1   PQTNFQGFISSLLQNLNDVVKDSRADTGISLVKHDIVELEKELLCLRHDFSEITKIPREF 180
           P ++   F++ LL NL D+V  + +   +S++K +I +++++L  +R  F        E 
Sbjct: 311 PMSDGPLFMTLLLTNLKDLVNSNASS--VSMIKEEIKQVKQDLEIIRSFFGY-----GEQ 363

Query: 181 ELLNHQWTRFNDVIYQAEYVIDLFLATGCPLMNFRFGMSDVIEKIKTIRTELQ 339
           EL    WT   D+ Y+AE+ I+  LA    L+   F + D +EKIK ++ E+Q
Sbjct: 364 ELHRDLWTHVLDLSYEAEHAINSILARDHGLLQLIFILPDTVEKIKLVKKEVQ 416


>ref|XP_004240205.1| PREDICTED: putative late blight resistance protein homolog
           R1C-3-like [Solanum lycopersicum]
          Length = 1243

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 39/125 (31%), Positives = 66/125 (52%)
 Frame = +1

Query: 1   PQTNFQGFISSLLQNLNDVVKDSRADTGISLVKHDIVELEKELLCLRHDFSEITKIPREF 180
           P ++   F++ LL NL D+   +     +SL+K +I +++++L  +R  F+       E 
Sbjct: 375 PMSDGPLFMTLLLTNLKDLAYSNAYS--VSLIKEEIKQVKQDLEIIRSLFAYA-----EQ 427

Query: 181 ELLNHQWTRFNDVIYQAEYVIDLFLATGCPLMNFRFGMSDVIEKIKTIRTELQIIQSKLK 360
           EL    WTR  DV ++AE+V +  LA    L+   F + D +EKIK ++ E   +Q KL 
Sbjct: 428 ELHKDLWTRVLDVAHEAEHVFNSILARDNGLVQLFFMLPDTVEKIKLVKKE---VQEKLP 484

Query: 361 NDDSL 375
              S+
Sbjct: 485 KSSSI 489


>ref|XP_004240204.1| PREDICTED: late blight resistance protein R1-A-like [Solanum
           lycopersicum]
          Length = 1247

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 36/113 (31%), Positives = 61/113 (53%)
 Frame = +1

Query: 1   PQTNFQGFISSLLQNLNDVVKDSRADTGISLVKHDIVELEKELLCLRHDFSEITKIPREF 180
           P ++   F++ LL NL D+VK + +   +SL+K +I +++++L  +R  F  +     E 
Sbjct: 388 PMSDGPLFMTLLLTNLGDLVKSNASS--VSLIKEEIKQVKEDLEIIRSLFGYV-----EQ 440

Query: 181 ELLNHQWTRFNDVIYQAEYVIDLFLATGCPLMNFRFGMSDVIEKIKTIRTELQ 339
           EL    WT   D  Y+AE+  +  LA    L+     + D IEKIK ++ E+Q
Sbjct: 441 ELHRDLWTCVLDTAYEAEHAFNSILARDHGLLQLILILPDTIEKIKLVKKEVQ 493


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