BLASTX nr result
ID: Catharanthus23_contig00029636
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00029636
(277 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621... 52 4e-12
ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626... 49 5e-12
gb|EMJ26701.1| hypothetical protein PRUPE_ppa025289mg [Prunus pe... 50 1e-10
gb|EOX94469.1| Uncharacterized protein TCM_004053 [Theobroma cacao] 46 2e-10
gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus pe... 45 1e-09
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 46 2e-09
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 45 3e-09
gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [... 47 5e-09
gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam... 44 7e-09
emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|72677... 44 7e-09
emb|CAB75484.1| putative protein [Arabidopsis thaliana] 44 7e-09
ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608... 46 9e-09
gb|EMJ20911.1| hypothetical protein PRUPE_ppa025856mg, partial [... 47 9e-09
gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Ja... 43 1e-08
gb|ABB46931.2| retrotransposon protein, putative, unclassified [... 43 1e-08
ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [S... 42 1e-08
gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indi... 47 1e-08
gb|ABF95850.1| retrotransposon protein, putative, unclassified [... 47 1e-08
gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japo... 47 1e-08
gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indi... 47 1e-08
>ref|XP_006485449.1| PREDICTED: uncharacterized protein LOC102621413 [Citrus sinensis]
Length = 2303
Score = 52.0 bits (123), Expect(2) = 4e-12
Identities = 24/48 (50%), Positives = 31/48 (64%)
Frame = +2
Query: 14 GRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
G A NHTF+ALI KT K +V +RPI LCNV Y+ + K I++ L
Sbjct: 456 GGNLSALNHTFIALIPKTTKPKKVTEFRPISLCNVIYRIVAKTIANRL 503
Score = 44.3 bits (103), Expect(2) = 4e-12
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
L+ +L QII P Q+AFIPNR I+DN II +E +H +G
Sbjct: 503 LKPILSQIISPTQSAFIPNRLISDNVIIGYECLHKIRHSQG 543
>ref|XP_006491472.1| PREDICTED: uncharacterized protein LOC102626455 [Citrus sinensis]
Length = 1452
Score = 49.3 bits (116), Expect(2) = 5e-12
Identities = 21/41 (51%), Positives = 29/41 (70%)
Frame = +2
Query: 35 NHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
NHTF+ALI K +K +V +RPI LCNV Y+ + K I++ L
Sbjct: 580 NHTFIALIPKVEKPRKVMEFRPISLCNVVYRIVAKAIANRL 620
Score = 47.0 bits (110), Expect(2) = 5e-12
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
L+ +L+ II PNQ+AFIPNR I DN II +E +H KG
Sbjct: 620 LKPILNHIISPNQSAFIPNRLITDNVIIGYECLHKIRLSKG 660
>gb|EMJ26701.1| hypothetical protein PRUPE_ppa025289mg [Prunus persica]
Length = 637
Score = 50.4 bits (119), Expect(2) = 1e-10
Identities = 25/51 (49%), Positives = 31/51 (60%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
FL NHT +ALI K D V+++RPI LCNV YK IT+II + L
Sbjct: 446 FLNNLPLNPINHTNIALIPKIDNPEVVDHFRPIGLCNVIYKIITEIIITRL 496
Score = 40.8 bits (94), Expect(2) = 1e-10
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
LR +L + I NQ AF P RSI DN +I HE+ F KKG
Sbjct: 496 LRPILTKCISLNQGAFAPGRSIFDNILIAHELFSDFKRKKG 536
>gb|EOX94469.1| Uncharacterized protein TCM_004053 [Theobroma cacao]
Length = 359
Score = 46.2 bits (108), Expect(2) = 2e-10
Identities = 19/40 (47%), Positives = 30/40 (75%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKK 273
++ +L+Q+I NQ+AF+P R I DN I+ HEI+HH + K+
Sbjct: 275 IKPILNQVIADNQSAFVPGRLILDNIIVAHEIIHHLHNKR 314
Score = 44.3 bits (103), Expect(2) = 2e-10
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Frame = +2
Query: 5 FLRGRM-FRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
FL G F+ NHT + LI K + ++ +RPI LCNV YK +K++++ +
Sbjct: 224 FLEGSFPFQDINHTLIVLIPKIAQVEQIFQFRPINLCNVLYKITSKVLTNRI 275
>gb|EMJ11928.1| hypothetical protein PRUPE_ppa021798mg [Prunus persica]
Length = 1171
Score = 45.4 bits (106), Expect(2) = 1e-09
Identities = 22/41 (53%), Positives = 25/41 (60%)
Frame = +2
Query: 35 NHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
NHT +A I K V ++RPI CNV YK ITKII S L
Sbjct: 507 NHTNIAFIPKVASPESVNHFRPISFCNVSYKIITKIIVSRL 547
Score = 42.4 bits (98), Expect(2) = 1e-09
Identities = 21/41 (51%), Positives = 25/41 (60%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
LR +L + I NQ AF P RSI DN +I HE+ H F K G
Sbjct: 547 LRPILAKSISKNQGAFAPGRSIFDNILITHELFHDFKHKNG 587
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 45.8 bits (107), Expect(2) = 2e-09
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = +2
Query: 8 LRGRMF-RAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
L GR F N TF+ LI K D +++RPI LCN+ YK +TK+I + L
Sbjct: 482 LSGRDFPEGFNDTFIVLIPKMDIPQLAKHFRPIGLCNIVYKIVTKVIINRL 532
Score = 41.6 bits (96), Expect(2) = 2e-09
Identities = 18/41 (43%), Positives = 25/41 (60%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
L+ +L +I P Q +F+PNR I DN II E+ H K+G
Sbjct: 532 LKPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQG 572
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 45.1 bits (105), Expect(2) = 3e-09
Identities = 23/53 (43%), Positives = 30/53 (56%)
Frame = +2
Query: 20 MFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSLGMFWIKL 178
+ + N T +ALI K +YRPI LCN YK +TKII+S L F +L
Sbjct: 1089 LLQVMNRTHLALIPKVKAPTHPSHYRPIALCNFSYKILTKIIASRLQPFMSEL 1141
Score = 41.6 bits (96), Expect(2) = 3e-09
Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHF----NCKKG 276
L+ + ++I NQ+AF+ NR I DN II HEI HH +C G
Sbjct: 1134 LQPFMSELISDNQSAFVSNRQIQDNVIIAHEIYHHLKLTRSCNNG 1178
>gb|EMJ00096.1| hypothetical protein PRUPE_ppa015748mg, partial [Prunus persica]
Length = 949
Score = 47.0 bits (110), Expect(2) = 5e-09
Identities = 22/51 (43%), Positives = 30/51 (58%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
F G + + NHT V LI K R+ RPI LCNV YK I+K++++ L
Sbjct: 299 FRTGYILKKINHTHVVLIPKVASPTRMTQLRPISLCNVIYKVISKVLTNRL 349
Score = 38.9 bits (89), Expect(2) = 5e-09
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCK 270
L+ VL I PNQ AF+ + I DN +I H+++H K
Sbjct: 349 LKRVLPHFISPNQTAFVSGQQITDNVLIVHKVLHSLKTK 387
>gb|AAC33961.1| contains similarity to reverse trancriptase (Pfam: rvt.hmm, score:
42.57) [Arabidopsis thaliana]
Length = 1662
Score = 44.3 bits (103), Expect(2) = 7e-09
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKK 273
L+ LD I+ +QAAFIP R +NDN +I HE+MH +K
Sbjct: 907 LKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRK 946
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
F M ++ NHT + +I K + YRPI LCNV YK I+K + L
Sbjct: 857 FRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERL 907
>emb|CAB40051.1| putative protein [Arabidopsis thaliana] gi|7267781|emb|CAB81184.1|
putative protein [Arabidopsis thaliana]
Length = 1294
Score = 44.3 bits (103), Expect(2) = 7e-09
Identities = 20/40 (50%), Positives = 27/40 (67%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKK 273
L+ LD I+ +QAAFIP R +NDN +I HE+MH +K
Sbjct: 887 LKGHLDAIVSDSQAAFIPGRLVNDNVMIAHEMMHSLKTRK 926
Score = 41.2 bits (95), Expect(2) = 7e-09
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
F M ++ NHT + +I K + YRPI LCNV YK I+K + L
Sbjct: 837 FRTSYMKQSINHTNICMIPKITNPETLSDYRPIALCNVLYKIISKCLVERL 887
>emb|CAB75484.1| putative protein [Arabidopsis thaliana]
Length = 851
Score = 43.5 bits (101), Expect(2) = 7e-09
Identities = 21/40 (52%), Positives = 27/40 (67%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKK 273
L+ L+ I+ +QAAFIP R INDN +I HEIMH +K
Sbjct: 146 LKAHLNSIVSDSQAAFIPGRIINDNVMIAHEIMHSLKVRK 185
Score = 42.0 bits (97), Expect(2) = 7e-09
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
F M + NHT + +I K + YRPI LCNV YK I+K + + L
Sbjct: 96 FESSHMKTSVNHTNICMIPKIQNPQTLSDYRPIALCNVLYKVISKCMVNRL 146
>ref|XP_006494016.1| PREDICTED: uncharacterized protein LOC102608298 [Citrus sinensis]
Length = 1570
Score = 45.8 bits (107), Expect(2) = 9e-09
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +2
Query: 35 NHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
NHT++ LI K K +V +RPI LCNV Y+ + K I++ L
Sbjct: 421 NHTYIVLISKKGKPRKVTDFRPISLCNVIYRIVAKAIANRL 461
Score = 39.3 bits (90), Expect(2) = 9e-09
Identities = 20/41 (48%), Positives = 27/41 (65%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
L+NVL ++I Q+AFIPNR I DN I+ +E +H KG
Sbjct: 461 LKNVLPKLISLMQSAFIPNRLIADNIIVGYECLHKIRHCKG 501
>gb|EMJ20911.1| hypothetical protein PRUPE_ppa025856mg, partial [Prunus persica]
Length = 413
Score = 47.0 bits (110), Expect(2) = 9e-09
Identities = 22/41 (53%), Positives = 28/41 (68%)
Frame = +2
Query: 35 NHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
NHT +ALI K + V +YRPI LCNV YK I+KI+ + L
Sbjct: 25 NHTNIALIPKVNSPKTVNHYRPICLCNVSYKIISKILVNQL 65
Score = 38.1 bits (87), Expect(2) = 9e-09
Identities = 19/41 (46%), Positives = 24/41 (58%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
LR +L + I N+ AF RSI DN +I HE+ H F KG
Sbjct: 65 LRPILSKCISKNRGAFALGRSIFDNILIAHELFHDFKRNKG 105
>gb|AAM01179.2|AC113336_31 Putative retroelement [Oryza sativa Japonica Group]
Length = 1888
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
F G M N T + LI KT++ ++ +RPI LCNV YK ++K + + L
Sbjct: 1046 FSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 1096
Score = 41.6 bits (96), Expect(2) = 1e-08
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKK 273
LR +LD ++ NQ+AF+P R I DN +I E HH K
Sbjct: 1096 LRPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNK 1135
>gb|ABB46931.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1853
Score = 43.1 bits (100), Expect(2) = 1e-08
Identities = 20/51 (39%), Positives = 30/51 (58%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
F G M N T + LI KT++ ++ +RPI LCNV YK ++K + + L
Sbjct: 1011 FSLGTMPSGVNETAIVLIPKTEQPQELKDFRPISLCNVVYKIVSKCLVNRL 1061
Score = 41.6 bits (96), Expect(2) = 1e-08
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKK 273
LR +LD ++ NQ+AF+P R I DN +I E HH K
Sbjct: 1061 LRPILDDLVSQNQSAFVPGRLITDNALIAFEYFHHIQRNK 1100
>ref|XP_002443080.1| hypothetical protein SORBIDRAFT_08g007680 [Sorghum bicolor]
gi|241943773|gb|EES16918.1| hypothetical protein
SORBIDRAFT_08g007680 [Sorghum bicolor]
Length = 649
Score = 42.4 bits (98), Expect(2) = 1e-08
Identities = 23/55 (41%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Frame = +2
Query: 5 FLRGRMFRA-ANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSLGMF 166
FL G A NHT + LI KT + +RPI LCNV YK +K+++ L F
Sbjct: 35 FLNGGTLPADINHTTIVLIPKTRNPQGMTEFRPISLCNVLYKICSKVLALRLREF 89
Score = 42.4 bits (98), Expect(2) = 1e-08
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHHFNCKKG 276
LR LD+II Q+AF+P R I DN +I +E +H+ +KG
Sbjct: 86 LREFLDEIISEEQSAFVPGRLITDNVLISYECIHYLKRRKG 126
>gb|EEC75227.1| hypothetical protein OsI_11496 [Oryza sativa Indica Group]
Length = 1059
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
FL+G M N T + LI K K +++ +RPI LCNV YK ++K + + L
Sbjct: 233 FLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRL 283
Score = 37.4 bits (85), Expect(2) = 1e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHH 258
LR +L II Q+AFIP R I DN +I E +HH
Sbjct: 283 LRPILKDIISVTQSAFIPERLITDNALIAFECIHH 317
>gb|ABF95850.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 940
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
FL+G M N T + LI K K +++ +RPI LCNV YK ++K + + L
Sbjct: 198 FLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRL 248
Score = 37.4 bits (85), Expect(2) = 1e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHH 258
LR +L II Q+AFIP R I DN +I E +HH
Sbjct: 248 LRPILKDIISVTQSAFIPERLITDNALIAFECIHH 282
>gb|EEE59033.1| hypothetical protein OsJ_10782 [Oryza sativa Japonica Group]
Length = 850
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
FL+G M N T + LI K K +++ +RPI LCNV YK ++K + + L
Sbjct: 198 FLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRL 248
Score = 37.4 bits (85), Expect(2) = 1e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHH 258
LR +L II Q+AFIP R I DN +I E +HH
Sbjct: 248 LRPILKDIISVTQSAFIPERLITDNALIAFECIHH 282
>gb|EEC75230.1| hypothetical protein OsI_11503 [Oryza sativa Indica Group]
Length = 746
Score = 47.0 bits (110), Expect(2) = 1e-08
Identities = 21/51 (41%), Positives = 31/51 (60%)
Frame = +2
Query: 5 FLRGRMFRAANHTFVALIQKTDKTHRVEYYRPIPLCNVFYKTITKIISSSL 157
FL+G M N T + LI K K +++ +RPI LCNV YK ++K + + L
Sbjct: 93 FLQGVMLAGVNDTSIVLIPKVSKPEQLKEFRPISLCNVIYKVVSKCMVNRL 143
Score = 37.4 bits (85), Expect(2) = 1e-08
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 154 LRNVLDQIIFPNQAAFIPNRSINDNNIIFHEIMHH 258
LR +L II Q+AFIP R I DN +I E +HH
Sbjct: 143 LRPILKDIISVTQSAFIPERLITDNALIAFECIHH 177