BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029888
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004247893.1| PREDICTED: pentatricopeptide repeat-containi...    97   3e-18
ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containi...    95   1e-17
gb|EMJ22511.1| hypothetical protein PRUPE_ppa026098mg [Prunus pe...    94   1e-17
ref|XP_006360920.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_002520617.1| pentatricopeptide repeat-containing protein,...    90   3e-16
ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...    89   5e-16
ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protei...    89   6e-16
ref|XP_004297007.1| PREDICTED: pentatricopeptide repeat-containi...    88   1e-15
ref|XP_002298671.2| pentatricopeptide repeat-containing family p...    87   2e-15
ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Caps...    86   4e-15
gb|EXB73690.1| hypothetical protein L484_026851 [Morus notabilis]      86   7e-15
ref|NP_193141.2| pentatricopeptide repeat-containing protein [Ar...    86   7e-15
ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutr...    84   2e-14
ref|XP_006492529.1| PREDICTED: pentatricopeptide repeat-containi...    83   4e-14
ref|XP_006492528.1| PREDICTED: pentatricopeptide repeat-containi...    83   4e-14
ref|XP_006421034.1| hypothetical protein CICLE_v10004567mg [Citr...    83   4e-14
ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [A...    75   7e-12
emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana] gi|7...    74   2e-11
gb|EPS68340.1| hypothetical protein M569_06429 [Genlisea aurea]        70   2e-10

>ref|XP_004247893.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Solanum lycopersicum]
          Length = 610

 Score = 96.7 bits (239), Expect = 3e-18
 Identities = 48/96 (50%), Positives = 62/96 (64%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M +   LHQL++C     P+  +K+HAHI+K GL   S  L N LID+YGK G   +A +
Sbjct: 1   MQHFHFLHQLQRCARFHFPTEGRKLHAHIIKIGLYDCSLKLCNNLIDMYGKCGLLDDALQ 60

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKM 14
           +FDEM  RDL SWAS+ TAHN+AN   +TL LF  M
Sbjct: 61  LFDEMHHRDLASWASVFTAHNEANQPQKTLLLFRNM 96


>ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score = 94.7 bits (234), Expect = 1e-17
 Identities = 48/96 (50%), Positives = 67/96 (69%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M YS L++QL+ C   Q+P   +K+H HI+KTG+  +   LSN LI++YGK G  ++A  
Sbjct: 1   MCYSHLVYQLQACARHQSPPIGKKLHCHIIKTGI-DQCKSLSNNLINMYGKCGLIQDALN 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKM 14
           +F+++  RD  SWASILTA+NQANL H TLS+F  M
Sbjct: 60  LFNQLPHRDPISWASILTANNQANLPHLTLSMFPAM 95


>gb|EMJ22511.1| hypothetical protein PRUPE_ppa026098mg [Prunus persica]
          Length = 610

 Score = 94.4 bits (233), Expect = 1e-17
 Identities = 50/100 (50%), Positives = 64/100 (64%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M  S  LHQL+ C  R+TPS ++++HA ++KT L      L N L+D YGK G   +A  
Sbjct: 1   MPASHFLHQLQLCARRRTPSTAKRLHAQLIKTAL-HLCVPLPNTLLDTYGKCGLVEDALH 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           +F EM  RD  SWASILTAHNQAN+ H+TLS+F  M   D
Sbjct: 60  LFGEMPHRDHVSWASILTAHNQANMPHRTLSMFPAMFESD 99


>ref|XP_006360920.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Solanum tuberosum]
          Length = 610

 Score = 94.0 bits (232), Expect = 2e-17
 Identities = 48/96 (50%), Positives = 63/96 (65%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M +   LHQLR+C     P+  +K+HA I+K GL + S  L N LID+YGK G   +A +
Sbjct: 1   MQHFHFLHQLRRCARFHFPAEGRKLHALIIKIGLYNCSLRLCNNLIDMYGKCGLLDDAFQ 60

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKM 14
           +FDEM QRDL SWAS+ TAHN+AN   +TL LF  +
Sbjct: 61  LFDEMPQRDLASWASVFTAHNEANQPQKTLFLFPNL 96


>ref|XP_002520617.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223540178|gb|EEF41753.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 344

 Score = 90.1 bits (222), Expect = 3e-16
 Identities = 50/100 (50%), Positives = 65/100 (65%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M  S  LHQL+ C  RQTP  ++K+HA I+K  L   S  L N L++ YGK G  ++A  
Sbjct: 1   MQISHYLHQLQLCGKRQTPLTAKKLHAQIIKLSL-KESEPLPNTLLNAYGKCGLLQDAYF 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           +F+EM QRD  SWASILTA+N ANL ++TLS+F  M   D
Sbjct: 60  LFEEMPQRDHVSWASILTAYNLANLPNKTLSIFPTMFIVD 99


>ref|XP_004156841.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g14050, mitochondrial-like [Cucumis sativus]
          Length = 611

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M+ S  LHQL+ C  RQ+ S + ++H+ I+K G   +S+ LSN L+D+YGK G    A +
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGF-DKSSLLSNTLLDVYGKCGLIPQALQ 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           +FDEM  RD  SWASILTAHN+A +  +TLS+   M   D
Sbjct: 60  LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHD 99


>ref|XP_004152256.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Cucumis sativus]
          Length = 611

 Score = 89.4 bits (220), Expect = 5e-16
 Identities = 47/100 (47%), Positives = 65/100 (65%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M+ S  LHQL+ C  RQ+ S + ++H+ I+K G   +S+ LSN L+D+YGK G    A +
Sbjct: 1   MNISHFLHQLQLCARRQSASAAGELHSQIIKAGF-DKSSLLSNTLLDVYGKCGLIPQALQ 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           +FDEM  RD  SWASILTAHN+A +  +TLS+   M   D
Sbjct: 60  LFDEMPNRDHVSWASILTAHNKALIPRRTLSMLNTMFTHD 99


>gb|EOY05127.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao]
          Length = 610

 Score = 89.0 bits (219), Expect = 6e-16
 Identities = 46/99 (46%), Positives = 65/99 (65%)
 Frame = -2

Query: 298 HYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKV 119
           HY   LHQL+ C    +P  ++++HAH +K GL + S+ + N LI++Y K    + A ++
Sbjct: 5   HY---LHQLQNCAKHHSPCSTKQLHAHFIKLGL-THSSPVLNTLINVYAKCSLLQEAIQL 60

Query: 118 FDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           FDEM QRD  SWA++LTAHNQAN   +TLSLF  M + D
Sbjct: 61  FDEMPQRDHVSWATVLTAHNQANFPDKTLSLFPSMFSLD 99


>ref|XP_004297007.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Fragaria vesca subsp. vesca]
          Length = 610

 Score = 87.8 bits (216), Expect = 1e-15
 Identities = 47/100 (47%), Positives = 63/100 (63%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M  S  LHQL+ C    TPS ++ +HA ++KT L  +   L N L+ +Y K G  ++A  
Sbjct: 1   MPVSRYLHQLKLCARNHTPSTAKTLHAQLIKTAL-HQCVPLPNTLLHVYAKCGLLQDALH 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           +FDEM  RD  +WAS+LTA NQANLSH+TLS+F  M   D
Sbjct: 60  LFDEMPHRDHVTWASLLTALNQANLSHRTLSIFPTMFQSD 99


>ref|XP_002298671.2| pentatricopeptide repeat-containing family protein [Populus
           trichocarpa] gi|550348740|gb|EEE83476.2|
           pentatricopeptide repeat-containing family protein
           [Populus trichocarpa]
          Length = 634

 Score = 87.0 bits (214), Expect = 2e-15
 Identities = 46/94 (48%), Positives = 63/94 (67%)
 Frame = -2

Query: 283 LHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKVFDEMF 104
           LH+L+ C   Q P  ++K+HA I+K+GL ++   L N L+D YGK    ++A  +FDEM 
Sbjct: 31  LHRLKLCTKHQAPLNAKKLHAQIVKSGL-NQCQPLPNTLLDAYGKCNLLQDAHYLFDEMP 89

Query: 103 QRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           QRD  SWASILTA+NQA L ++TLS+F  M   D
Sbjct: 90  QRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTD 123


>ref|XP_006283355.1| hypothetical protein CARUB_v10004398mg [Capsella rubella]
           gi|482552060|gb|EOA16253.1| hypothetical protein
           CARUB_v10004398mg [Capsella rubella]
          Length = 612

 Score = 86.3 bits (212), Expect = 4e-15
 Identities = 46/97 (47%), Positives = 66/97 (68%)
 Frame = -2

Query: 298 HYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKV 119
           HY   LHQL+ C   +T +  + +HAHI+K G+  +   L+N L+++YGK G    A K+
Sbjct: 5   HY---LHQLQLCARNRTLTTGKALHAHIVKLGI-VQCCPLANTLVNVYGKCGAASYALKL 60

Query: 118 FDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSA 8
           FDEM QRD  +WAS+LTA NQANLS +TLS+F+ + +
Sbjct: 61  FDEMPQRDHIAWASVLTALNQANLSGKTLSVFSSVGS 97


>gb|EXB73690.1| hypothetical protein L484_026851 [Morus notabilis]
          Length = 562

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 47/100 (47%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
 Frame = -2

Query: 298 HYSELLHQLRQCINRQTPSRS-QKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           HY   LHQL+ C  RQT S + +K+HA ++KTG+        N L+D Y K G   NA++
Sbjct: 5   HY---LHQLKLCAKRQTTSSTIKKLHAQLIKTGIAQHEP-FPNTLLDAYAKCGFLNNARQ 60

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           +FDEM QRDL SWAS+LT +N ++L  +TL  F  M A D
Sbjct: 61  LFDEMPQRDLVSWASLLTTYNHSDLPRRTLFTFHSMFAVD 100


>ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|223635650|sp|O23266.3|PP308_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
           gi|332657965|gb|AEE83365.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/97 (46%), Positives = 67/97 (69%)
 Frame = -2

Query: 298 HYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKV 119
           HY   LHQL+ C   +T + ++ +HAHI+K G+  +   L+N L+++YGK G   +A +V
Sbjct: 5   HY---LHQLQLCARNRTLTTAKALHAHIVKLGI-VQCCPLANTLVNVYGKCGAASHALQV 60

Query: 118 FDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSA 8
           FDEM  RD  +WAS+LTA NQANLS +TLS+F+ + +
Sbjct: 61  FDEMPHRDHIAWASVLTALNQANLSGKTLSVFSSVGS 97


>ref|XP_006414819.1| hypothetical protein EUTSA_v10024703mg [Eutrema salsugineum]
           gi|557115989|gb|ESQ56272.1| hypothetical protein
           EUTSA_v10024703mg [Eutrema salsugineum]
          Length = 609

 Score = 84.0 bits (206), Expect = 2e-14
 Identities = 45/96 (46%), Positives = 64/96 (66%)
 Frame = -2

Query: 298 HYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKV 119
           HY   LHQL+ C   +T + ++ +HA I K G+  +   L+N L+++YGK G   +A K+
Sbjct: 5   HY---LHQLKLCARNRTLNTAKSLHAQIFKIGI-IQCCPLANTLVNVYGKCGSASHALKL 60

Query: 118 FDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMS 11
           FDEM  RD  +WAS+LTA NQ+NLS +TLSLF+  S
Sbjct: 61  FDEMPHRDHIAWASVLTALNQSNLSGKTLSLFSSSS 96


>ref|XP_006492529.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like isoform X2 [Citrus sinensis]
          Length = 610

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/100 (47%), Positives = 59/100 (59%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M  S  LH+LR C   Q     + +HA I+K GL      L N LID YGK    + A  
Sbjct: 1   MQISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGP-LPNTLIDAYGKCDLVQYAHH 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           + +EM QRD  SWASILTA+NQANL  +T+S+F+ M A D
Sbjct: 60  LLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99


>ref|XP_006492528.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like isoform X1 [Citrus sinensis]
          Length = 623

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/100 (47%), Positives = 59/100 (59%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M  S  LH+LR C   Q     + +HA I+K GL      L N LID YGK    + A  
Sbjct: 1   MQISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGP-LPNTLIDAYGKCDLVQYAHH 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           + +EM QRD  SWASILTA+NQANL  +T+S+F+ M A D
Sbjct: 60  LLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99


>ref|XP_006421034.1| hypothetical protein CICLE_v10004567mg [Citrus clementina]
           gi|557522907|gb|ESR34274.1| hypothetical protein
           CICLE_v10004567mg [Citrus clementina]
          Length = 610

 Score = 82.8 bits (203), Expect = 4e-14
 Identities = 47/100 (47%), Positives = 59/100 (59%)
 Frame = -2

Query: 301 MHYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQK 122
           M  S  LH+LR C   Q     + +HA I+K GL      L N LID YGK    + A  
Sbjct: 1   MQISHYLHRLRVCARHQIALTVKTLHAQIIKLGLHQYGP-LPNTLIDAYGKCDLVQYAHH 59

Query: 121 VFDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           + +EM QRD  SWASILTA+NQANL  +T+S+F+ M A D
Sbjct: 60  LLEEMPQRDHVSWASILTAYNQANLPQKTISIFSTMLALD 99


>ref|XP_006827023.1| hypothetical protein AMTR_s00010p00221030 [Amborella trichopoda]
           gi|548831452|gb|ERM94260.1| hypothetical protein
           AMTR_s00010p00221030 [Amborella trichopoda]
          Length = 645

 Score = 75.5 bits (184), Expect = 7e-12
 Identities = 40/99 (40%), Positives = 61/99 (61%)
 Frame = -2

Query: 298 HYSELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKV 119
           HY+ LLH    C+  + P+  + IHAHI K GL + S  L+N+LI+LY K G   ++QK+
Sbjct: 13  HYASLLHS---CLRTRNPTSPKSIHAHITKHGLHA-SAFLTNLLINLYSKCGSLSSSQKL 68

Query: 118 FDEMFQRDLFSWASILTAHNQANLSHQTLSLFTKMSAFD 2
           FDEM Q++  SW +I++A+ +A        LF K+  +D
Sbjct: 69  FDEMLQKNTSSWNTIISAYAKAGDFDSAHHLFNKIPEWD 107


>emb|CAB46001.1| hypothetical protein [Arabidopsis thaliana]
           gi|7268109|emb|CAB78447.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 686

 Score = 74.3 bits (181), Expect = 2e-11
 Identities = 38/82 (46%), Positives = 59/82 (71%)
 Frame = -2

Query: 253 QTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKVFDEMFQRDLFSWASI 74
           +T + ++ +HAHI+K G+  +   L+N L+++YGK G   +A +VFDEM  RD  +WAS+
Sbjct: 85  RTLTTAKALHAHIVKLGI-VQCCPLANTLVNVYGKCGAASHALQVFDEMPHRDHIAWASV 143

Query: 73  LTAHNQANLSHQTLSLFTKMSA 8
           LTA NQANLS +TLS+F+ + +
Sbjct: 144 LTALNQANLSGKTLSVFSSVGS 165


>gb|EPS68340.1| hypothetical protein M569_06429 [Genlisea aurea]
          Length = 618

 Score = 70.5 bits (171), Expect = 2e-10
 Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 2/97 (2%)
 Frame = -2

Query: 292 SELLHQLRQCINRQTPSRSQKIHAHILKTGLGSRSTHLSNILIDLYGKFGQHRNAQKVFD 113
           S +L ++++C + + P   + +HA  +K+G+       +N L+D+YGK G  ++A +VFD
Sbjct: 6   SLILQRIKKCRDLRLPIHGRTLHARCIKSGMAP----FANALLDMYGKCGHPKDAAQVFD 61

Query: 112 EMFQ--RDLFSWASILTAHNQANLSHQTLSLFTKMSA 8
           EM +  RDL SWASI TA+N ANL    + LF    A
Sbjct: 62  EMPKSGRDLISWASIFTAYNLANLPSYPVLLFPSFMA 98