BLASTX nr result
ID: Catharanthus23_contig00029534
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00029534
(382 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004252881.1| PREDICTED: pentatricopeptide repeat-containi... 116 3e-24
ref|XP_006349785.1| PREDICTED: pentatricopeptide repeat-containi... 114 1e-23
gb|EOY32979.1| Pentatricopeptide repeat superfamily protein [The... 114 2e-23
ref|XP_004289315.1| PREDICTED: pentatricopeptide repeat-containi... 108 1e-21
ref|XP_006470514.1| PREDICTED: pentatricopeptide repeat-containi... 107 1e-21
ref|XP_006446349.1| hypothetical protein CICLE_v10018197mg [Citr... 107 2e-21
ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containi... 107 2e-21
emb|CBI35582.3| unnamed protein product [Vitis vinifera] 107 2e-21
ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containi... 106 3e-21
ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containi... 106 3e-21
ref|XP_004513219.1| PREDICTED: pentatricopeptide repeat-containi... 106 4e-21
gb|EMJ09476.1| hypothetical protein PRUPE_ppa015109mg [Prunus pe... 106 4e-21
gb|ESW18147.1| hypothetical protein PHAVU_006G016700g [Phaseolus... 104 1e-20
gb|EXB63374.1| hypothetical protein L484_002623 [Morus notabilis] 102 4e-20
ref|XP_002313273.1| hypothetical protein POPTR_0009s07140g [Popu... 102 7e-20
ref|XP_006664469.1| PREDICTED: pentatricopeptide repeat-containi... 98 1e-18
gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sat... 98 1e-18
gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japo... 98 1e-18
ref|NP_001066509.1| Os12g0256900 [Oryza sativa Japonica Group] g... 98 1e-18
ref|XP_004963485.1| PREDICTED: pentatricopeptide repeat-containi... 96 7e-18
>ref|XP_004252881.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Solanum lycopersicum]
Length = 672
Score = 116 bits (291), Expect = 3e-24
Identities = 51/77 (66%), Positives = 63/77 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG WAAEHL +++P H GYY LLSNMYAEAGRW +AD IREMM LRGVKKNPG SW
Sbjct: 596 GNVELGSWAAEHLFKMQPHHPGYYALLSNMYAEAGRWGEADSIREMMKLRGVKKNPGCSW 655
Query: 202 VPKQDQMYSFLATKRPG 152
+ QD++++F+ ++ G
Sbjct: 656 IQIQDKVHAFIVGQKTG 672
>ref|XP_006349785.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Solanum tuberosum]
Length = 809
Score = 114 bits (286), Expect = 1e-23
Identities = 51/75 (68%), Positives = 62/75 (82%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNV+LG WAAEHL +L+P H GYY LLSNMYAEAGRW +AD IRE+M LRGVKKNPG SW
Sbjct: 723 GNVDLGSWAAEHLFKLQPHHPGYYALLSNMYAEAGRWGEADSIRELMKLRGVKKNPGCSW 782
Query: 202 VPKQDQMYSFLATKR 158
V QD++++F+ +R
Sbjct: 783 VQIQDKVHAFIVGQR 797
>gb|EOY32979.1| Pentatricopeptide repeat superfamily protein [Theobroma cacao]
Length = 788
Score = 114 bits (284), Expect = 2e-23
Identities = 49/75 (65%), Positives = 65/75 (86%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELGCWAAE+L +L+P SGYY +LSN++AEAG+W+DA+RIRE+M LRG +KNPG SW
Sbjct: 700 GNVELGCWAAENLFKLKPQDSGYYTILSNLFAEAGKWDDANRIRELMKLRGARKNPGCSW 759
Query: 202 VPKQDQMYSFLATKR 158
V QDQ+++F+A +R
Sbjct: 760 VHIQDQVHAFVAGQR 774
>ref|XP_004289315.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g16860-like [Fragaria vesca subsp. vesca]
Length = 683
Score = 108 bits (269), Expect = 1e-21
Identities = 49/86 (56%), Positives = 65/86 (75%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAE+L +L+PDH GYYILLSNM+AEAGRWED R+RE+M RG+KKN YSW
Sbjct: 596 GNIELASWAAEYLFKLKPDHCGYYILLSNMFAEAGRWEDVKRVRELMKSRGLKKNRSYSW 655
Query: 202 VPKQDQMYSFLATKRPG*TKSNCGLS 125
V +D++++F +R S+C L+
Sbjct: 656 VQIRDEVHAFGVGERLERLNSDCLLA 681
>ref|XP_006470514.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Citrus sinensis]
Length = 803
Score = 107 bits (268), Expect = 1e-21
Identities = 46/75 (61%), Positives = 58/75 (77%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG WAAEHL L+P H GYYILLSNMYAEAG+W++A ++RE+M R KKNPG SW
Sbjct: 720 GNVELGAWAAEHLFVLKPQHCGYYILLSNMYAEAGKWDEASKVRELMKSREAKKNPGCSW 779
Query: 202 VPKQDQMYSFLATKR 158
V +D+++ F+ R
Sbjct: 780 VQTRDEVHDFVVNDR 794
>ref|XP_006446349.1| hypothetical protein CICLE_v10018197mg [Citrus clementina]
gi|557548960|gb|ESR59589.1| hypothetical protein
CICLE_v10018197mg [Citrus clementina]
Length = 803
Score = 107 bits (267), Expect = 2e-21
Identities = 46/75 (61%), Positives = 57/75 (76%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG WAAEHL L+P H GYYILLSNMYAEAG+W++A ++RE+M R KKNPG SW
Sbjct: 720 GNVELGAWAAEHLFMLKPQHCGYYILLSNMYAEAGKWDEASKVRELMKSREAKKNPGCSW 779
Query: 202 VPKQDQMYSFLATKR 158
V +D++ F+ R
Sbjct: 780 VQTRDEVQDFVVNDR 794
>ref|XP_003528600.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Glycine max]
Length = 813
Score = 107 bits (267), Expect = 2e-21
Identities = 46/75 (61%), Positives = 60/75 (80%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+ELG WAAEHL +L+P H GYYILLSNMYAEA RW++A+++RE+M RG KKNPG SW
Sbjct: 725 GNIELGLWAAEHLFELKPQHCGYYILLSNMYAEAERWDEANKVRELMKSRGAKKNPGCSW 784
Query: 202 VPKQDQMYSFLATKR 158
V D +++FL ++
Sbjct: 785 VQVGDLVHAFLVGEK 799
>emb|CBI35582.3| unnamed protein product [Vitis vinifera]
Length = 638
Score = 107 bits (266), Expect = 2e-21
Identities = 46/75 (61%), Positives = 61/75 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAEHL +L+P+HSGYY LLSNMYAE GRW++A+RIRE+M RGVKK+PG SW
Sbjct: 526 GNLELAAWAAEHLFELKPEHSGYYTLLSNMYAETGRWDEANRIRELMKSRGVKKSPGCSW 585
Query: 202 VPKQDQMYSFLATKR 158
V +Q ++F+ ++
Sbjct: 586 VQIGEQAHAFVVGEK 600
>ref|XP_004169216.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 684
Score = 106 bits (265), Expect = 3e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG AAEHL +L+P H GYYILLSN+YAE GRW++A++IRE+M RG KKNPG SW
Sbjct: 596 GNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSW 655
Query: 202 VPKQDQMYSFLATKR 158
V DQ+++F+A +R
Sbjct: 656 VQIYDQVHAFVAEER 670
>ref|XP_004140275.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
chloroplastic-like [Cucumis sativus]
Length = 833
Score = 106 bits (265), Expect = 3e-21
Identities = 48/75 (64%), Positives = 61/75 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG AAEHL +L+P H GYYILLSN+YAE GRW++A++IRE+M RG KKNPG SW
Sbjct: 745 GNVELGRRAAEHLFELKPQHCGYYILLSNIYAETGRWDEANKIRELMKSRGAKKNPGCSW 804
Query: 202 VPKQDQMYSFLATKR 158
V DQ+++F+A +R
Sbjct: 805 VQIYDQVHAFVAEER 819
>ref|XP_004513219.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g03580-like [Cicer arietinum]
Length = 810
Score = 106 bits (264), Expect = 4e-21
Identities = 47/71 (66%), Positives = 58/71 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG WAAEHL +L+P H GYYILLSNMYAEA RW++A+ +RE+M +G KKNPG SW
Sbjct: 722 GNVELGHWAAEHLFKLKPHHCGYYILLSNMYAEAERWDEANSVRELMKTKGAKKNPGCSW 781
Query: 202 VPKQDQMYSFL 170
V DQ+++FL
Sbjct: 782 VQIGDQVHAFL 792
>gb|EMJ09476.1| hypothetical protein PRUPE_ppa015109mg [Prunus persica]
Length = 525
Score = 106 bits (264), Expect = 4e-21
Identities = 46/70 (65%), Positives = 57/70 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVEL WAA+HL +L P+H GYYILLSNMYAEAGRW++ +R+RE+M RGVKKN SW
Sbjct: 438 GNVELASWAADHLFRLNPEHCGYYILLSNMYAEAGRWDEVNRVRELMKSRGVKKNRACSW 497
Query: 202 VPKQDQMYSF 173
V QDQ+++F
Sbjct: 498 VQVQDQVHAF 507
>gb|ESW18147.1| hypothetical protein PHAVU_006G016700g [Phaseolus vulgaris]
Length = 821
Score = 104 bits (260), Expect = 1e-20
Identities = 47/75 (62%), Positives = 60/75 (80%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+ELG AAEHL +L+P H GYYILLSNMYAEA RWE+A+++RE+M RG KKNPG SW
Sbjct: 733 GNIELGNLAAEHLFKLKPQHCGYYILLSNMYAEAERWEEANKVRELMRSRGAKKNPGCSW 792
Query: 202 VPKQDQMYSFLATKR 158
V DQ+++FL ++
Sbjct: 793 VQIGDQVHAFLVGEK 807
>gb|EXB63374.1| hypothetical protein L484_002623 [Morus notabilis]
Length = 819
Score = 102 bits (255), Expect = 4e-20
Identities = 47/75 (62%), Positives = 58/75 (77%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GNVELG WAAE+L +L+P HSGYYILLSNMY EAGRW++A+ IRE+M RGVKK PG SW
Sbjct: 731 GNVELGTWAAENLFRLKPQHSGYYILLSNMYVEAGRWKEANAIRELMKSRGVKKGPGCSW 790
Query: 202 VPKQDQMYSFLATKR 158
V + ++F +R
Sbjct: 791 VQIGNHFHAFANGER 805
>ref|XP_002313273.1| hypothetical protein POPTR_0009s07140g [Populus trichocarpa]
gi|222849681|gb|EEE87228.1| hypothetical protein
POPTR_0009s07140g [Populus trichocarpa]
Length = 680
Score = 102 bits (253), Expect = 7e-20
Identities = 43/75 (57%), Positives = 61/75 (81%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
G +EL WAAEHL +L+P HSGYY +LSNMYAEAG+W++A+++R++M RG KKNPG SW
Sbjct: 593 GYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNPGCSW 652
Query: 202 VPKQDQMYSFLATKR 158
V +Q+++F+A +R
Sbjct: 653 VQIDNQVHAFVAGER 667
>ref|XP_006664469.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like, partial [Oryza brachyantha]
Length = 719
Score = 98.2 bits (243), Expect = 1e-18
Identities = 41/71 (57%), Positives = 56/71 (78%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAEHL +L+P+HSGYY L+ NMYAE GRW +A++IR++M R V+KNP YSW
Sbjct: 645 GNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSW 704
Query: 202 VPKQDQMYSFL 170
V +++ +FL
Sbjct: 705 VQDGNKLQAFL 715
>gb|ABA96976.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
Group]
Length = 780
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/65 (63%), Positives = 52/65 (80%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAEHL +L+P+HSGYY L+ NMYAE GRW +A++IR++M R V+KNP YSW
Sbjct: 704 GNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSW 763
Query: 202 VPKQD 188
V QD
Sbjct: 764 VQDQD 768
>gb|EAZ20147.1| hypothetical protein OsJ_35746 [Oryza sativa Japonica Group]
Length = 601
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/65 (63%), Positives = 52/65 (80%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAEHL +L+P+HSGYY L+ NMYAE GRW +A++IR++M R V+KNP YSW
Sbjct: 525 GNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSW 584
Query: 202 VPKQD 188
V QD
Sbjct: 585 VQDQD 589
>ref|NP_001066509.1| Os12g0256900 [Oryza sativa Japonica Group]
gi|113649016|dbj|BAF29528.1| Os12g0256900 [Oryza sativa
Japonica Group]
Length = 132
Score = 97.8 bits (242), Expect = 1e-18
Identities = 41/65 (63%), Positives = 52/65 (80%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAEHL +L+P+HSGYY L+ NMYAE GRW +A++IR++M R V+KNP YSW
Sbjct: 56 GNIELAQWAAEHLFELKPEHSGYYTLMINMYAETGRWNEANKIRKLMKSRKVQKNPAYSW 115
Query: 202 VPKQD 188
V QD
Sbjct: 116 VQDQD 120
>ref|XP_004963485.1| PREDICTED: pentatricopeptide repeat-containing protein
At1g18485-like [Setaria italica]
Length = 786
Score = 95.5 bits (236), Expect = 7e-18
Identities = 40/71 (56%), Positives = 53/71 (74%)
Frame = -1
Query: 382 GNVELGCWAAEHLLQLEPDHSGYYILLSNMYAEAGRWEDADRIREMMNLRGVKKNPGYSW 203
GN+EL WAAEHL +L+P+HSGYY LL NMYAE G W +A+ I+ +M R V+KNP YSW
Sbjct: 710 GNIELARWAAEHLFELKPEHSGYYTLLMNMYAEVGMWSEANEIKTLMKSRKVQKNPAYSW 769
Query: 202 VPKQDQMYSFL 170
V +++ +FL
Sbjct: 770 VQNDNKLQAFL 780