BLASTX nr result

ID: Catharanthus23_contig00029116 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00029116
         (596 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003550059.1| PREDICTED: F-box/kelch-repeat protein At3g23...    62   9e-08
gb|ACU19299.1| unknown [Glycine max]                                   62   9e-08
gb|EEE68606.1| hypothetical protein OsJ_27141 [Oryza sativa Japo...    57   3e-06
gb|EAZ06837.1| hypothetical protein OsI_29074 [Oryza sativa Indi...    57   3e-06
gb|EAZ06838.1| hypothetical protein OsI_29075 [Oryza sativa Indi...    57   3e-06
ref|XP_004296034.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   4e-06
ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06...    57   5e-06
ref|XP_006580214.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   6e-06
ref|XP_006585270.1| PREDICTED: F-box/kelch-repeat protein At3g23...    56   8e-06

>ref|XP_003550059.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 394

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = +2

Query: 242 VDLPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH----SPPTLGLLIMDPI 409
           VDLP++++ EI+  +PVKSL+RFKTV KSWLS I DP F  +H    + PT  LL + PI
Sbjct: 30  VDLPQELIHEILLRLPVKSLIRFKTVCKSWLSHISDPHFTASHFKLGAAPTERLLFLSPI 89

Query: 410 A 412
           A
Sbjct: 90  A 90


>gb|ACU19299.1| unknown [Glycine max]
          Length = 394

 Score = 62.4 bits (150), Expect = 9e-08
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = +2

Query: 242 VDLPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH----SPPTLGLLIMDPI 409
           VDLP++++ EI+  +PVKSL+RFKTV KSWLS I DP F  +H    + PT  LL + PI
Sbjct: 30  VDLPQELIHEILLRLPVKSLIRFKTVCKSWLSHISDPHFTASHFKLGAAPTERLLFLSPI 89

Query: 410 A 412
           A
Sbjct: 90  A 90


>gb|EEE68606.1| hypothetical protein OsJ_27141 [Oryza sativa Japonica Group]
          Length = 219

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +2

Query: 239 TVDLPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH 370
           TV+LP++I+ E++ W+PVKSL RFK+V K+WLS I + CF + H
Sbjct: 38  TVELPDEIVREVLIWLPVKSLARFKSVCKAWLSIISESCFIREH 81


>gb|EAZ06837.1| hypothetical protein OsI_29074 [Oryza sativa Indica Group]
          Length = 347

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +2

Query: 239 TVDLPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH 370
           TV+LP++I+ E++ W+PVKSL RFK+V K+WLS I + CF + H
Sbjct: 38  TVELPDEIVREVLIWLPVKSLARFKSVCKAWLSIISESCFIREH 81


>gb|EAZ06838.1| hypothetical protein OsI_29075 [Oryza sativa Indica Group]
          Length = 210

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 24/44 (54%), Positives = 35/44 (79%)
 Frame = +2

Query: 239 TVDLPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH 370
           TV+LP++I+ E++ W+PVKSL RFK+V K+WLS I + CF + H
Sbjct: 38  TVELPDEIVREVLIWLPVKSLARFKSVCKAWLSIISESCFIREH 81


>ref|XP_004296034.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Fragaria
           vesca subsp. vesca]
          Length = 320

 Score = 57.0 bits (136), Expect = 4e-06
 Identities = 26/46 (56%), Positives = 33/46 (71%)
 Frame = +2

Query: 248 LPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAHSPPTL 385
           LP +++ EI+ W+PVKS+ RF+ VSKSW S ILDP F K HS   L
Sbjct: 15  LPMEVIREILSWLPVKSVCRFRCVSKSWKSLILDPQFVKLHSDKAL 60


>ref|XP_003528639.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Glycine max]
          Length = 375

 Score = 56.6 bits (135), Expect = 5e-06
 Identities = 26/44 (59%), Positives = 35/44 (79%)
 Frame = +2

Query: 239 TVDLPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH 370
           TV LP++++ +I+  +PVKSL+RFK VSKSWLS I DP F K+H
Sbjct: 15  TVFLPQELIIQILLRLPVKSLLRFKCVSKSWLSLITDPHFAKSH 58


>ref|XP_006580214.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 384

 Score = 56.2 bits (134), Expect = 6e-06
 Identities = 26/41 (63%), Positives = 30/41 (73%)
 Frame = +2

Query: 248 LPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH 370
           L ED++ EI+ WVPVKSLMRF+ VSKSW S I  P F K H
Sbjct: 5   LSEDLIVEILTWVPVKSLMRFRCVSKSWNSLIFHPAFVKLH 45


>ref|XP_006585270.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Glycine max]
          Length = 402

 Score = 55.8 bits (133), Expect = 8e-06
 Identities = 25/41 (60%), Positives = 30/41 (73%)
 Frame = +2

Query: 248 LPEDILWEIIKWVPVKSLMRFKTVSKSWLSTILDPCFGKAH 370
           LPE+++ EI+ WVPVK LMRFK VSK+W S I  P F K H
Sbjct: 8   LPEELIVEILSWVPVKPLMRFKCVSKTWNSLIFHPTFVKLH 48


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