BLASTX nr result
ID: Catharanthus23_contig00028840
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028840
(247 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EMJ24775.1| hypothetical protein PRUPE_ppa012300mg [Prunus pe... 89 6e-16
ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycin... 87 2e-15
ref|XP_004296442.1| PREDICTED: ribulose bisphosphate carboxylase... 87 2e-15
ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase... 87 2e-15
gb|AFK37376.1| unknown [Lotus japonicus] 87 3e-15
gb|AFK34410.1| unknown [Lotus japonicus] 87 3e-15
gb|EXB55399.1| hypothetical protein L484_016767 [Morus notabilis] 86 7e-15
ref|XP_003610096.1| Ribulose bisphosphate carboxylase small chai... 86 7e-15
ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chai... 84 2e-14
ref|XP_006856657.1| hypothetical protein AMTR_s00054p00039660 [A... 83 3e-14
gb|EOY31864.1| Ribulose bisphosphate carboxylase family protein ... 83 3e-14
ref|XP_006372084.1| hypothetical protein POPTR_0018s09880g [Popu... 83 4e-14
gb|ABK96070.1| unknown [Populus trichocarpa] 83 4e-14
ref|XP_006453353.1| hypothetical protein CICLE_v10009532mg [Citr... 82 6e-14
ref|XP_006453352.1| hypothetical protein CICLE_v10009532mg [Citr... 82 6e-14
ref|XP_006344531.1| PREDICTED: ribulose bisphosphate carboxylase... 82 7e-14
ref|XP_004243079.1| PREDICTED: ribulose bisphosphate carboxylase... 82 1e-13
ref|XP_006388513.1| hypothetical protein POPTR_0168s00220g [Popu... 80 3e-13
gb|ABK25403.1| unknown [Picea sitchensis] 76 5e-12
dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase ... 75 7e-12
>gb|EMJ24775.1| hypothetical protein PRUPE_ppa012300mg [Prunus persica]
Length = 175
Score = 89.0 bits (219), Expect = 6e-16
Identities = 39/46 (84%), Positives = 41/46 (89%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPH 140
WNPI NKKFETLSYLPPLSD+SIAKEIDYMLK WIPCLEFD + H
Sbjct: 51 WNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEIGH 96
>ref|NP_001235868.1| uncharacterized protein LOC100527679 [Glycine max]
gi|255632934|gb|ACU16821.1| unknown [Glycine max]
Length = 172
Score = 87.4 bits (215), Expect = 2e-15
Identities = 39/42 (92%), Positives = 39/42 (92%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFD 128
WNPI NKKFETLSYLPPLSDESIAKEIDYMLK WIPCLEFD
Sbjct: 51 WNPINNKKFETLSYLPPLSDESIAKEIDYMLKKGWIPCLEFD 92
>ref|XP_004296442.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 190
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVV 134
WNPI NKKFETLSYLPPLSD+SIAKEIDYMLK WIPCLEFD V
Sbjct: 67 WNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEV 110
>ref|XP_002270117.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic [Vitis vinifera]
gi|297735404|emb|CBI17844.3| unnamed protein product
[Vitis vinifera]
Length = 169
Score = 87.0 bits (214), Expect = 2e-15
Identities = 39/44 (88%), Positives = 40/44 (90%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVV 134
WNPI NKKFETLSYLPPLSD+SIAKEIDYMLK WIPCLEFD V
Sbjct: 51 WNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKGWIPCLEFDEV 94
>gb|AFK37376.1| unknown [Lotus japonicus]
Length = 173
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPH 140
WNPI N+KFETLSYLPPL+DESIAKE+DYMLK WIPCLEFD + H
Sbjct: 51 WNPINNRKFETLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGH 96
>gb|AFK34410.1| unknown [Lotus japonicus]
Length = 173
Score = 86.7 bits (213), Expect = 3e-15
Identities = 37/46 (80%), Positives = 41/46 (89%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPH 140
WNPI N+KFETLSYLPPL+DESIAKE+DYMLK WIPCLEFD + H
Sbjct: 51 WNPINNRKFETLSYLPPLTDESIAKEVDYMLKKGWIPCLEFDELGH 96
>gb|EXB55399.1| hypothetical protein L484_016767 [Morus notabilis]
Length = 176
Score = 85.5 bits (210), Expect = 7e-15
Identities = 38/48 (79%), Positives = 41/48 (85%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHTN 146
WNPI NK+FETLSYLPP SD+SIAKEIDYMLKN WIPCLEFD H +
Sbjct: 52 WNPINNKRFETLSYLPPPSDDSIAKEIDYMLKNGWIPCLEFDERGHVH 99
>ref|XP_003610096.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
gi|355511151|gb|AES92293.1| Ribulose bisphosphate
carboxylase small chain [Medicago truncatula]
Length = 98
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/47 (82%), Positives = 40/47 (85%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHT 143
WNPI NKKFETLSYLPPLSD+SIAKEIDYMLK W PCLEFD V T
Sbjct: 52 WNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKRWTPCLEFDEVRST 98
>ref|XP_003610095.1| Ribulose bisphosphate carboxylase small chain [Medicago truncatula]
gi|355511150|gb|AES92292.1| Ribulose bisphosphate
carboxylase small chain [Medicago truncatula]
gi|388491552|gb|AFK33842.1| unknown [Medicago
truncatula]
Length = 173
Score = 84.0 bits (206), Expect = 2e-14
Identities = 37/42 (88%), Positives = 38/42 (90%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFD 128
WNPI NKKFETLSYLPPLSD+SIAKEIDYMLK W PCLEFD
Sbjct: 52 WNPINNKKFETLSYLPPLSDDSIAKEIDYMLKKRWTPCLEFD 93
>ref|XP_006856657.1| hypothetical protein AMTR_s00054p00039660 [Amborella trichopoda]
gi|548860557|gb|ERN18124.1| hypothetical protein
AMTR_s00054p00039660 [Amborella trichopoda]
Length = 169
Score = 83.2 bits (204), Expect = 3e-14
Identities = 37/48 (77%), Positives = 41/48 (85%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHTN 146
WNPI+NKKFETLSYLPPLSDESIAKEIDYM+ WIP LEFD V + +
Sbjct: 51 WNPISNKKFETLSYLPPLSDESIAKEIDYMISKGWIPSLEFDEVGYVS 98
>gb|EOY31864.1| Ribulose bisphosphate carboxylase family protein [Theobroma cacao]
Length = 248
Score = 83.2 bits (204), Expect = 3e-14
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVV 134
WNP NKKFETLSYLPPLSD+SIAKEI+YM+K WIPCLEFD V
Sbjct: 132 WNPFNNKKFETLSYLPPLSDDSIAKEIEYMMKKGWIPCLEFDEV 175
>ref|XP_006372084.1| hypothetical protein POPTR_0018s09880g [Populus trichocarpa]
gi|550318425|gb|ERP49881.1| hypothetical protein
POPTR_0018s09880g [Populus trichocarpa]
Length = 231
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVV 134
WNPI NKKFE LSYLPPLS++SIAKEIDYM+K WIPCLEFD V
Sbjct: 53 WNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEV 96
>gb|ABK96070.1| unknown [Populus trichocarpa]
Length = 170
Score = 82.8 bits (203), Expect = 4e-14
Identities = 36/44 (81%), Positives = 39/44 (88%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVV 134
WNPI NKKFE LSYLPPLS++SIAKEIDYM+K WIPCLEFD V
Sbjct: 53 WNPINNKKFEALSYLPPLSEDSIAKEIDYMMKKGWIPCLEFDEV 96
>ref|XP_006453353.1| hypothetical protein CICLE_v10009532mg [Citrus clementina]
gi|567922696|ref|XP_006453354.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
gi|557556579|gb|ESR66593.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
gi|557556580|gb|ESR66594.1| hypothetical protein
CICLE_v10009532mg [Citrus clementina]
Length = 172
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHTN 146
WNPI NKKFE LSYLP LSD+SIAKEIDYMLK WIPCLEFD V + +
Sbjct: 51 WNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVH 98
>ref|XP_006453352.1| hypothetical protein CICLE_v10009532mg [Citrus clementina]
gi|568840482|ref|XP_006474196.1| PREDICTED: ribulose
bisphosphate carboxylase small chain, chloroplastic-like
[Citrus sinensis] gi|557556578|gb|ESR66592.1|
hypothetical protein CICLE_v10009532mg [Citrus
clementina]
Length = 201
Score = 82.4 bits (202), Expect = 6e-14
Identities = 37/48 (77%), Positives = 40/48 (83%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHTN 146
WNPI NKKFE LSYLP LSD+SIAKEIDYMLK WIPCLEFD V + +
Sbjct: 80 WNPINNKKFEALSYLPSLSDDSIAKEIDYMLKKGWIPCLEFDEVGYVH 127
>ref|XP_006344531.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Solanum tuberosum]
Length = 169
Score = 82.0 bits (201), Expect = 7e-14
Identities = 35/48 (72%), Positives = 40/48 (83%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHTN 146
WNPI NKKFETLSYLPP S+ESI KE+DYM+K WIPCLEFD V + +
Sbjct: 52 WNPIDNKKFETLSYLPPQSEESIGKEVDYMIKKGWIPCLEFDQVGYVH 99
>ref|XP_004243079.1| PREDICTED: ribulose bisphosphate carboxylase small chain,
chloroplastic-like [Solanum lycopersicum]
Length = 169
Score = 81.6 bits (200), Expect = 1e-13
Identities = 34/48 (70%), Positives = 41/48 (85%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVVPHTN 146
WNPI NKKFETLSYLPP S+ESIAKE+DY++K W+PCLEFD V + +
Sbjct: 52 WNPIDNKKFETLSYLPPQSEESIAKEVDYIIKKGWVPCLEFDQVGYVH 99
>ref|XP_006388513.1| hypothetical protein POPTR_0168s00220g [Populus trichocarpa]
gi|550310300|gb|ERP47427.1| hypothetical protein
POPTR_0168s00220g [Populus trichocarpa]
Length = 129
Score = 80.1 bits (196), Expect = 3e-13
Identities = 35/42 (83%), Positives = 37/42 (88%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFD 128
WNPI NKKFE LSYL PLSD+SIAKEIDYM+K WIPCLEFD
Sbjct: 43 WNPINNKKFEALSYLTPLSDDSIAKEIDYMVKKGWIPCLEFD 84
>gb|ABK25403.1| unknown [Picea sitchensis]
Length = 188
Score = 75.9 bits (185), Expect = 5e-12
Identities = 31/44 (70%), Positives = 36/44 (81%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDVV 134
W PI N+K+ETLSYLPPLS ES+ KEIDYM+ W+PCLEFD V
Sbjct: 68 WPPINNRKYETLSYLPPLSQESLVKEIDYMISKGWVPCLEFDAV 111
>dbj|BAI53120.1| ribulose-1,5-bisphosphate carboxylase/oxygenase small subunit
[Eucalyptus globulus]
Length = 179
Score = 75.5 bits (184), Expect = 7e-12
Identities = 30/43 (69%), Positives = 38/43 (88%)
Frame = +3
Query: 3 WNPIANKKFETLSYLPPLSDESIAKEIDYMLKNAWIPCLEFDV 131
W PI KKFETLSYLPPLS ES+AKE+DY+L++ W+PCLEF++
Sbjct: 60 WPPIGKKKFETLSYLPPLSPESLAKEVDYLLRSGWVPCLEFEL 102