BLASTX nr result
ID: Catharanthus23_contig00029385
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00029385
(942 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002531375.1| RNA and export factor binding protein, putat... 131 4e-28
ref|XP_002284215.1| PREDICTED: RNA and export factor-binding pro... 131 4e-28
ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citr... 129 2e-27
ref|XP_004149042.1| PREDICTED: RNA and export factor-binding pro... 128 3e-27
ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isofor... 126 1e-26
ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and expo... 125 2e-26
gb|EOY34109.1| RNA-binding family protein [Theobroma cacao] 124 4e-26
gb|EOY07572.1| RNA-binding family protein [Theobroma cacao] 124 7e-26
ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isof... 124 7e-26
gb|EOY18206.1| RNA-binding family protein, putative isoform 2 [T... 122 2e-25
ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Popu... 121 3e-25
emb|CAG26903.1| ALY protein [Nicotiana benthamiana] 121 4e-25
ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Popu... 120 7e-25
ref|XP_002332459.1| predicted protein [Populus trichocarpa] 120 7e-25
ref|XP_004143092.1| PREDICTED: RNA and export factor-binding pro... 120 1e-24
ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [A... 119 1e-24
gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus no... 119 2e-24
gb|ESW04085.1| hypothetical protein PHAVU_011G066000g [Phaseolus... 119 2e-24
ref|XP_003579071.1| PREDICTED: RNA and export factor-binding pro... 119 2e-24
ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isofor... 119 2e-24
>ref|XP_002531375.1| RNA and export factor binding protein, putative [Ricinus communis]
gi|223529035|gb|EEF31023.1| RNA and export factor
binding protein, putative [Ricinus communis]
Length = 247
Score = 131 bits (329), Expect = 4e-28
Identities = 87/209 (41%), Positives = 120/209 (57%), Gaps = 30/209 (14%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTP----ATYQ--------GIHMREMEMVGGMKNEN--EGTMLHVSNL 362
F+ RG++R PY +T+Q G+ M + + GG + GT L++SNL
Sbjct: 39 FNNRGTNRAAPYAAAKAPESTWQHDMFTDQGGMGMFQGQGGGGSRASGIETGTKLYISNL 98
Query: 363 NLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDG 542
V++EDIK LFS+VGDLK YSIHYD SGR KG A+VV+ R +DALAA++RYNN LDG
Sbjct: 99 EYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRTDALAAVKRYNNVQLDG 158
Query: 543 NRLTLVLSNSDVVTSAIPPASHG---------------VETQRWAYG-SYWQHGLVQVQG 674
+ + + +++ T A PA++G T R G S G + +G
Sbjct: 159 KPMKIEIVGTNIATPAATPAANGNFGNSNGAPRGGQGRGGTMRRPRGASSDGRGFGRGRG 218
Query: 675 RGKKRGHQPKEVSAEALDADLEKYREQAM 761
RG+ RG ++VSAE LDADLEKY +AM
Sbjct: 219 RGRGRG---EKVSAEDLDADLEKYHSEAM 244
>ref|XP_002284215.1| PREDICTED: RNA and export factor-binding protein 2 [Vitis vinifera]
gi|297746115|emb|CBI16171.3| unnamed protein product
[Vitis vinifera]
Length = 243
Score = 131 bits (329), Expect = 4e-28
Identities = 80/201 (39%), Positives = 114/201 (56%), Gaps = 25/201 (12%)
Frame = +3
Query: 234 RGSSRMMPYTTPATYQGIHMREM---------EMVGGMKNENEGTMLHVSNLNLNVTHED 386
RG++R+ PY+ + +M G GT L++SNL+ V++ED
Sbjct: 43 RGANRITPYSVSKAPETTWQHDMFADQAAAYPAQAGRTSAIETGTKLYISNLDYGVSNED 102
Query: 387 IKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTLVLS 566
IK LFS+VGDLK YSIHYD SGR KG A+VV+ R DA+AA++RYNN LDG + + +
Sbjct: 103 IKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRGDAVAAVKRYNNVQLDGKPMKIEIV 162
Query: 567 NSDVVT-SAIPPASHG---------------VETQRWAYGSYWQHGLVQVQGRGKKRGHQ 698
+++ T +A+PP ++G V +Q G G + +GRG+ RG
Sbjct: 163 GTNIATPAAVPPVTNGTFGNSNGGLRSAQGRVGSQGRPRGGSGGRGFGRGRGRGRGRG-- 220
Query: 699 PKEVSAEALDADLEKYREQAM 761
++VSAE LDADLEKY +AM
Sbjct: 221 -EKVSAEDLDADLEKYHSEAM 240
>ref|XP_006424776.1| hypothetical protein CICLE_v10029160mg [Citrus clementina]
gi|567864256|ref|XP_006424777.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864258|ref|XP_006424778.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|567864260|ref|XP_006424779.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526710|gb|ESR38016.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526711|gb|ESR38017.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526712|gb|ESR38018.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
gi|557526713|gb|ESR38019.1| hypothetical protein
CICLE_v10029160mg [Citrus clementina]
Length = 247
Score = 129 bits (323), Expect = 2e-27
Identities = 80/199 (40%), Positives = 112/199 (56%), Gaps = 24/199 (12%)
Frame = +3
Query: 234 RGSSRMMPYTTPATYQGIHMREM----------EMVGGMKNENEGTMLHVSNLNLNVTHE 383
RG++R+ PYTT + +M + G GT L++SNL+ V++E
Sbjct: 42 RGANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNE 101
Query: 384 DIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTLVL 563
DIK LFS+VGDLK YSIHYD SGR KG A+VVY R +DA+AA++RYNN LDG + + +
Sbjct: 102 DIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNNVQLDGKPMKIEI 161
Query: 564 SNSDVVTSAIPPA-------SHGVETQRWAYGSYWQH------GLVQVQGRGKKRGHQPK 704
+++ T PA S+GV G ++ G + GRG+ RG +
Sbjct: 162 VGTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERN 221
Query: 705 E-VSAEALDADLEKYREQA 758
E +SAE LDADL+KY +A
Sbjct: 222 EKISAEDLDADLDKYYSEA 240
>ref|XP_004149042.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 128 bits (322), Expect = 3e-27
Identities = 83/200 (41%), Positives = 112/200 (56%), Gaps = 21/200 (10%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTPATYQGIHMREMEMVGGMKNENE---------GTMLHVSNLNLNVT 377
F RG +R PY+T + +M + G + GT L+VSNL+ V+
Sbjct: 40 FRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVS 99
Query: 378 HEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTL 557
+EDIK LFS+VGD+K YSI+YD SGR KG A++V+ R +DALAAI+RYNN LDG + L
Sbjct: 100 NEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIVFSRQADALAAIKRYNNVQLDGKPMKL 159
Query: 558 VLSNSDVVTSAIPPASH------------GVETQRWAYGSYWQHGLVQVQGRGKKRGHQP 701
+ +++VT A+P S+ G R G + G G G RGH
Sbjct: 160 EIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRSG----SGSGSGRGHGE 215
Query: 702 KEVSAEALDADLEKYREQAM 761
K +SAE LDADL+KY E+AM
Sbjct: 216 K-LSAEDLDADLDKYHEEAM 234
>ref|XP_006488282.1| PREDICTED: THO complex subunit 4-like isoform X1 [Citrus sinensis]
Length = 247
Score = 126 bits (317), Expect = 1e-26
Identities = 79/199 (39%), Positives = 111/199 (55%), Gaps = 24/199 (12%)
Frame = +3
Query: 234 RGSSRMMPYTTPATYQGIHMREM----------EMVGGMKNENEGTMLHVSNLNLNVTHE 383
RG++R+ PYTT + +M + G GT L++SNL+ V++E
Sbjct: 42 RGANRVAPYTTAKAPETTWQHDMFADQVSAFPVQQAGRASAIETGTKLYISNLDYGVSNE 101
Query: 384 DIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTLVL 563
DIK LFS+VGDLK YSIHYD SGR KG A+VVY R +DA+AA++RYN LDG + + +
Sbjct: 102 DIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVYSRRADAVAAVKRYNTVQLDGKPMKIEI 161
Query: 564 SNSDVVTSAIPPA-------SHGVETQRWAYGSYWQH------GLVQVQGRGKKRGHQPK 704
+++ T PA S+GV G ++ G + GRG+ RG +
Sbjct: 162 VGTNIATRTAAPAANVNFGNSNGVPRGGQGRGGAFRRLRGGGGGGGRGFGRGRGRGRERN 221
Query: 705 E-VSAEALDADLEKYREQA 758
E +SAE LDADL+KY +A
Sbjct: 222 EKISAEDLDADLDKYYSEA 240
>ref|XP_004164149.1| PREDICTED: LOW QUALITY PROTEIN: RNA and export factor-binding
protein 2-like [Cucumis sativus]
Length = 248
Score = 125 bits (314), Expect = 2e-26
Identities = 81/206 (39%), Positives = 113/206 (54%), Gaps = 27/206 (13%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTPATYQGIHMREMEMVGGMKNENE---------GTMLHVSNLNLNVT 377
F RG +R PY+T + +M + G + GT L+VSNL+ V+
Sbjct: 40 FRNRGLNRATPYSTSKAPETAWSHDMFVDHGAAYPSHPPRASAIETGTKLYVSNLDYGVS 99
Query: 378 HEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTL 557
+EDIK LFS+VGD+K YSI+YD SGR KG A++ + R +DALAAI+RYNN LDG + L
Sbjct: 100 NEDIKELFSEVGDVKRYSINYDKSGRSKGTAEIXFSRQADALAAIKRYNNVQLDGKPMKL 159
Query: 558 VLSNSDVVTSAIPPAS-------HGVETQRWAYGSYWQHGLVQVQGRGKKRGH------- 695
+ +++VT A+P S +G A G G + GRG+ RG
Sbjct: 160 EIVGTNIVTPAVPAPSNASFGNPNGFPRGGRAMGRNRGGGRGRGPGRGRGRGRGSGSGSG 219
Query: 696 ----QPKEVSAEALDADLEKYREQAM 761
+++SAE LDADL+KY E+AM
Sbjct: 220 SGRGHGEKLSAEDLDADLDKYHEEAM 245
>gb|EOY34109.1| RNA-binding family protein [Theobroma cacao]
Length = 241
Score = 124 bits (312), Expect = 4e-26
Identities = 78/206 (37%), Positives = 112/206 (54%), Gaps = 27/206 (13%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTPATYQGIHMREMEMVGGMKNENE---------GTMLHVSNLNLNVT 377
F RG++R PYT + +M G + + GT L++SNL+ V+
Sbjct: 39 FPNRGANRSGPYTAAKAPETTWQHDMYSDKGAAFQGQAGRASAIETGTKLYISNLDYGVS 98
Query: 378 HEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTL 557
++DIK LF++VGDLK ++IHYD SGR KG A+VV+ R +DA+AA++RYNN LDG + +
Sbjct: 99 NDDIKELFAEVGDLKRFTIHYDRSGRSKGTAEVVFSRRTDAMAAVKRYNNVQLDGKPMKI 158
Query: 558 VLSNSDVVTSAIPPASHGV------------------ETQRWAYGSYWQHGLVQVQGRGK 683
+ ++V T P A +G QR G G + +GRGK
Sbjct: 159 EIVGTNVATPGAPSAGNGAFGNSNGAPRGGHGRGGGFGKQRGGGGG---RGFGRGRGRGK 215
Query: 684 KRGHQPKEVSAEALDADLEKYREQAM 761
RG ++VSAE LDA+LEKY +AM
Sbjct: 216 GRG---EKVSAEDLDAELEKYHSEAM 238
>gb|EOY07572.1| RNA-binding family protein [Theobroma cacao]
Length = 240
Score = 124 bits (310), Expect = 7e-26
Identities = 79/202 (39%), Positives = 111/202 (54%), Gaps = 23/202 (11%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTPATYQGIHMREMEMV----------GGMKNENEGTMLHVSNLNLNV 374
F R ++R PY+ P + V G + GT L++SNL+ V
Sbjct: 38 FPNRAANRTAPYSKPVQAPDTTWQHDMFVDDGAGFPSAAGRASSIETGTKLYISNLDYGV 97
Query: 375 THEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLT 554
++EDIK LFS+VGD+K YS+HYD SGR KG A+VV+ R +DA A +RYN LDG +
Sbjct: 98 SNEDIKELFSEVGDMKRYSVHYDRSGRSKGTAEVVFSRRTDAAVAFKRYNGVQLDGKPMK 157
Query: 555 LVLSNSDVVTS-AIPPAS-------HGVETQRWAYGSYWQHGLVQVQGRGKKRGH----- 695
+ + ++V T A+PPA+ +GV GS+ G + GRG +RG
Sbjct: 158 IEIVGTNVATPVALPPATNGKFANPNGVPRSGQGRGSF--SGRSRGPGRGARRGRGQGRG 215
Query: 696 QPKEVSAEALDADLEKYREQAM 761
Q ++VSAE LDADLE Y ++AM
Sbjct: 216 QGEKVSAEDLDADLENYHKEAM 237
>ref|XP_003543506.1| PREDICTED: aly/REF export factor 2-like isoform X1 [Glycine max]
Length = 243
Score = 124 bits (310), Expect = 7e-26
Identities = 71/166 (42%), Positives = 106/166 (63%), Gaps = 16/166 (9%)
Frame = +3
Query: 312 GGMKNENE-GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYER 488
GG + E GT L++SNL+ V+++DIK LF +VGD+K +++HYD SGR KG A+VV+ R
Sbjct: 76 GGRASSIETGTKLYISNLDYGVSNDDIKELFLEVGDVKRHTVHYDRSGRSKGTAEVVFSR 135
Query: 489 HSDALAAIRRYNNRLLDGNRLTLVLSNSDVVTSAIPPASHGV--------ETQRWAYGSY 644
+DA+AA++RYNN LDG + + + +++ T A PPA +G + + GS
Sbjct: 136 RADAVAAVKRYNNVQLDGKPMKVEIVGTNIATHAAPPAVNGTFGNPTGVPRSGQGRSGSL 195
Query: 645 WQ-------HGLVQVQGRGKKRGHQPKEVSAEALDADLEKYREQAM 761
+ G +Q +GRG+ RG + ++VSAE LDADLEKY +AM
Sbjct: 196 GRPRGGSRGRGSIQ-RGRGRGRGGRDEKVSAEDLDADLEKYHAEAM 240
>gb|EOY18206.1| RNA-binding family protein, putative isoform 2 [Theobroma cacao]
Length = 242
Score = 122 bits (306), Expect = 2e-25
Identities = 82/188 (43%), Positives = 110/188 (58%), Gaps = 20/188 (10%)
Frame = +3
Query: 255 PYTTPATYQGIHMREMEMVGGMKNENEGTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSI 434
P T A + G ++ GG E + L +SNL+ V++ED+KVLFS+VGDLK YSI
Sbjct: 58 PVPTAAAWHG----QLVSSGGSDMEAK---LCISNLDYGVSNEDVKVLFSEVGDLKRYSI 110
Query: 435 HYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNRLTLVLSNSDVVTSA-IPPASHG 611
+YD SGR KG A+VV+ R +DALAAI+RYNN LDG +T+ L ++VV SA IPP +
Sbjct: 111 NYDRSGRSKGTAEVVFYRQTDALAAIKRYNNVQLDGKPMTIELVGANVVMSAPIPPTNSS 170
Query: 612 V---------ETQRWAYGSYWQHGLVQ-----VQGRG-----KKRGHQPKEVSAEALDAD 734
+ Q GS W HG GRG ++ GH +++SAE LDAD
Sbjct: 171 IVRNPNVAFRRDQEKVGGSRWVHGGGNGPNGGGAGRGFARRRRQGGHVGQKLSAEDLDAD 230
Query: 735 LEKYREQA 758
L+KY +A
Sbjct: 231 LDKYHLEA 238
>ref|XP_006373955.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321275|gb|ERP51752.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 244
Score = 121 bits (304), Expect = 3e-25
Identities = 75/206 (36%), Positives = 114/206 (55%), Gaps = 28/206 (13%)
Frame = +3
Query: 228 SKRGSSRMMPYTTPATYQGIHMREMEMVGGMKNENE---------------GTMLHVSNL 362
S+R S+R TTP + + E M +N GT L++SNL
Sbjct: 36 SRRFSNRAGNITTPYSKPQVQAPETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNL 95
Query: 363 NLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDG 542
+ V+ EDIK LFS++GDLK YS+HYD SGR +G A++V+ R DA++A++RYNN LDG
Sbjct: 96 DFGVSTEDIKELFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDG 155
Query: 543 NRLTLVLSNSDVVT-SAIPPASHG------VETQRWAYGSYWQHGLVQVQGRGKKRGHQP 701
+ + + +++ T A+PP+++G + R + G G + G G +RG +
Sbjct: 156 KPMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGGHGVRRGGRG 215
Query: 702 K------EVSAEALDADLEKYREQAM 761
+ ++SAE LDADLEKY +AM
Sbjct: 216 RGRGRGEKISAEDLDADLEKYHSEAM 241
>emb|CAG26903.1| ALY protein [Nicotiana benthamiana]
Length = 252
Score = 121 bits (303), Expect = 4e-25
Identities = 77/208 (37%), Positives = 112/208 (53%), Gaps = 29/208 (13%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTPATYQGIHMREM----------EMVGG---MKNENEGTMLHVSNLN 365
F R ++R PY+T + +M GG + + GT L++SNL+
Sbjct: 42 FPNRSANRAAPYSTAKAPEAAWNHDMFAAADQAFPFGQAGGDQAASSISTGTKLYISNLD 101
Query: 366 LNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGN 545
V++EDIK LFS+ GDLK Y+IHYD SGR KG A+VV+ R DALAA++RYNN LDG
Sbjct: 102 YGVSNEDIKELFSEAGDLKRYAIHYDRSGRSKGTAEVVFSRRQDALAAVKRYNNVQLDGK 161
Query: 546 RLTLVLSNSDVVTSAIP---------PASHGVETQRWAYGSYWQHGLVQVQG-------R 677
+ + + +++ T A P + G T + G + + + +G R
Sbjct: 162 PMKIEIVGTNIATPAAPAFNGAFGFGDTNGGPRTDQARSGGFGRSRGGRGRGRGFRGGSR 221
Query: 678 GKKRGHQPKEVSAEALDADLEKYREQAM 761
G+ RG + ++VSAE LDADL KY +AM
Sbjct: 222 GRGRGDRGEKVSAEDLDADLMKYHTEAM 249
>ref|XP_006373956.1| hypothetical protein POPTR_0016s11470g [Populus trichocarpa]
gi|550321276|gb|ERP51753.1| hypothetical protein
POPTR_0016s11470g [Populus trichocarpa]
Length = 245
Score = 120 bits (301), Expect = 7e-25
Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 31/209 (14%)
Frame = +3
Query: 228 SKRGSSRMMPYTTPATYQGIHMREMEMVGGMKNENE---------------GTMLHVSNL 362
S+R S+R TTP + + E M +N GT L++SNL
Sbjct: 36 SRRFSNRAGNITTPYSKPQVQAPETSWQHDMFTDNPVSASAYPARASSIETGTKLYISNL 95
Query: 363 NLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDG 542
+ V+ EDIK LFS++GDLK YS+HYD SGR +G A++V+ R DA++A++RYNN LDG
Sbjct: 96 DFGVSTEDIKELFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDAVSAVKRYNNVQLDG 155
Query: 543 NRLTLVLSNSDVVT-SAIPPASHGV----------ETQRWAYGSYWQ-----HGLVQVQG 674
+ + + +++ T A+PP+++G+ + + G+ + HG V+ G
Sbjct: 156 KPMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSSQGRGGTTGRPRGGGHG-VRRGG 214
Query: 675 RGKKRGHQPKEVSAEALDADLEKYREQAM 761
RG+ RG K +SAE LDADLEKY +AM
Sbjct: 215 RGRGRGRGEK-ISAEDLDADLEKYHSEAM 242
>ref|XP_002332459.1| predicted protein [Populus trichocarpa]
Length = 164
Score = 120 bits (301), Expect = 7e-25
Identities = 65/155 (41%), Positives = 99/155 (63%), Gaps = 13/155 (8%)
Frame = +3
Query: 336 GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIR 515
GT L++SNL+ V+ EDIK LFS++GDLK YS+HYD SGR +G A++V+ R DA++A++
Sbjct: 7 GTKLYISNLDFGVSTEDIKELFSEIGDLKRYSVHYDRSGRSEGTAEIVFARREDAVSAVK 66
Query: 516 RYNNRLLDGNRLTLVLSNSDVVT-SAIPPASHG------VETQRWAYGSYWQHGLVQVQG 674
RYNN LDG + + + +++ T A+PP+++G + R + G G + G
Sbjct: 67 RYNNVQLDGKPMKIEIVGTNIATRPAVPPSTNGMYRNQNIAAPRSSQGRGGTTGRPRGGG 126
Query: 675 RGKKRGHQPK------EVSAEALDADLEKYREQAM 761
G +RG + + ++SAE LDADLEKY +AM
Sbjct: 127 HGVRRGGRGRGRGRGEKISAEDLDADLEKYHSEAM 161
>ref|XP_004143092.1| PREDICTED: RNA and export factor-binding protein 2-like [Cucumis
sativus] gi|449508143|ref|XP_004163231.1| PREDICTED: RNA
and export factor-binding protein 2-like [Cucumis
sativus]
Length = 237
Score = 120 bits (300), Expect = 1e-24
Identities = 67/151 (44%), Positives = 94/151 (62%), Gaps = 9/151 (5%)
Frame = +3
Query: 336 GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIR 515
GT L++SNL+ V++EDIK LFS+VGD+K + IHYD SGR KG A+VV+ R DA+AA++
Sbjct: 84 GTKLYISNLDYGVSNEDIKELFSEVGDMKRHGIHYDKSGRSKGTAEVVFSRRLDAVAAVK 143
Query: 516 RYNNRLLDGNRLTLVLSNSDVVTSAIPPA--------SHGVETQRWAYGSYWQHGLVQVQ 671
+YNN LDG + + + +++ T A+ P S+G ++ G
Sbjct: 144 KYNNVQLDGKPMKIEIVGTNISTPAVGPTAAVNPFENSNGAPRRQQGRGGPPSRQRGHGF 203
Query: 672 GRGKKRGHQPKE-VSAEALDADLEKYREQAM 761
GRG+ RG P E VSAE LDADLEKY ++M
Sbjct: 204 GRGRGRGRGPSEKVSAEDLDADLEKYHAESM 234
>ref|XP_006846043.1| hypothetical protein AMTR_s00012p00035940 [Amborella trichopoda]
gi|548848813|gb|ERN07718.1| hypothetical protein
AMTR_s00012p00035940 [Amborella trichopoda]
Length = 253
Score = 119 bits (299), Expect = 1e-24
Identities = 71/158 (44%), Positives = 100/158 (63%), Gaps = 16/158 (10%)
Frame = +3
Query: 336 GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIR 515
GT L++SNL+ V++EDIK LFS+VGDLK YSIHYD SGR KG A+VV+ R +DA+AA++
Sbjct: 93 GTKLYISNLDYGVSNEDIKELFSEVGDLKRYSIHYDRSGRSKGTAEVVFSRRADAVAAVK 152
Query: 516 RYNNRLLDGNRLTLVLSNSDVVTSA-IPPASHGV---------ETQRWAYGSYWQ----- 650
RYNN LDG + + + +++VT A IP ++G+ Q G +
Sbjct: 153 RYNNVQLDGKPMKIEIVGTNLVTPAPIPQVANGLLATPNGIPRSVQPRGAGIIGRGPRGG 212
Query: 651 -HGLVQVQGRGKKRGHQPKEVSAEALDADLEKYREQAM 761
G + +GRG + G + ++VSA LDADLEKY +AM
Sbjct: 213 GRGGGRGRGRGGRGGGRGEKVSAADLDADLEKYHSEAM 250
>gb|EXB52242.1| RNA and export factor-binding protein 2 [Morus notabilis]
Length = 248
Score = 119 bits (298), Expect = 2e-24
Identities = 72/160 (45%), Positives = 100/160 (62%), Gaps = 18/160 (11%)
Frame = +3
Query: 336 GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIR 515
GT L++SNL V++EDIK LFS+VGDLK Y+IHYD SGR KG A+VV+ R +DA+AA++
Sbjct: 87 GTKLYISNLEYGVSNEDIKELFSEVGDLKRYAIHYDRSGRSKGTAEVVFSRRADAVAAVK 146
Query: 516 RYNNRLLDGNRLTLVLSNSDVVTSAIPPA--------SHGVET--QRWAYGSYWQ----- 650
RYNN LDG + + + ++V T A PP S+G+ Q G++ +
Sbjct: 147 RYNNVQLDGKPMKIEIVGTNVATPAAPPPPANGSFGNSNGLPRGGQGRGGGAFGRPRGGG 206
Query: 651 ---HGLVQVQGRGKKRGHQPKEVSAEALDADLEKYREQAM 761
G + +GRG+ RG K +SA+ LDADLEKY +AM
Sbjct: 207 GGGRGPRRGRGRGQGRGTGEK-ISADDLDADLEKYHAEAM 245
>gb|ESW04085.1| hypothetical protein PHAVU_011G066000g [Phaseolus vulgaris]
Length = 234
Score = 119 bits (298), Expect = 2e-24
Identities = 66/153 (43%), Positives = 98/153 (64%), Gaps = 3/153 (1%)
Frame = +3
Query: 312 GGMKNENE-GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYER 488
GG + E GT L +SNL+ V+++DIK LFS+VGD+K + +HYD SGR KG A+VV+ R
Sbjct: 80 GGFASSIETGTKLFISNLDYGVSNDDIKELFSEVGDMKRHGVHYDRSGRSKGTAEVVFSR 139
Query: 489 HSDALAAIRRYNNRLLDGNRLTLVLSNSDVVTSAIPPASHGVETQRWAYGSYWQHGLV-- 662
+DA+AA++RYNN LDG + + ++ +++ T +P + G G Q G+
Sbjct: 140 RADAVAAVKRYNNVQLDGKPMKIEIAGANISTPGVPRSGQGRNGALRKPGGRGQ-GMQRD 198
Query: 663 QVQGRGKKRGHQPKEVSAEALDADLEKYREQAM 761
+ QGRG G + ++SA+ LDADLEKY +AM
Sbjct: 199 RGQGRGHGGGRRDDKLSADDLDADLEKYHAEAM 231
>ref|XP_003579071.1| PREDICTED: RNA and export factor-binding protein 2-like
[Brachypodium distachyon]
Length = 259
Score = 119 bits (297), Expect = 2e-24
Identities = 74/166 (44%), Positives = 97/166 (58%), Gaps = 24/166 (14%)
Frame = +3
Query: 336 GTMLHVSNLNLNVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIR 515
GT L++SNL+ NV++EDIK LFS+VGDLK YSI+YD SGR KG A+VV+ R SDALAA++
Sbjct: 95 GTKLYISNLDYNVSNEDIKELFSEVGDLKRYSINYDKSGRSKGTAEVVFARRSDALAALK 154
Query: 516 RYNNRLLDGNRLTLVLSNSDVVTSAIPPASHGVETQRWAYGSY-----------WQHGLV 662
RYNN LDG + + + +++ A PA + T GS+ W G
Sbjct: 155 RYNNVQLDGKPMQIEVIGTNIEAPA--PAIFTINTPALGIGSFDFPSKRLGGRGWPRGGG 212
Query: 663 QVQGRGK-------------KRGHQPKEVSAEALDADLEKYREQAM 761
GRG+ RG QP VSA+ LDADL+KY +AM
Sbjct: 213 GFGGRGRGGRGAVGRGQGRGGRGSQP--VSADDLDADLDKYHSEAM 256
>ref|XP_003538006.1| PREDICTED: THO complex subunit 4-like isoform X1 [Glycine max]
gi|571488643|ref|XP_006590992.1| PREDICTED: THO complex
subunit 4-like isoform X2 [Glycine max]
Length = 247
Score = 119 bits (297), Expect = 2e-24
Identities = 75/206 (36%), Positives = 116/206 (56%), Gaps = 27/206 (13%)
Frame = +3
Query: 225 FSKRGSSRMMPYTTP----ATYQGIHMREMEMV--------GGMKNENEGTMLHVSNLNL 368
F R ++R PY T AT+Q + ++ G + GT L++SNL+
Sbjct: 39 FPNRAANRAAPYATAKAPEATWQHDLYADQQVAAAGYPAQGGRAASIETGTKLYISNLDY 98
Query: 369 NVTHEDIKVLFSDVGDLKWYSIHYDGSGRPKGNADVVYERHSDALAAIRRYNNRLLDGNR 548
V+ +DIK LF++VGDLK +++HYD SGR KG A+VV+ R +DA+AA++RYNN LDG
Sbjct: 99 GVSSDDIKELFAEVGDLKRHAVHYDRSGRSKGTAEVVFSRRADAVAAVKRYNNVQLDGKP 158
Query: 549 LTLVLSNSDVVTSAIPPASH-------GVETQRWAYGSYWQ------HGLVQVQGRGKKR 689
+ + + +++ T + PA + GV G + G+ + +GRG+ R
Sbjct: 159 MKIEIVGTNISTPGVAPARNGAIGNFDGVPRSGQGRGGALRRPGGRGQGVRRDRGRGRGR 218
Query: 690 G--HQPKEVSAEALDADLEKYREQAM 761
G + ++VSA+ LDADLEKY +AM
Sbjct: 219 GGAGRGEKVSADDLDADLEKYHAEAM 244