BLASTX nr result

ID: Catharanthus23_contig00028964 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028964
         (1195 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera]   107   1e-20
ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252...   104   6e-20
ref|XP_006347698.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-lik...    84   1e-13
ref|XP_004231230.1| PREDICTED: uncharacterized protein LOC101250...    81   7e-13
ref|XP_004295340.1| PREDICTED: uncharacterized protein LOC101295...    61   8e-07

>emb|CAN66102.1| hypothetical protein VITISV_041147 [Vitis vinifera]
          Length = 579

 Score =  107 bits (266), Expect = 1e-20
 Identities = 114/362 (31%), Positives = 156/362 (43%), Gaps = 17/362 (4%)
 Frame = -2

Query: 1059 RSKSVQWRRYQQEEE--SRAVEDTPDTSRSLDNTPLVVAFGSHNRNTKAGGAAVPSNSSS 886
            RS S Q RR  QE E  S A E+ P+T+RSL+ TP V              +   +   S
Sbjct: 78   RSTSAQRRRQNQELEPLSCADENRPETARSLE-TPFV--------------SQCKAPLMS 122

Query: 885  SKKNHQRGKRLKENNSEGAKEELLLHPSDVVXXXXXXXXXXXXXXXXXXSRPDTPVVLVA 706
            S++  +  K  KEN   G ++   L                         RPDTP+V  +
Sbjct: 123  SQRKQRVVKLFKENGGRGEQQ---LPDGLRSKVCDGGKPIGRSTNGVASLRPDTPIVS-S 178

Query: 705  DRDRIVPSRYRLTAQSCHRPSVSSGNSGVVATSAAARLLQEA-------TSGIGMLNSGR 547
              DRIV SR+RL   + HR   SS  S + A SAA +LLQ +       TS +G    G 
Sbjct: 179  SMDRIVSSRFRLMTPNSHR---SSNASAMPAASAATKLLQSSGMSLSTQTSSVGGKVDGV 235

Query: 546  TSNESN--------DDRLAPLQKKLTXXXXXXXXXXXXSDLYTAAATAPQVGXXXXXXXX 391
            +S +          DD    + +K+                 +       +         
Sbjct: 236  SSQQDTCANPSSLVDDNDDKIDQKIAQNRANEPALSDSESCSSIIQGIKPISSSSPVQNC 295

Query: 390  XXSNKTRTISDVRSSMPEVDMLPTVSPRWLADRNSNGFNTDGNCNDLSSSKFTASTCSRS 211
                KTR+ +++RSSMPE DMLPT+S R LA+RN       GN N   SSKF+AS  SRS
Sbjct: 296  ----KTRSHNELRSSMPEADMLPTMSTRLLAERNCG----RGNVNGAESSKFSASPFSRS 347

Query: 210  LNWPTSSTGEHXXXXXXSWLCLRANDLTVAHTPSRALLRNQNGSACLPPHPSCIKSGAEE 31
            LN   SS+ +       +   L A+ L+  HT S      +NGS  LPP P C K G + 
Sbjct: 348  LNLTPSSSDQSLFHSIKTSEKL-ASVLSKPHTNSM-----KNGSIYLPPLPPCTKPGTDA 401

Query: 30   KE 25
            ++
Sbjct: 402  RK 403


>ref|XP_002273695.1| PREDICTED: uncharacterized protein LOC100252686 [Vitis vinifera]
          Length = 614

 Score =  104 bits (260), Expect = 6e-20
 Identities = 113/362 (31%), Positives = 155/362 (42%), Gaps = 17/362 (4%)
 Frame = -2

Query: 1059 RSKSVQWRRYQQEEE--SRAVEDTPDTSRSLDNTPLVVAFGSHNRNTKAGGAAVPSNSSS 886
            RS S Q RR  QE E  S A E+ P+ +RSL+ TP V              +   +   S
Sbjct: 74   RSTSAQRRRQNQELEPLSCADENRPEMARSLE-TPFV--------------SQCKAPLMS 118

Query: 885  SKKNHQRGKRLKENNSEGAKEELLLHPSDVVXXXXXXXXXXXXXXXXXXSRPDTPVVLVA 706
            S++  +  K  KEN   G ++   L                         RPDTP+V  +
Sbjct: 119  SQRKQRVVKLFKENGGRGEQQ---LPDGLRSKVCDGGKPIGRSTNGVASLRPDTPIVS-S 174

Query: 705  DRDRIVPSRYRLTAQSCHRPSVSSGNSGVVATSAAARLLQEA-------TSGIGMLNSGR 547
              DRIV SR+RL   + HR   SS  S + A SAA +LLQ +       TS +G    G 
Sbjct: 175  SMDRIVSSRFRLMTPNSHR---SSNASAMPAASAATKLLQSSGMSLSTQTSSVGGKVDGV 231

Query: 546  TSNESN--------DDRLAPLQKKLTXXXXXXXXXXXXSDLYTAAATAPQVGXXXXXXXX 391
            +S +          DD    + +K+                 +       +         
Sbjct: 232  SSQQDTCANPSSLVDDNDDKIDQKIAQNRANEPALSDSESCSSIIQGIKPISSSSPVQNC 291

Query: 390  XXSNKTRTISDVRSSMPEVDMLPTVSPRWLADRNSNGFNTDGNCNDLSSSKFTASTCSRS 211
                KTR+ +++RSSMPE DMLPT+S R LA+RN       GN N   SSKF+AS  SRS
Sbjct: 292  ----KTRSHNELRSSMPEADMLPTMSTRLLAERNCG----RGNVNGAESSKFSASPFSRS 343

Query: 210  LNWPTSSTGEHXXXXXXSWLCLRANDLTVAHTPSRALLRNQNGSACLPPHPSCIKSGAEE 31
            LN   SS+ +       +   L A+ L+  HT S      +NGS  LPP P C K G + 
Sbjct: 344  LNLTPSSSDQSLFHSIKTSEKL-ASVLSKPHTNSM-----KNGSIYLPPLPPCTKPGTDA 397

Query: 30   KE 25
            ++
Sbjct: 398  RK 399


>ref|XP_006347698.1| PREDICTED: protein ENDOSPERM DEFECTIVE 1-like [Solanum tuberosum]
          Length = 587

 Score = 83.6 bits (205), Expect = 1e-13
 Identities = 76/237 (32%), Positives = 111/237 (46%)
 Frame = -2

Query: 735 RPDTPVVLVADRDRIVPSRYRLTAQSCHRPSVSSGNSGVVATSAAARLLQEATSGIGMLN 556
           R DTP V  A R  +VPSRY+ T QS +R   ++   G  A SAA +LL+E T+      
Sbjct: 176 RLDTPTVTGASR--VVPSRYKFTPQSLNRHCPTNTPGG--AISAADKLLREITA-----T 226

Query: 555 SGRTSNESNDDRLAPLQKKLTXXXXXXXXXXXXSDLYTAAATAPQVGXXXXXXXXXXSNK 376
                + S DD  A + +KL+             D         +            +NK
Sbjct: 227 PINPCSVSQDDG-ALISRKLS-----KVSTSPYVDSCATGTATTKGSSCPSSPLCTQNNK 280

Query: 375 TRTISDVRSSMPEVDMLPTVSPRWLADRNSNGFNTDGNCNDLSSSKFTASTCSRSLNWPT 196
           TR +S +RSSM E+D       R L +R     N D + ++ SS K  +STC+RSL+ PT
Sbjct: 281 TRMLSAMRSSMSEID-------RCLTER-----NRDSSVDECSSYKSASSTCARSLHLPT 328

Query: 195 SSTGEHXXXXXXSWLCLRANDLTVAHTPSRALLRNQNGSACLPPHPSCIKSGAEEKE 25
           ++          SWL L+ ND+  + +  +       GS CLPPHP+  K GA+ ++
Sbjct: 329 ANN-----ENSSSWLSLKQNDMFASRSSFKM------GSLCLPPHPTSNKLGADARK 374


>ref|XP_004231230.1| PREDICTED: uncharacterized protein LOC101250937 [Solanum
           lycopersicum]
          Length = 587

 Score = 81.3 bits (199), Expect = 7e-13
 Identities = 74/234 (31%), Positives = 105/234 (44%)
 Frame = -2

Query: 735 RPDTPVVLVADRDRIVPSRYRLTAQSCHRPSVSSGNSGVVATSAAARLLQEATSGIGMLN 556
           R DTP V  A R  +VPSRY+ T QS +R   +S   G +  SAA +LL+E T+      
Sbjct: 176 RLDTPTVTGASR--VVPSRYKFTPQSLNRHCPTSTPGGTI--SAADKLLREITA-----T 226

Query: 555 SGRTSNESNDDRLAPLQKKLTXXXXXXXXXXXXSDLYTAAATAPQVGXXXXXXXXXXSNK 376
                + S DD     +K                   T  ++ P             +NK
Sbjct: 227 PINPCSVSQDDGALVSRKLSKVSTSPYVDSCATGTATTKGSSCPS------SPLCPQNNK 280

Query: 375 TRTISDVRSSMPEVDMLPTVSPRWLADRNSNGFNTDGNCNDLSSSKFTASTCSRSLNWPT 196
           TRT+S +RSS  E+D       R L +R     N D + ++ SS K   STC+RSL+ PT
Sbjct: 281 TRTLSAMRSSTSEID-------RCLTER-----NRDSSVDECSSYKSAFSTCARSLHLPT 328

Query: 195 SSTGEHXXXXXXSWLCLRANDLTVAHTPSRALLRNQNGSACLPPHPSCIKSGAE 34
           ++          SWL L+ ND+  + +  +       G  CLPPHP+  K GA+
Sbjct: 329 ANN-----ENSSSWLSLKQNDMFASRSSFKM------GGLCLPPHPTSNKLGAD 371


>ref|XP_004295340.1| PREDICTED: uncharacterized protein LOC101295210 [Fragaria vesca
           subsp. vesca]
          Length = 468

 Score = 61.2 bits (147), Expect = 8e-07
 Identities = 40/108 (37%), Positives = 56/108 (51%)
 Frame = -2

Query: 375 TRTISDVRSSMPEVDMLPTVSPRWLADRNSNGFNTDGNCNDLSSSKFTASTCSRSLNWPT 196
           +R +SD+RSSMPE +MLPTVS R  ++++ N        N    SK +AS CSRSLN P 
Sbjct: 164 SRCLSDIRSSMPESNMLPTVSSRQTSEKSCN--------NGGGFSKISASPCSRSLNLPL 215

Query: 195 SSTGEHXXXXXXSWLCLRANDLTVAHTPSRALLRNQNGSACLPPHPSC 52
           SS+ EH       +  ++ ++   +            G  CLPP P C
Sbjct: 216 SSS-EH-----LHFQSVKGSEKLASALSKPCTNAVNTGGLCLPPVPPC 257


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