BLASTX nr result

ID: Catharanthus23_contig00029175 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029175
         (315 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabac...   119   5e-25
gb|EMS53098.1| hypothetical protein TRIUR3_09014 [Triticum urartu]    114   2e-23
gb|EXC33546.1| hypothetical protein L484_006110 [Morus notabilis]     101   9e-20
ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulg...    96   6e-18
ref|YP_008992385.1| hypothetical protein Salmi_Mp140 (mitochondr...    94   2e-17
gb|EXB41435.1| hypothetical protein L484_007585 [Morus notabilis]      80   4e-13
ref|XP_006841557.1| hypothetical protein AMTR_s00003p00178580 [A...    57   3e-06

>ref|YP_173490.1| hypothetical protein NitaMp153 [Nicotiana tabacum]
           gi|56806655|dbj|BAD83556.1| hypothetical protein
           (mitochondrion) [Nicotiana tabacum]
          Length = 109

 Score =  119 bits (297), Expect = 5e-25
 Identities = 58/63 (92%), Positives = 60/63 (95%)
 Frame = +2

Query: 2   RGTNVVE*KSRRVTRSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDR 181
           +GTNVVE  SRRVTRSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDR
Sbjct: 47  KGTNVVEWNSRRVTRSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDR 106

Query: 182 KCG 190
           + G
Sbjct: 107 RYG 109


>gb|EMS53098.1| hypothetical protein TRIUR3_09014 [Triticum urartu]
          Length = 292

 Score =  114 bits (284), Expect = 2e-23
 Identities = 64/103 (62%), Positives = 66/103 (64%)
 Frame = +2

Query: 5   GTNVVE*KSRRVTRSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPGRSVLHSSDRK 184
           G +VV+  SRRVTRSTVPRCEVQVVMITPGYALAPLTGTP PA ARENP           
Sbjct: 108 GNSVVDLDSRRVTRSTVPRCEVQVVMITPGYALAPLTGTPGPAYARENP----------- 156

Query: 185 CG*RGHLHNLLPSVPML**GRAVRLSCSTAP*PGAHDALRNLH 313
                              GRAVRLSCST P PGAHDALRNLH
Sbjct: 157 -------------------GRAVRLSCSTVPLPGAHDALRNLH 180


>gb|EXC33546.1| hypothetical protein L484_006110 [Morus notabilis]
          Length = 201

 Score =  101 bits (252), Expect = 9e-20
 Identities = 45/47 (95%), Positives = 45/47 (95%)
 Frame = -2

Query: 227 GQKGEGCEGGLVIHTSGRMNGGPTDPGFHERWRVLECLSRALAHTPG 87
           GQKGEGCEGGLVIHTSGRMNGGPTDPGFHERWRVLECLSRAL HT G
Sbjct: 82  GQKGEGCEGGLVIHTSGRMNGGPTDPGFHERWRVLECLSRALVHTLG 128


>ref|YP_004222249.1| hypothetical protein BevumaM_p010 [Beta vulgaris subsp. maritima]
           gi|346683127|ref|YP_004842056.1| hypothetical protein
           BemaM_p008 [Beta macrocarpa]
           gi|317905687|emb|CBX33234.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|319439767|emb|CBX33286.1|
           hypothetical protein [Beta vulgaris subsp. maritima]
           gi|320147999|emb|CBJ20665.1| hypothetical protein [Beta
           vulgaris subsp. maritima] gi|345500045|emb|CBX24861.1|
           hypothetical protein [Beta macrocarpa]
           gi|384939224|emb|CBL52070.1| hypothetical protein
           (mitochondrion) [Beta vulgaris subsp. maritima]
          Length = 145

 Score = 95.5 bits (236), Expect = 6e-18
 Identities = 49/62 (79%), Positives = 53/62 (85%), Gaps = 3/62 (4%)
 Frame = +2

Query: 2   RGTNVVE*KSRRVTRSTVPRCEVQVVMITPGYALAPLTGTPEPANARENPG---RSVLHS 172
           RGTNVV+  S+RVTRSTVPRCEVQVVMITPGYALAPLTGTP PANARENPG    S+L +
Sbjct: 62  RGTNVVKWDSKRVTRSTVPRCEVQVVMITPGYALAPLTGTPGPANARENPGLGRSSILPT 121

Query: 173 SD 178
            D
Sbjct: 122 GD 123


>ref|YP_008992385.1| hypothetical protein Salmi_Mp140 (mitochondrion) [Salvia
           miltiorrhiza] gi|534292382|gb|AGU16674.1| hypothetical
           protein Salmi_Mp140 (mitochondrion) [Salvia
           miltiorrhiza]
          Length = 103

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 48/54 (88%), Positives = 50/54 (92%), Gaps = 1/54 (1%)
 Frame = -1

Query: 159 DRPG-FSRALAGSGVPVKGASAYPGVIITTCTSHLGTVERVTRLLFYSTTFVPL 1
           DRP   SRALAGSGVPVKGASAYPGVIITTCT HLGTVERVTRLLF+STTFVP+
Sbjct: 3   DRPTRVSRALAGSGVPVKGASAYPGVIITTCTLHLGTVERVTRLLFHSTTFVPV 56


>gb|EXB41435.1| hypothetical protein L484_007585 [Morus notabilis]
          Length = 176

 Score = 79.7 bits (195), Expect = 4e-13
 Identities = 40/51 (78%), Positives = 43/51 (84%)
 Frame = -1

Query: 153 PGFSRALAGSGVPVKGASAYPGVIITTCTSHLGTVERVTRLLFYSTTFVPL 1
           P +  AL G GV VKGASAYPGVIITT TSHLGTVERVTRLL +STTFVP+
Sbjct: 91  PRYGGALVGPGVSVKGASAYPGVIITTYTSHLGTVERVTRLLSHSTTFVPV 141


>ref|XP_006841557.1| hypothetical protein AMTR_s00003p00178580 [Amborella trichopoda]
           gi|548843578|gb|ERN03232.1| hypothetical protein
           AMTR_s00003p00178580 [Amborella trichopoda]
          Length = 476

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 30/47 (63%), Positives = 36/47 (76%)
 Frame = -1

Query: 141 RALAGSGVPVKGASAYPGVIITTCTSHLGTVERVTRLLFYSTTFVPL 1
           +ALAG GVPVKG+SAYPGVIITTC SH  TVE+    L +ST  +P+
Sbjct: 429 KALAGRGVPVKGSSAYPGVIITTCISHPCTVEQ----LSHSTMPIPI 471


Top