BLASTX nr result
ID: Catharanthus23_contig00029083
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00029083
(574 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera] 133 3e-29
ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [S... 132 8e-29
emb|CAN74058.1| hypothetical protein VITISV_027639 [Vitis vinifera] 116 5e-24
ref|XP_006392191.1| hypothetical protein EUTSA_v10024111mg, part... 111 1e-22
ref|XP_002332457.1| predicted protein [Populus trichocarpa] 110 3e-22
ref|XP_006370439.1| hypothetical protein POPTR_0001s42560g, part... 102 9e-20
ref|XP_002310747.1| predicted protein [Populus trichocarpa] 101 2e-19
ref|XP_004149684.1| PREDICTED: enzymatic polyprotein-like [Cucum... 89 8e-16
ref|XP_004253508.1| PREDICTED: genome polyprotein-like [Solanum ... 87 4e-15
ref|XP_006369011.1| hypothetical protein POPTR_0001s156651g, par... 82 7e-14
ref|XP_006374366.1| hypothetical protein POPTR_0015s06460g [Popu... 82 1e-13
emb|CAN82625.1| hypothetical protein VITISV_010133 [Vitis vinifera] 80 3e-13
ref|XP_002302814.2| hypothetical protein POPTR_0002s22830g [Popu... 80 4e-13
ref|XP_002336184.1| predicted protein [Populus trichocarpa] 76 7e-12
ref|XP_002317585.2| hypothetical protein POPTR_0011s10715g [Popu... 73 4e-11
gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus] ... 72 1e-10
sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Inclu... 71 2e-10
gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus] 71 2e-10
gb|AGT42182.1| reverse transcriptase [Cauliflower mosaic virus] 71 2e-10
gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus] 71 2e-10
>emb|CAN66051.1| hypothetical protein VITISV_018870 [Vitis vinifera]
Length = 2913
Score = 133 bits (335), Expect = 3e-29
Identities = 62/106 (58%), Positives = 82/106 (77%)
Frame = -3
Query: 572 HQPQLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFN 393
+Q LVR+ SG WN +Q NY+T+ KEIL+IV CI KFQDDL NQ+F+++ DC++AK +
Sbjct: 1057 NQELLVRFTSGTWNHAQLNYSTIKKEILSIVLCISKFQDDLLNQEFLLRVDCKSAKSVLQ 1116
Query: 392 KDFKHDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEYLQ 255
KD K+ SK +FARWQA L+ FDF I Y KGE+N++PDFLT E+LQ
Sbjct: 1117 KDVKNIASKHIFARWQAILSNFDFQIEYIKGENNSIPDFLTREFLQ 1162
>ref|XP_002447697.1| hypothetical protein SORBIDRAFT_06g013680 [Sorghum bicolor]
gi|241938880|gb|EES12025.1| hypothetical protein
SORBIDRAFT_06g013680 [Sorghum bicolor]
Length = 1360
Score = 132 bits (331), Expect = 8e-29
Identities = 64/109 (58%), Positives = 85/109 (77%)
Frame = -3
Query: 563 QLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDF 384
QLV + SG WND+Q+NY+T+ KEILAIVK + KFQ +L NQKF+++ DC+AAK + +D
Sbjct: 1244 QLVWFASGTWNDAQRNYSTIKKEILAIVKIVSKFQGELLNQKFLLRIDCKAAKDVLQQDV 1303
Query: 383 KHDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEYLQHAGQGK 237
++ VSKQ+FARWQA L+ FDFDI + KGE N+LPDFL+ E+LQ G K
Sbjct: 1304 ENLVSKQIFARWQAILSCFDFDIEHIKGEVNSLPDFLSREFLQGYGTQK 1352
>emb|CAN74058.1| hypothetical protein VITISV_027639 [Vitis vinifera]
Length = 335
Score = 116 bits (290), Expect = 5e-24
Identities = 55/99 (55%), Positives = 72/99 (72%)
Frame = -3
Query: 572 HQPQLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFN 393
+Q LVR+ SG WN +Q NY T+ KE L+IV CI KFQDDL NQ+F+++ DC++AK +
Sbjct: 234 NQELLVRFTSGTWNHAQLNYNTIKKENLSIVLCISKFQDDLLNQEFLLRVDCKSAKSVLQ 293
Query: 392 KDFKHDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDF 276
KD K+ SK +FARWQA L+ FDF I Y KGE N++P F
Sbjct: 294 KDVKNIASKHIFARWQAILSNFDFQIEYIKGEKNSIPGF 332
>ref|XP_006392191.1| hypothetical protein EUTSA_v10024111mg, partial [Eutrema
salsugineum] gi|557088697|gb|ESQ29477.1| hypothetical
protein EUTSA_v10024111mg, partial [Eutrema salsugineum]
Length = 844
Score = 111 bits (277), Expect = 1e-22
Identities = 53/99 (53%), Positives = 71/99 (71%)
Frame = -3
Query: 545 SGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFKHDVSK 366
S K + + NY+T+ KEIL+IV CI KFQ DL N F+++ DC++ K + KD KH SK
Sbjct: 573 SFKTQNKKLNYSTIKKEILSIVLCIQKFQSDLLNNFFLLRIDCKSVKDVLQKDVKHLASK 632
Query: 365 QMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEYLQHA 249
+FARWQA L+ FDFDI Y KG+ N++PDFLT E LQ++
Sbjct: 633 HIFARWQAILSIFDFDIKYIKGDSNSVPDFLTRELLQNS 671
>ref|XP_002332457.1| predicted protein [Populus trichocarpa]
Length = 227
Score = 110 bits (274), Expect = 3e-22
Identities = 51/91 (56%), Positives = 69/91 (75%)
Frame = -3
Query: 572 HQPQLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFN 393
++ Q+++Y S WND QKNY+T KEIL+IV CI KFQ DL NQKF+++ DC++AK +
Sbjct: 137 NKEQILQYTSAHWNDCQKNYSTTKKEILSIVLCITKFQSDLLNQKFLLRVDCKSAKEVLQ 196
Query: 392 KDFKHDVSKQMFARWQAHLAPFDFDILYKKG 300
KD ++ SKQ+FARWQA L+ F FDI+Y KG
Sbjct: 197 KDVQNLASKQIFARWQAILSIFYFDIVYIKG 227
>ref|XP_006370439.1| hypothetical protein POPTR_0001s42560g, partial [Populus
trichocarpa] gi|550349620|gb|ERP67008.1| hypothetical
protein POPTR_0001s42560g, partial [Populus trichocarpa]
Length = 387
Score = 102 bits (253), Expect = 9e-20
Identities = 48/80 (60%), Positives = 63/80 (78%)
Frame = -3
Query: 521 KNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFKHDVSKQMFARWQA 342
KNY+TV KEIL+IV CI KFQ DL NQKF+++ DC++AK + KD ++ SKQ+FARWQA
Sbjct: 1 KNYSTVKKEILSIVLCITKFQSDLLNQKFLLRVDCKSAKEVLQKDVQNLASKQIFARWQA 60
Query: 341 HLAPFDFDILYKKGEDNNLP 282
L+ FDFDI Y KG+ N++P
Sbjct: 61 ILSIFDFDIEYIKGDYNSIP 80
>ref|XP_002310747.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 101 bits (251), Expect = 2e-19
Identities = 50/104 (48%), Positives = 72/104 (69%)
Frame = -3
Query: 563 QLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDF 384
Q+++Y S WN QK Y+T+ KEIL+IV CI KFQ +L NQKF+++ + + AK + K+
Sbjct: 102 QILQYTSAHWNVCQKIYSTIKKEILSIVLCITKFQSNLLNQKFLLRVNFKYAKEILQKNI 161
Query: 383 KHDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEYLQH 252
++ SKQ ARWQA L+ F FDI+ KG N++ DFLT E+ Q+
Sbjct: 162 QNLASKQNSARWQAILSIFYFDIVCIKGNSNSILDFLTREFFQN 205
>ref|XP_004149684.1| PREDICTED: enzymatic polyprotein-like [Cucumis sativus]
Length = 252
Score = 89.0 bits (219), Expect = 8e-16
Identities = 40/69 (57%), Positives = 55/69 (79%)
Frame = -3
Query: 560 LVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFK 381
+VRYHSG WN +QKNY+ V KEILAIV + KFQ DL N++F ++TD +A+K++F KD K
Sbjct: 184 IVRYHSGIWNSAQKNYSIVKKEILAIVLSVQKFQGDLINKEFFVRTDSKASKYIFEKDVK 243
Query: 380 HDVSKQMFA 354
+ +SKQ+FA
Sbjct: 244 NLISKQIFA 252
>ref|XP_004253508.1| PREDICTED: genome polyprotein-like [Solanum lycopersicum]
Length = 545
Score = 86.7 bits (213), Expect = 4e-15
Identities = 38/75 (50%), Positives = 54/75 (72%)
Frame = -3
Query: 563 QLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDF 384
Q++ + S WN +Q+NY+TV KE+LAIV I FQ DL NQKF+++ DC++AK + KD
Sbjct: 339 QIIAFTSKHWNPAQQNYSTVKKEVLAIVLSISNFQSDLINQKFLVRVDCKSAKEILQKDV 398
Query: 383 KHDVSKQMFARWQAH 339
K+ SK +FARW+ H
Sbjct: 399 KNLASKHIFARWEDH 413
>ref|XP_006369011.1| hypothetical protein POPTR_0001s156651g, partial [Populus
trichocarpa] gi|550347370|gb|ERP65580.1| hypothetical
protein POPTR_0001s156651g, partial [Populus
trichocarpa]
Length = 787
Score = 82.4 bits (202), Expect = 7e-14
Identities = 42/83 (50%), Positives = 58/83 (69%)
Frame = -3
Query: 497 EILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFKHDVSKQMFARWQAHLAPFDFD 318
EIL+IV CI KFQ DL NQKF+++ D ++AK ++FAR QA L+ FDFD
Sbjct: 372 EILSIVLCITKFQSDLLNQKFLLRVDSKSAK-------------EIFARRQAILSIFDFD 418
Query: 317 ILYKKGEDNNLPDFLTHEYLQHA 249
I+Y KG+ N++PDFLT E+LQ++
Sbjct: 419 IVYIKGDSNSIPDFLTREFLQNS 441
>ref|XP_006374366.1| hypothetical protein POPTR_0015s06460g [Populus trichocarpa]
gi|550322125|gb|ERP52163.1| hypothetical protein
POPTR_0015s06460g [Populus trichocarpa]
Length = 500
Score = 81.6 bits (200), Expect = 1e-13
Identities = 37/68 (54%), Positives = 51/68 (75%)
Frame = -3
Query: 455 DLYNQKFIIKTDCQAAKFMFNKDFKHDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDF 276
DL NQKF+++ DC++ K + KD K+ KQ+FARWQA L+ F FDI+Y KG N++PDF
Sbjct: 431 DLLNQKFLLRVDCKSIKEVLQKDVKNLALKQIFARWQAILSIFYFDIIYIKGYSNSIPDF 490
Query: 275 LTHEYLQH 252
LT E+LQ+
Sbjct: 491 LTREFLQN 498
>emb|CAN82625.1| hypothetical protein VITISV_010133 [Vitis vinifera]
Length = 1102
Score = 80.5 bits (197), Expect = 3e-13
Identities = 38/71 (53%), Positives = 50/71 (70%)
Frame = -3
Query: 569 QPQLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNK 390
Q +LVRY SG WN++Q NY T+ KEIL+IV CI KFQDDL NQ+F+++ DC +AK + K
Sbjct: 1009 QEKLVRYTSGTWNNAQLNYNTIKKEILSIVLCISKFQDDLLNQEFLLRVDCLSAKSVLQK 1068
Query: 389 DFKHDVSKQMF 357
D + K F
Sbjct: 1069 DPRPVXKKXKF 1079
>ref|XP_002302814.2| hypothetical protein POPTR_0002s22830g [Populus trichocarpa]
gi|550345629|gb|EEE82087.2| hypothetical protein
POPTR_0002s22830g [Populus trichocarpa]
Length = 600
Score = 80.1 bits (196), Expect = 4e-13
Identities = 37/73 (50%), Positives = 53/73 (72%)
Frame = -3
Query: 572 HQPQLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFN 393
++ Q++ Y S WND QKNY+T+ K+IL+IV I KFQ DL NQKF+++ DC++AK +
Sbjct: 528 NKEQILWYTSTHWNDCQKNYSTIKKKILSIVLYITKFQSDLLNQKFLLRVDCKSAKEVLQ 587
Query: 392 KDFKHDVSKQMFA 354
KD + SKQ+FA
Sbjct: 588 KDVNNLASKQIFA 600
>ref|XP_002336184.1| predicted protein [Populus trichocarpa]
Length = 231
Score = 75.9 bits (185), Expect = 7e-12
Identities = 32/56 (57%), Positives = 45/56 (80%)
Frame = -3
Query: 572 HQPQLVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAK 405
++ Q+++Y S WND QKNY+T+ KEIL+IV CI KFQ DL NQKF+++ DC++AK
Sbjct: 173 NKEQILQYTSTHWNDCQKNYSTIKKEILSIVLCITKFQSDLLNQKFLLRVDCKSAK 228
>ref|XP_002317585.2| hypothetical protein POPTR_0011s10715g [Populus trichocarpa]
gi|550328123|gb|EEE98197.2| hypothetical protein
POPTR_0011s10715g [Populus trichocarpa]
Length = 224
Score = 73.2 bits (178), Expect = 4e-11
Identities = 34/73 (46%), Positives = 51/73 (69%)
Frame = -3
Query: 470 LKFQDDLYNQKFIIKTDCQAAKFMFNKDFKHDVSKQMFARWQAHLAPFDFDILYKKGEDN 291
+KFQ DL NQKF++ +C+ AK + KD ++ SKQ+F +W+ L+ F F I Y KG+ N
Sbjct: 1 MKFQSDLLNQKFLLFINCKFAKEVLQKDVQNIASKQIFTQWKVILSIFYFGIEYIKGDTN 60
Query: 290 NLPDFLTHEYLQH 252
+P+FLT E+LQ+
Sbjct: 61 FIPNFLTREFLQN 73
>gb|AGT42056.1| reverse transcriptase [Cauliflower mosaic virus]
gi|530722419|gb|AGT42084.1| reverse transcriptase
[Cauliflower mosaic virus]
Length = 675
Score = 71.6 bits (174), Expect = 1e-10
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = -3
Query: 560 LVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFK 381
+ RY SG + ++KNY + KE LA++ I KF L F+I+TD K N ++K
Sbjct: 571 ICRYASGSFKTAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYK 630
Query: 380 HDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEY 261
D RWQA L+ + FD+ + KG DN+ DFL+ E+
Sbjct: 631 GDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670
>sp|P03556.1|POL_CAMVD RecName: Full=Enzymatic polyprotein; Includes: RecName:
Full=Aspartic protease; Includes: RecName:
Full=Endonuclease; Includes: RecName: Full=Reverse
transcriptase
Length = 674
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = -3
Query: 560 LVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFK 381
+ RY SG + ++KNY + KE LA++ I KF L F+I+TD K N ++K
Sbjct: 570 ICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYK 629
Query: 380 HDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEY 261
D RWQA L+ + FD+ + KG DN+ DFL+ E+
Sbjct: 630 GDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 669
>gb|AGT42189.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = -3
Query: 560 LVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFK 381
+ RY SG + ++KNY + KE LA++ I KF L F+I+TD K N ++K
Sbjct: 571 ICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYK 630
Query: 380 HDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEY 261
D RWQA L+ + FD+ + KG DN+ DFL+ E+
Sbjct: 631 GDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670
>gb|AGT42182.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = -3
Query: 560 LVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFK 381
+ RY SG + ++KNY + KE LA++ I KF L F+I+TD K N ++K
Sbjct: 571 ICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYK 630
Query: 380 HDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEY 261
D RWQA L+ + FD+ + KG DN+ DFL+ E+
Sbjct: 631 GDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670
>gb|AGT42175.1| reverse transcriptase [Cauliflower mosaic virus]
Length = 675
Score = 71.2 bits (173), Expect = 2e-10
Identities = 38/100 (38%), Positives = 56/100 (56%)
Frame = -3
Query: 560 LVRYHSGKWNDSQKNYATVAKEILAIVKCILKFQDDLYNQKFIIKTDCQAAKFMFNKDFK 381
+ RY SG + ++KNY + KE LA++ I KF L F+I+TD K N ++K
Sbjct: 571 ICRYASGSFKAAEKNYHSNDKETLAVINTIKKFSIYLTPVHFLIRTDNTHFKSFVNLNYK 630
Query: 380 HDVSKQMFARWQAHLAPFDFDILYKKGEDNNLPDFLTHEY 261
D RWQA L+ + FD+ + KG DN+ DFL+ E+
Sbjct: 631 GDSKLGRNIRWQAWLSHYSFDVEHIKGTDNHFADFLSREF 670