BLASTX nr result

ID: Catharanthus23_contig00029435 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029435
         (274 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group...    83   5e-23
gb|AAL31093.1|AC091749_22 putative retrotransposon-related prote...    84   2e-22
gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subc...    82   2e-22
gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medic...    89   2e-21
emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]          87   5e-21
dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Ar...    81   3e-20
gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]       85   5e-20
emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]    74   6e-20
gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]      84   6e-20
emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]          84   6e-20
gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsi...    81   3e-19
emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]    82   3e-19
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop...    79   5e-19
emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana] ...    76   9e-19
emb|CAN64237.1| hypothetical protein VITISV_042666 [Vitis vinifera]    78   9e-19
gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]          83   1e-18
emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]    79   3e-18
dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]            78   4e-18
sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol poly...    82   5e-18
emb|CAN71749.1| hypothetical protein VITISV_029582 [Vitis vinifera]    79   6e-18

>gb|AAR87163.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53370655|gb|AAU89150.1| integrase core domain
            containing protein [Oryza sativa Japonica Group]
            gi|108710286|gb|ABF98081.1| retrotransposon protein,
            putative, Ty1-copia subclass [Oryza sativa Japonica
            Group]
          Length = 1322

 Score = 83.2 bits (204), Expect(2) = 5e-23
 Identities = 38/61 (62%), Positives = 48/61 (78%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K FSQ+ G+D+N +FS VVK+ +IR   ++V  +DL+LEQLDVKT FLHGELEE IYM Q
Sbjct: 877  KGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVTMHDLELEQLDVKTTFLHGELEEEIYMDQ 936

Query: 7    P 5
            P
Sbjct: 937  P 937



 Score = 50.1 bits (118), Expect(2) = 5e-23
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K + CKWIFK KE  S +EPPRFK RLVAKGF
Sbjct: 848 KPVRCKWIFKRKEGLSPSEPPRFKVRLVAKGF 879


>gb|AAL31093.1|AC091749_22 putative retrotransposon-related protein [Oryza sativa Japonica
            Group] gi|22655747|gb|AAN04164.1| Putative
            retrotransposon protein [Oryza sativa Japonica Group]
            gi|31431214|gb|AAP53029.1| retrotransposon protein,
            putative, Ty1-copia subclass, expressed [Oryza sativa
            Japonica Group]
          Length = 1229

 Score = 84.0 bits (206), Expect(2) = 2e-22
 Identities = 39/61 (63%), Positives = 48/61 (78%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K FSQ+ G+D+N +FS VVK+ +IR    +VA +DL+LEQLDVKT FLHGELEE IYM Q
Sbjct: 823  KGFSQIAGVDYNDVFSPVVKHSSIRTFFCIVAMHDLELEQLDVKTIFLHGELEEEIYMDQ 882

Query: 7    P 5
            P
Sbjct: 883  P 883



 Score = 47.4 bits (111), Expect(2) = 2e-22
 Identities = 22/32 (68%), Positives = 24/32 (75%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K + CKWIFK KE  S + PPRF ARLVAKGF
Sbjct: 794 KPVHCKWIFKRKEGLSPSGPPRFNARLVAKGF 825


>gb|ABA96718.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1131

 Score = 82.0 bits (201), Expect(2) = 2e-22
 Identities = 38/61 (62%), Positives = 48/61 (78%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K FSQ+ G+D+N +FS VVK+ +IR   ++VA +DL+LEQLDVKT FLHGELE  IYM Q
Sbjct: 768 KGFSQIAGVDYNDVFSPVVKHSSIRTFFSIVAMHDLELEQLDVKTTFLHGELEVEIYMDQ 827

Query: 7   P 5
           P
Sbjct: 828 P 828



 Score = 49.3 bits (116), Expect(2) = 2e-22
 Identities = 23/32 (71%), Positives = 25/32 (78%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K + CKWIFK KE  S +EPPRFKA LVAKGF
Sbjct: 739 KPVRCKWIFKRKEGLSPSEPPRFKATLVAKGF 770


>gb|ABD32732.1| hypothetical protein MtrDRAFT_AC150777g7v1 [Medicago truncatula]
          Length = 624

 Score = 89.4 bits (220), Expect(2) = 2e-21
 Identities = 43/60 (71%), Positives = 52/60 (86%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K F+Q EGIDFN+IFS VV++ +IR++LA VA +DL+LEQLDVKTAFLHGELEE IYM Q
Sbjct: 236 KGFNQKEGIDFNEIFSPVVRHTSIRVLLAFVALFDLELEQLDVKTAFLHGELEEEIYMEQ 295



 Score = 38.5 bits (88), Expect(2) = 2e-21
 Identities = 18/29 (62%), Positives = 20/29 (68%)
 Frame = -2

Query: 261 CKWIFKIKEPESSNEPPRFKARLVAKGFH 175
           CKWI+K KE     E PR KARLV KGF+
Sbjct: 211 CKWIYKKKEGIPGVENPRCKARLVVKGFN 239


>emb|CAD40121.3| OSJNBa0061C06.5 [Oryza sativa Japonica Group]
          Length = 621

 Score = 87.0 bits (214), Expect(2) = 5e-21
 Identities = 40/61 (65%), Positives = 51/61 (83%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K +SQ+ GIDFN +FS VVK+ +IR +L++VA +D +LEQ+DVKTAFLHGELEE IYM Q
Sbjct: 273 KGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQ 332

Query: 7   P 5
           P
Sbjct: 333 P 333



 Score = 39.7 bits (91), Expect(2) = 5e-21
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K I CKWIFK KE  S ++   +KARLVAKG+
Sbjct: 244 KPIRCKWIFKRKECISPSDEAMYKARLVAKGY 275


>dbj|BAB02145.1| copia-like retroelement pol polyprotein-like [Arabidopsis thaliana]
          Length = 348

 Score = 81.3 bits (199), Expect(2) = 3e-20
 Identities = 39/61 (63%), Positives = 50/61 (81%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K FSQ EGID+N++FSLVVK+ +IR++L+LV   D +LEQ+DVKT+FLHG LEE I M Q
Sbjct: 276 KGFSQQEGIDYNEVFSLVVKHVSIRLMLSLVVNMDYELEQMDVKTSFLHGNLEERILMSQ 335

Query: 7   P 5
           P
Sbjct: 336 P 336



 Score = 42.7 bits (99), Expect(2) = 3e-20
 Identities = 20/32 (62%), Positives = 22/32 (68%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           KLI CKWIFK+K      E  R+K RLVAKGF
Sbjct: 247 KLIGCKWIFKLKPGIPGLEKQRYKVRLVAKGF 278


>gb|AER13172.1| putative gag/pol polyprotein [Phaseolus vulgaris]
          Length = 1556

 Score = 84.7 bits (208), Expect(2) = 5e-20
 Identities = 41/61 (67%), Positives = 51/61 (83%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K F Q +GIDFN+IFS VVK  +IRI+L+L A  DL++EQ+DVKTAFLHG+LEE IYM+Q
Sbjct: 825  KGFRQRKGIDFNEIFSPVVKMSSIRIVLSLAATLDLEVEQMDVKTAFLHGDLEEEIYMKQ 884

Query: 7    P 5
            P
Sbjct: 885  P 885



 Score = 38.5 bits (88), Expect(2) = 5e-20
 Identities = 16/32 (50%), Positives = 26/32 (81%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K ++ +WI+++K+ ES++  PR+KARLV KGF
Sbjct: 797 KALENRWIYRVKQ-ESNSTSPRYKARLVVKGF 827


>emb|CAN61272.1| hypothetical protein VITISV_039063 [Vitis vinifera]
          Length = 1643

 Score = 73.9 bits (180), Expect(2) = 6e-20
 Identities = 33/49 (67%), Positives = 45/49 (91%)
 Frame = -1

Query: 151  KIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQP 5
            K+FS VVK+K+IR++LA+V+ ++L+L+QLDVKTAFLHG LEE IYM+QP
Sbjct: 1198 KVFSPVVKHKSIRVLLAMVSVFNLELDQLDVKTAFLHGNLEEEIYMKQP 1246



 Score = 48.9 bits (115), Expect(2) = 6e-20
 Identities = 20/32 (62%), Positives = 27/32 (84%)
 Frame = -2

Query: 273  KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
            K +DCKW+FKIK+  S +EPP++K+RLVAK F
Sbjct: 1169 KPVDCKWLFKIKDGISEDEPPKYKSRLVAKVF 1200


>gb|ACS74199.1| putative gag-pol polyprotein [Fragaria x ananassa]
          Length = 1297

 Score = 84.0 bits (206), Expect(2) = 6e-20
 Identities = 37/61 (60%), Positives = 53/61 (86%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K +SQ EG+D+++IFS VVK+ +IR++L++ A YD+++EQ+DVKTAFLHG+LEE IYM Q
Sbjct: 853  KGYSQKEGVDYDEIFSPVVKHTSIRLLLSIAAQYDMEIEQMDVKTAFLHGDLEEDIYMSQ 912

Query: 7    P 5
            P
Sbjct: 913  P 913



 Score = 38.9 bits (89), Expect(2) = 6e-20
 Identities = 16/32 (50%), Positives = 23/32 (71%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           KL+ CKW+F+ KE    ++   +KARLVAKG+
Sbjct: 824 KLVGCKWVFRKKEGIHEDDAITYKARLVAKGY 855


>emb|CAI44659.1| OSJNBa0061C06.9 [Oryza sativa Japonica Group]
          Length = 1007

 Score = 84.3 bits (207), Expect(2) = 6e-20
 Identities = 39/60 (65%), Positives = 50/60 (83%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K +SQ+ GIDFN +FS VVK+ +IR +L++VA +D +LEQ+DVKTAFLHGELEE IYM Q
Sbjct: 669 KGYSQIPGIDFNDVFSPVVKHSSIRTLLSIVAMHDYELEQMDVKTAFLHGELEEDIYMEQ 728



 Score = 38.5 bits (88), Expect(2) = 6e-20
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K I CKWIFK K+  S ++   +KARLVAKG+
Sbjct: 640 KPIRCKWIFKRKKGISPSDEAMYKARLVAKGY 671


>gb|AAD19773.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1335

 Score = 80.9 bits (198), Expect(2) = 3e-19
 Identities = 37/61 (60%), Positives = 51/61 (83%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K F+Q EG+D+N+IFS VVK+ +IR +L++V  Y+++L+Q+DVKTAFLHG LEE IYM Q
Sbjct: 887  KGFTQKEGVDYNEIFSPVVKHVSIRYLLSMVVHYNMELQQMDVKTAFLHGFLEEEIYMAQ 946

Query: 7    P 5
            P
Sbjct: 947  P 947



 Score = 39.7 bits (91), Expect(2) = 3e-19
 Identities = 19/32 (59%), Positives = 21/32 (65%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           KLI C+W+F  K      E PRF ARLVAKGF
Sbjct: 858 KLIGCRWVFTRKAGIPGVEAPRFIARLVAKGF 889


>emb|CAN83951.1| hypothetical protein VITISV_043907 [Vitis vinifera]
          Length = 745

 Score = 82.4 bits (202), Expect(2) = 3e-19
 Identities = 39/61 (63%), Positives = 51/61 (83%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K F+Q EGID+ + FSLV K  ++RIILALVA +DL+L+Q+DVKT FL+GELEE +YM+Q
Sbjct: 255 KGFTQKEGIDYTETFSLVSKKDSLRIILALVAHFDLELQQMDVKTTFLNGELEEEVYMKQ 314

Query: 7   P 5
           P
Sbjct: 315 P 315



 Score = 38.1 bits (87), Expect(2) = 3e-19
 Identities = 18/32 (56%), Positives = 23/32 (71%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K I CKW+FK K+ +S +   R+K RLVAKGF
Sbjct: 227 KTIGCKWVFKTKK-DSLDNIERYKVRLVAKGF 257


>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
          Length = 1137

 Score = 79.0 bits (193), Expect(2) = 5e-19
 Identities = 36/61 (59%), Positives = 51/61 (83%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K +SQ EGID+ +IFS VVK+ +IR++L++V   D++L+Q+DVKTAFLHG L+ETIY+ Q
Sbjct: 705 KGYSQKEGIDYQEIFSPVVKHVSIRLLLSMVTHCDMELQQMDVKTAFLHGYLDETIYIEQ 764

Query: 7   P 5
           P
Sbjct: 765 P 765



 Score = 40.8 bits (94), Expect(2) = 5e-19
 Identities = 19/32 (59%), Positives = 21/32 (65%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K I CKW+FK K      E PRFKARLV KG+
Sbjct: 676 KPIGCKWVFKRKSGIVGVEKPRFKARLVVKGY 707


>emb|CAB40039.1| putative retrotransposon [Arabidopsis thaliana]
           gi|7267743|emb|CAB78169.1| putative retrotransposon
           [Arabidopsis thaliana]
          Length = 1230

 Score = 76.3 bits (186), Expect(2) = 9e-19
 Identities = 38/61 (62%), Positives = 49/61 (80%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K ++Q EGID+  IFS VVK+ +IRI+LA+VA  + +LEQLDVKTAFLHG+LEE I+M  
Sbjct: 808 KGYAQREGIDYTDIFSPVVKHVSIRILLAIVAEENYELEQLDVKTAFLHGDLEEKIFMEA 867

Query: 7   P 5
           P
Sbjct: 868 P 868



 Score = 42.7 bits (99), Expect(2) = 9e-19
 Identities = 19/32 (59%), Positives = 23/32 (71%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           ++I CKWIFK K      E PRFKARLV+KG+
Sbjct: 779 RVIGCKWIFKRKPGTPGIEQPRFKARLVSKGY 810


>emb|CAN64237.1| hypothetical protein VITISV_042666 [Vitis vinifera]
          Length = 162

 Score = 78.2 bits (191), Expect(2) = 9e-19
 Identities = 38/61 (62%), Positives = 50/61 (81%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K F+Q EGID+ + FS V K  ++RIILALVA +DL+L+Q+DVKTA L+GELEE +YM+Q
Sbjct: 52  KGFNQKEGIDYTETFSPVSKKDSLRIILALVAHFDLELQQMDVKTASLNGELEEEVYMKQ 111

Query: 7   P 5
           P
Sbjct: 112 P 112



 Score = 40.8 bits (94), Expect(2) = 9e-19
 Identities = 19/33 (57%), Positives = 24/33 (72%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGFH 175
           K I CKW+FK K+ +SS    R+K RLVAKGF+
Sbjct: 24  KTIGCKWVFKTKK-DSSGNVERYKVRLVAKGFN 55


>gb|AAV88069.1| hypothetical retrotransposon [Ipomoea batatas]
          Length = 1415

 Score = 83.2 bits (204), Expect(2) = 1e-18
 Identities = 38/61 (62%), Positives = 51/61 (83%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K FSQ +GIDF++IFS VVK+ +IR++L L A  D+++EQ+DVKTAFLHG+L+E IYM Q
Sbjct: 879  KGFSQKKGIDFDEIFSPVVKFSSIRVVLGLAARLDIEIEQMDVKTAFLHGDLDEEIYMEQ 938

Query: 7    P 5
            P
Sbjct: 939  P 939



 Score = 35.4 bits (80), Expect(2) = 1e-18
 Identities = 15/32 (46%), Positives = 23/32 (71%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K +  +W++++K  E ++ P RFKARLV KGF
Sbjct: 851 KALKNRWVYRVKHEEGTSVP-RFKARLVVKGF 881


>emb|CAN80304.1| hypothetical protein VITISV_017821 [Vitis vinifera]
          Length = 939

 Score = 79.3 bits (194), Expect(2) = 3e-18
 Identities = 36/61 (59%), Positives = 52/61 (85%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K ++Q EG+DFN+IFS +VK+ +IR++LALV+ ++L+L Q+DV  AFLHGELEE I+M+Q
Sbjct: 529 KAYTQREGMDFNEIFSPMVKHTSIRVLLALVSLWNLELXQMDVNRAFLHGELEEEIFMQQ 588

Query: 7   P 5
           P
Sbjct: 589 P 589



 Score = 37.7 bits (86), Expect(2) = 3e-18
 Identities = 17/32 (53%), Positives = 21/32 (65%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K++ CKW+FK K      EP RFKA LVAK +
Sbjct: 500 KVVGCKWVFKKKLGIPHVEPERFKATLVAKAY 531


>dbj|BAA11674.1| unnamed protein product [Nicotiana tabacum]
          Length = 1338

 Score = 78.2 bits (191), Expect(2) = 4e-18
 Identities = 38/61 (62%), Positives = 49/61 (80%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K F+Q +GIDF++IFS VVK  +IR +L L A  +L++EQ+DVKTAFLHG+LEE IYM Q
Sbjct: 882  KGFNQRKGIDFDEIFSPVVKMTSIRTVLGLAASLNLEVEQMDVKTAFLHGDLEEEIYMEQ 941

Query: 7    P 5
            P
Sbjct: 942  P 942



 Score = 38.5 bits (88), Expect(2) = 4e-18
 Identities = 18/28 (64%), Positives = 21/28 (75%)
 Frame = -2

Query: 258 KWIFKIKEPESSNEPPRFKARLVAKGFH 175
           KW+FK+K  E  N  PRFKARLV KGF+
Sbjct: 859 KWVFKMKHDEH-NSLPRFKARLVVKGFN 885


>sp|P10978.1|POLX_TOBAC RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT
            1-94; Includes: RecName: Full=Protease; Includes:
            RecName: Full=Reverse transcriptase; Includes: RecName:
            Full=Endonuclease gi|20045|emb|CAA32025.1| unnamed
            protein product [Nicotiana tabacum]
          Length = 1328

 Score = 81.6 bits (200), Expect(2) = 5e-18
 Identities = 41/61 (67%), Positives = 49/61 (80%)
 Frame = -1

Query: 187  KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
            K F Q +GIDF++IFS VVK  +IR IL+L A  DL++EQLDVKTAFLHG+LEE IYM Q
Sbjct: 881  KGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEEEIYMEQ 940

Query: 7    P 5
            P
Sbjct: 941  P 941



 Score = 34.7 bits (78), Expect(2) = 5e-18
 Identities = 15/30 (50%), Positives = 22/30 (73%)
 Frame = -2

Query: 267 IDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           + CKW+FK+K+ +   +  R+KARLV KGF
Sbjct: 855 LKCKWVFKLKK-DGDCKLVRYKARLVVKGF 883


>emb|CAN71749.1| hypothetical protein VITISV_029582 [Vitis vinifera]
          Length = 162

 Score = 79.0 bits (193), Expect(2) = 6e-18
 Identities = 37/61 (60%), Positives = 50/61 (81%)
 Frame = -1

Query: 187 KRFSQVEGIDFNKIFSLVVKYKTIRIILALVAFYDLDLEQLDVKTAFLHGELEETIYMRQ 8
           K F+Q EGID+ + FS V K  ++RIILA+VA +DL+L+Q+DVKT FL+GELEE +YM+Q
Sbjct: 52  KGFTQKEGIDYTETFSPVSKKDSLRIILAIVAHFDLELQQMDVKTTFLNGELEEEVYMKQ 111

Query: 7   P 5
           P
Sbjct: 112 P 112



 Score = 37.4 bits (85), Expect(2) = 6e-18
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = -2

Query: 273 KLIDCKWIFKIKEPESSNEPPRFKARLVAKGF 178
           K I CKW+FK K+ +S     R+K RL+AKGF
Sbjct: 24  KTIGCKWVFKTKK-DSLGNIERYKTRLIAKGF 54


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