BLASTX nr result
ID: Catharanthus23_contig00029253
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00029253
(290 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group] 81 1e-13
gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexic... 80 1e-13
ref|XP_004974643.1| PREDICTED: uncharacterized protein LOC101776... 81 2e-13
gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Ja... 81 2e-13
emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group] 81 2e-13
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e... 80 2e-13
emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group] 80 2e-13
gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subc... 80 3e-13
gb|ABA98022.1| retrotransposon protein, putative, Ty3-gypsy subc... 80 4e-13
gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subc... 79 5e-13
gb|AAN05526.1| polyprotein [Oryza sativa Japonica Group] 79 5e-13
emb|CAE02926.1| OSJNBb0108J11.19 [Oryza sativa Japonica Group] g... 79 5e-13
emb|CAH66198.1| OSIGBa0148D14.4 [Oryza sativa Indica Group] 79 5e-13
gb|ABG66123.1| retrotransposon protein, putative, Ty3-gypsy subc... 79 5e-13
gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group] 79 5e-13
gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|1087... 79 5e-13
gb|AAT77372.1| putative polyprotein [Oryza sativa Japonica Group... 79 5e-13
emb|CAD41428.2| OSJNBb0032E06.10 [Oryza sativa Japonica Group] 79 5e-13
emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group] 79 5e-13
gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Ja... 79 5e-13
>gb|AAT85123.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1495
Score = 81.3 bits (199), Expect = 1e-13
Identities = 37/85 (43%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ R RLCVP+D ELK IL
Sbjct: 1009 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFHEDE-HGTIWLRERLCVPDDKELKDLILT 1067
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1068 EAHQTQYSIHPGSTKMYQDLKEKFW 1092
>gb|AEJ07934.1| Xilon1 gag-pol polyprotein [Zea mays subsp. mexicana]
Length = 1604
Score = 80.1 bits (196), Expect(2) = 1e-13
Identities = 35/88 (39%), Positives = 61/88 (69%)
Frame = -2
Query: 286 LTSTLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRK 107
L TL+ +I+ AQK++++ E + + +DFR +A+G ++F++RLCVPN ++
Sbjct: 1123 LEPTLEREIKEAQKNDEKISEIRRLILDGRGKDFRE-DAEGVVWFKDRLCVPNVQSIREL 1181
Query: 106 ILEEAHRSKYSMHPGENKIYKNIKQNFW 23
IL+EAH + YS+HPG K+Y+++K+ FW
Sbjct: 1182 ILKEAHETAYSIHPGSEKMYQDLKKKFW 1209
Score = 21.2 bits (43), Expect(2) = 1e-13
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -3
Query: 33 KTFGWNGMKRE 1
K F W GMKRE
Sbjct: 1206 KKFWWYGMKRE 1216
>ref|XP_004974643.1| PREDICTED: uncharacterized protein LOC101776408 [Setaria italica]
Length = 1375
Score = 80.9 bits (198), Expect = 2e-13
Identities = 41/88 (46%), Positives = 58/88 (65%)
Frame = -2
Query: 286 LTSTLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRK 107
+ TL+E I +AQ+ + + + KA+G E DG LYF+NR+ VP D L+R
Sbjct: 853 IQDTLKERIITAQEEDPWIKALYQQ-KAEGKIPELHQEEDGGLYFKNRIVVPEDKNLRRL 911
Query: 106 ILEEAHRSKYSMHPGENKIYKNIKQNFW 23
ILEEAH SK+S+HPG NK+Y+++KQ FW
Sbjct: 912 ILEEAHLSKFSIHPGTNKMYQDLKQRFW 939
>gb|AAK92560.1|AC051624_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431025|gb|AAP52863.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1714
Score = 80.9 bits (198), Expect = 2e-13
Identities = 37/85 (43%), Positives = 56/85 (65%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVPND ELK IL
Sbjct: 1228 TLVDQVRAAQVNDSEIAELKKNMRVGKARDFHEDE-HGTIWMGERLCVPNDKELKDLILT 1286
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1287 EAHQTQYSIHPGSTKMYQDLKEKFW 1311
>emb|CAE05045.2| OSJNBa0049H08.6 [Oryza sativa Japonica Group]
Length = 1523
Score = 80.9 bits (198), Expect = 2e-13
Identities = 39/92 (42%), Positives = 58/92 (63%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL+ IR AQK ++ +E R++ K D +++ G+++ R+CVP EL+ IL+
Sbjct: 1236 TLESQIREAQKDDEGIKELTKRIQEKKDTDL-SIDDQGTVWCGPRICVPAKKELRDLILK 1294
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFWVEWNEER 2
EAH S YS+HPG K+Y++IK FW WNE R
Sbjct: 1295 EAHESAYSIHPGSTKMYQDIKAYFWWAWNEAR 1326
>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
Length = 1053
Score = 80.5 bits (197), Expect = 2e-13
Identities = 38/88 (43%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKN---RVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRK 107
TLQ IR Q +++ +E K R KA G + + G+++F NR+CVPN ELK+
Sbjct: 575 TLQSQIREKQLEDEDIKEIKKNMRRGKAPGFSE----DEQGTVWFGNRICVPNQQELKQS 630
Query: 106 ILEEAHRSKYSMHPGENKIYKNIKQNFW 23
IL+EAH S YS+HPG K+Y+++K+ +W
Sbjct: 631 ILKEAHESPYSIHPGSTKMYQDLKEKYW 658
>emb|CAH66141.1| H0616A11.5 [Oryza sativa Indica Group]
Length = 1421
Score = 80.5 bits (197), Expect = 2e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ + DF E G+++ RLCVP+D ELK IL
Sbjct: 1013 TLVDQVRAAQVNDSEIAELKKNMRVRKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1071
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1072 EAHQTQYSIHPGSTKMYQDLKEKFW 1096
>gb|ABA95071.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1122
Score = 80.1 bits (196), Expect = 3e-13
Identities = 37/85 (43%), Positives = 58/85 (68%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL+ IR AQ+ ++ +E K +++ K L+ F T++ +++F +R+CVP ELK IL
Sbjct: 753 TLETQIREAQQEDEGMKEMKGKIRKKRLKGF-TIDDQDTVWFGSRICVPARKELKDLILR 811
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH S YS+HPG K+Y++IK+ FW
Sbjct: 812 EAHESAYSIHPGSTKMYQDIKEYFW 836
>gb|ABA98022.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1571
Score = 79.7 bits (195), Expect = 4e-13
Identities = 38/92 (41%), Positives = 59/92 (64%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVP+D ELK IL
Sbjct: 1190 TLVDQVRAAQVNDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1248
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFWVEWNEER 2
EAH+++YS+HPG K+Y+++K+ FW W E +
Sbjct: 1249 EAHQTQYSIHPGSTKMYQDLKEKFW--WAEHQ 1278
>gb|ABB47119.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1522
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVP+D ELK IL
Sbjct: 1036 TLVDQVRAAQANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1094
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1095 EAHQTQYSIHPGSTKMYQDLKEKFW 1119
>gb|AAN05526.1| polyprotein [Oryza sativa Japonica Group]
Length = 1471
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ +DF E G+++ RLCVP+D ELK IL
Sbjct: 1198 TLVDQVRTAQVNDPEIAELKKNMRVGKAQDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1256
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1257 EAHQTQYSIHPGSTKMYQDLKEKFW 1281
>emb|CAE02926.1| OSJNBb0108J11.19 [Oryza sativa Japonica Group]
gi|32489278|emb|CAE04619.1| OSJNBa0028I23.1 [Oryza sativa
Japonica Group]
Length = 1516
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E +G+++ RLCVP+D ELK IL
Sbjct: 1030 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFHEDE-NGTIWLGERLCVPDDKELKDLILT 1088
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1089 EAHQTQYSIHPGSTKMYQDLKEKFW 1113
>emb|CAH66198.1| OSIGBa0148D14.4 [Oryza sativa Indica Group]
Length = 1516
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E +G+++ RLCVP+D ELK IL
Sbjct: 1030 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFHEDE-NGTIWLGERLCVPDDKELKDLILT 1088
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1089 EAHQTQYSIHPGSTKMYQDLKEKFW 1113
>gb|ABG66123.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
Japonica Group]
Length = 1291
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ +DF E G+++ RLCVP+D ELK IL
Sbjct: 1018 TLVDQVRTAQVNDPEIAELKKNMRVGKAQDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1076
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1077 EAHQTQYSIHPGSTKMYQDLKEKFW 1101
>gb|AAV24913.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1850
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVP+D ELK IL
Sbjct: 1218 TLVDQVRAAQANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1276
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1277 EAHQTQYSIHPGSTKMYQDLKEKFW 1301
>gb|AAT85010.1| polyprotein [Oryza sativa Japonica Group] gi|108708868|gb|ABF96663.1|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1760
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVP+D ELK IL
Sbjct: 1274 TLVDQVRAAQANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1332
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1333 EAHQTQYSIHPGSTKMYQDLKEKFW 1357
>gb|AAT77372.1| putative polyprotein [Oryza sativa Japonica Group]
gi|51854392|gb|AAU10772.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1501
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E +G+++ RLCVP+D ELK IL
Sbjct: 1015 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFHEDE-NGTIWLGERLCVPDDKELKDLILT 1073
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1074 EAHQTQYSIHPGSTKMYQDLKEKFW 1098
>emb|CAD41428.2| OSJNBb0032E06.10 [Oryza sativa Japonica Group]
Length = 2120
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVP+D ELK IL
Sbjct: 1275 TLVDQVRAAQANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1333
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1334 EAHQTQYSIHPGSTKMYQDLKERFW 1358
>emb|CAD41692.1| OSJNBb0015D13.7 [Oryza sativa Japonica Group]
Length = 1516
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 57/85 (67%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E +G+++ RLCVP+D ELK IL
Sbjct: 1030 TLVDQVRAAQVNDPEIAELKKNMRVGKARDFHEDE-NGTIWLGERLCVPDDKELKDLILT 1088
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1089 EAHQTQYSIHPGSTKMYQDLKEKFW 1113
>gb|AAM74397.1|AC119149_12 Putative retroelement [Oryza sativa Japonica Group]
Length = 1512
Score = 79.3 bits (194), Expect = 5e-13
Identities = 36/85 (42%), Positives = 56/85 (65%)
Frame = -2
Query: 277 TLQEDIRSAQKSNKEFQEFKNRVKAKGLEDFRTLEADGSLYFRNRLCVPNDTELKRKILE 98
TL + +R+AQ ++ E E K ++ DF E G+++ RLCVP+D ELK IL
Sbjct: 1026 TLVDQVRAAQANDSEIAELKKNMRVGKARDFHEDE-HGTIWLGERLCVPDDKELKDLILT 1084
Query: 97 EAHRSKYSMHPGENKIYKNIKQNFW 23
EAH+++YS+HPG K+Y+++K+ FW
Sbjct: 1085 EAHQTQYSIHPGSTKMYQDLKEKFW 1109