BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028830
         (869 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]              180   1e-66
gb|AAM15062.1| putative retroelement integrase [Arabidopsis thal...   169   1e-63
gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]     169   2e-60
emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]   150   8e-60
ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594...   161   9e-58
gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subc...   160   7e-57
gb|AAD17351.1| contains similarity to retrovirus-related polypro...   176   3e-56
gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Ja...   148   2e-52
gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subc...   148   2e-52
gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Jap...   148   2e-52
emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]   122   2e-51
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]                 158   4e-51
ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662...   164   5e-51
gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus pe...   148   8e-50
gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus pe...   150   4e-49
gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]                  164   7e-49
gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thali...   142   9e-49
gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]                  162   3e-48
gb|AAM94350.1| gag-pol polyprotein [Zea mays]                         165   3e-48
gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum...   164   3e-48

>gb|AAF79348.1|AC007887_7 F15O4.13 [Arabidopsis thaliana]
          Length = 1887

 Score =  180 bits (456), Expect(4) = 1e-66
 Identities = 97/144 (67%), Positives = 112/144 (77%), Gaps = 2/144 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF+ LA FY+RF+KDFS  A+PL EVIKK  GF + +AQE AF+ALKE L +A +L+LP
Sbjct: 1141 RSFHGLAGFYRRFVKDFSTLAAPLTEVIKKNVGFKWEQAQEDAFQALKEKLTHAPVLSLP 1200

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F K FEIE DASGVGIG VLMQDK+ I Y SEKL GA L+Y TYDKELY LV  L+  Q
Sbjct: 1201 DFLKTFEIECDASGVGIGVVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTGQ 1260

Query: 527  HYLWSKEFVIHTDPEFLKYLKGLQ 598
            HYLW KEFVIHTD E LK+LKG Q
Sbjct: 1261 HYLWPKEFVIHTDHESLKHLKGQQ 1284



 Score = 63.2 bits (152), Expect(4) = 1e-66
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK L+G  KL+KRHA W+EFIETFPY+I YKKGK+N++A
Sbjct: 1277 LKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVA 1315



 Score = 40.8 bits (94), Expect(4) = 1e-66
 Identities = 17/37 (45%), Positives = 25/37 (67%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y   +SL   LLGF+ +K LY +D DF  I+++C
Sbjct: 1319 SRRYVLLSSLDAKLLGFEHIKSLYANDSDFEKIYSSC 1355



 Score = 38.5 bits (88), Expect(4) = 1e-66
 Identities = 19/43 (44%), Positives = 28/43 (65%)
 Frame = +3

Query: 45   RKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
            +K  F  + + FLG  VS++G++VD +KVK I + P PK V E
Sbjct: 1097 KKCTFGTDNLVFLGFVVSTDGVKVDEEKVKAIREWPSPKSVGE 1139


>gb|AAM15062.1| putative retroelement integrase [Arabidopsis thaliana]
          Length = 1215

 Score =  169 bits (429), Expect(4) = 1e-63
 Identities = 90/144 (62%), Positives = 107/144 (74%), Gaps = 2/144 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFSA--SPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF+ LA FY+RF KDFS   +PL EV+KK  GF + +AQE AF++LK+ L NA +L L 
Sbjct: 650  RSFHGLAGFYRRFFKDFSTIVAPLTEVMKKDVGFKWEKAQEEAFQSLKDKLTNAPVLILS 709

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
             F K FEIE DASG+GIG VLMQD++LI + SEKL GA L+Y TYDKELY LV  L+  Q
Sbjct: 710  EFLKTFEIECDASGIGIGAVLMQDQKLIAFFSEKLGGATLNYPTYDKELYALVRALQRWQ 769

Query: 527  HYLWSKEFVIHTDPEFLKYLKGLQ 598
            HYLW K FVIHTD E LK+LKG Q
Sbjct: 770  HYLWPKVFVIHTDHESLKHLKGQQ 793



 Score = 60.1 bits (144), Expect(4) = 1e-63
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
           LK L+G  KL+KRHA W+EFIETF Y+I YKKGK+N++A
Sbjct: 786 LKHLKGQQKLNKRHARWVEFIETFAYVIKYKKGKDNVVA 824



 Score = 43.9 bits (102), Expect(4) = 1e-63
 Identities = 21/43 (48%), Positives = 29/43 (67%)
 Frame = +3

Query: 45  RKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           +K  FC + + FLG  VS++G++VD +KVK I D P PK V E
Sbjct: 606 KKCTFCTDNLVFLGFVVSADGVKVDEEKVKAIRDWPSPKTVGE 648



 Score = 38.9 bits (89), Expect(4) = 1e-63
 Identities = 13/37 (35%), Positives = 27/37 (72%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
           S++Y+  ++L + L+GF+ +K++Y +D DF  ++ AC
Sbjct: 828 SQRYTLLSTLNVKLMGFEQIKEVYETDHDFQEVYKAC 864


>gb|AAQ72731.1| putative reverse transcriptase [Petunia x hybrida]
          Length = 435

 Score =  169 bits (428), Expect(4) = 2e-60
 Identities = 88/142 (61%), Positives = 106/142 (74%), Gaps = 2/142 (1%)
 Frame = +2

Query: 173 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
           RSF+ LASFY+RF+KDFS  A+PL E++KK   F +GE QE AF+ LK  L  A LL LP
Sbjct: 110 RSFHGLASFYRRFVKDFSSKAAPLTELVKKDQPFVWGEPQEKAFQELKGRLSTAPLLQLP 169

Query: 347 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
           +F K FE+E DASGVGIGGVLMQD + I Y SEKL GA L+Y+TYDKE+Y LV  L H Q
Sbjct: 170 DFGKAFEVECDASGVGIGGVLMQDSKPIAYFSEKLKGASLNYSTYDKEVYALVRALAHWQ 229

Query: 527 HYLWSKEFVIHTDPEFLKYLKG 592
           HYLW +EF I +D E LK+L+G
Sbjct: 230 HYLWPREFEIKSDHESLKHLRG 251



 Score = 61.6 bits (148), Expect(4) = 2e-60
 Identities = 26/39 (66%), Positives = 33/39 (84%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
           LK L G  KL+KRHA W+EFIE+FPY+I YKKGK+N++A
Sbjct: 246 LKHLRGQEKLNKRHAKWVEFIESFPYVIQYKKGKDNVVA 284



 Score = 42.7 bits (99), Expect(4) = 2e-60
 Identities = 23/53 (43%), Positives = 33/53 (62%)
 Frame = +3

Query: 42  FRKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 200
           F+K  F ++K+ FLG  VS++G++VD  KV+ I D P P  VT+  S   L S
Sbjct: 65  FKKCAFGVDKVVFLGFVVSAQGVEVDESKVEAIRDWPTPTTVTQVRSFHGLAS 117



 Score = 28.1 bits (61), Expect(4) = 2e-60
 Identities = 12/36 (33%), Positives = 23/36 (63%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNA 797
           SRK++  T+L   L+GF+++K +Y  D    ++ +A
Sbjct: 288 SRKFALATTLTSKLMGFESIKLMYAHDPMLKTVHDA 323


>emb|CAN68499.1| hypothetical protein VITISV_041099 [Vitis vinifera]
          Length = 1115

 Score =  150 bits (379), Expect(4) = 8e-60
 Identities = 81/140 (57%), Positives = 93/140 (66%)
 Frame = +2

Query: 173 RSFYVLASFYQRFIKDFSASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLPNF 352
           RSF+ LASFY RF+KDFS+                  Q+ AF  +KE LC A LL LP+F
Sbjct: 615 RSFHXLASFYLRFVKDFSSE-----------------QDRAFIEIKERLCGAPLLALPDF 657

Query: 353 DKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*QHY 532
            K FEIE DASG+GIGGVLM +K  I Y SEKL+   L+Y TYDKELY LV  L+  QHY
Sbjct: 658 SKTFEIECDASGIGIGGVLMXEKXXITYFSEKLNXTTLNYPTYDKELYALVRALETWQHY 717

Query: 533 LWSKEFVIHTDPEFLKYLKG 592
           LW KEFVIHTD E LK+LKG
Sbjct: 718 LWPKEFVIHTDHESLKHLKG 737



 Score = 57.8 bits (138), Expect(4) = 8e-60
 Identities = 25/38 (65%), Positives = 32/38 (84%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIM 687
           LK L+G  KL++ HA W+EFIETFPY+I YK+GKENI+
Sbjct: 732 LKHLKGQGKLNRXHAKWVEFIETFPYVIKYKQGKENIV 769



 Score = 48.5 bits (114), Expect(4) = 8e-60
 Identities = 23/52 (44%), Positives = 34/52 (65%)
 Frame = +3

Query: 45  RKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 200
           +K  FC++K+ FLG  VS++G+ VD +K K I++ P PK +TE  S   L S
Sbjct: 571 KKCSFCMDKVVFLGYVVSAKGIXVDXEKXKAIKEWPTPKXITEVRSFHXLAS 622



 Score = 43.1 bits (100), Expect(4) = 8e-60
 Identities = 17/37 (45%), Positives = 27/37 (72%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
           SR+Y+  ++L   LLGF+ +K+LY +D DF S++ AC
Sbjct: 774 SRRYALVSTLNAKLLGFEYVKELYANDDDFSSVYGAC 810


>ref|XP_006366953.1| PREDICTED: uncharacterized protein LOC102594328 [Solanum tuberosum]
          Length = 1191

 Score =  161 bits (408), Expect(4) = 9e-58
 Identities = 86/141 (60%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF+ LASFY+RF++DFS  A+PL EVIKK   F +G+ Q+ AF  LK+ LC+A LL L 
Sbjct: 660  RSFHRLASFYRRFVRDFSTIAAPLTEVIKKDKVFTWGKEQDDAFNLLKDKLCSAPLLQLL 719

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F K FE+E DASG GIG VLM D + I Y SEK SGA L+Y TYDKELY LV  L   Q
Sbjct: 720  DFSKSFEVECDASGKGIGAVLMPDSKPIAYFSEKPSGATLNYLTYDKELYALVRALATWQ 779

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW +EFV+ TD E LKYLK
Sbjct: 780  HYLWPREFVVKTDHESLKYLK 800



 Score = 58.9 bits (141), Expect(4) = 9e-58
 Identities = 25/39 (64%), Positives = 32/39 (82%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
           LK L+   KL +RHA W+EFIETFPY+I YK+GKEN++A
Sbjct: 796 LKYLKSQGKLSRRHAKWVEFIETFPYVIAYKQGKENVVA 834



 Score = 39.7 bits (91), Expect(4) = 9e-58
 Identities = 18/37 (48%), Positives = 23/37 (62%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
           SR+Y   ++L   LLGF  +K LY +D DFG IF  C
Sbjct: 838 SRRYVLISTLTSKLLGFDQIKFLYANDSDFGEIFAEC 874



 Score = 32.7 bits (73), Expect(4) = 9e-58
 Identities = 17/36 (47%), Positives = 24/36 (66%)
 Frame = +3

Query: 93  VSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 200
           VSS+G++VD +K+K I++ P P  VTE  S   L S
Sbjct: 632 VSSKGVEVDDEKIKAIKEWPKPNSVTEVRSFHRLAS 667


>gb|ABA98082.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 817

 Score =  160 bits (404), Expect(4) = 7e-57
 Identities = 81/141 (57%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
           RSF  LA FY+RF++DFS  A+PL  + KK   F +G +QE AF  LK+ L +A LL LP
Sbjct: 282 RSFLGLAGFYRRFVQDFSTIAAPLNALTKKVVPFTWGTSQENAFHMLKDKLTHAPLLQLP 341

Query: 347 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
           NF+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG +L+Y+TYDKELY LV TL+  Q
Sbjct: 342 NFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPVLNYSTYDKELYALVRTLETWQ 401

Query: 527 HYLWSKEFVIHTDPEFLKYLK 589
           HYLW K+FVIH+D E LK+++
Sbjct: 402 HYLWPKKFVIHSDHESLKHIR 422



 Score = 56.6 bits (135), Expect(4) = 7e-57
 Identities = 24/40 (60%), Positives = 33/40 (82%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMAH 693
           LK +    KL++RHA W+EFIE+FPY+I +KKGKENI+A+
Sbjct: 418 LKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIAN 457



 Score = 36.6 bits (83), Expect(4) = 7e-57
 Identities = 16/42 (38%), Positives = 28/42 (66%)
 Frame = +3

Query: 48  KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           K  FC ++++FL   V+ +G++VD  KV+ I+  P PK V++
Sbjct: 239 KCTFCTDRVSFLDYVVTPQGIEVDQAKVEAIQSWPTPKTVSQ 280



 Score = 36.6 bits (83), Expect(4) = 7e-57
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
           SR+Y+  T L   + G +T+KD Y  D DF  +   C
Sbjct: 460 SRRYTLLTQLDYKIFGLETIKDQYAHDADFNDVLLHC 496


>gb|AAD17351.1| contains similarity to retrovirus-related polyproteins and to CCHC
           zinc finger protein (Pfam: PF00098, Score=16.3, E=0.051,
           E= 1) [Arabidopsis thaliana] gi|7267432|emb|CAB77944.1|
           putative polyprotein [Arabidopsis thaliana]
          Length = 1138

 Score =  176 bits (445), Expect(3) = 3e-56
 Identities = 94/144 (65%), Positives = 110/144 (76%), Gaps = 2/144 (1%)
 Frame = +2

Query: 173 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
           RSF+ LA FY+RF++DFS  A+PL EVIKK  GF + +A E AF+ALKE L +A +L+LP
Sbjct: 560 RSFHGLAGFYRRFVRDFSTLAAPLTEVIKKNVGFKWEQAPEDAFQALKEKLTHAPVLSLP 619

Query: 347 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
           +F K FEIE DA GVGIG VLMQDK+ I Y SEKL GA L+Y TYDKELY LV  L+  Q
Sbjct: 620 DFLKTFEIECDAPGVGIGAVLMQDKKPIAYFSEKLGGATLNYPTYDKELYALVRALQTWQ 679

Query: 527 HYLWSKEFVIHTDPEFLKYLKGLQ 598
           HYLW KEFVIHTD E LK+LKG Q
Sbjct: 680 HYLWPKEFVIHTDHESLKHLKGQQ 703



 Score = 63.2 bits (152), Expect(3) = 3e-56
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
           LK L+G  KL+KRHA W+EFIETFPY+I YKKGK+N++A
Sbjct: 696 LKHLKGQQKLNKRHARWVEFIETFPYVIKYKKGKDNVVA 734



 Score = 28.1 bits (61), Expect(3) = 3e-56
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 96  SSEGLQVDLDKVKPIED*PMPKGV 167
           S++G++VD +KVK I + P PK V
Sbjct: 533 STDGVKVDEEKVKAIREWPSPKSV 556


>gb|AAM74438.1|AC123594_21 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1450

 Score =  148 bits (373), Expect(4) = 2e-52
 Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF  +A FY+RF+KDFS  A+PL E+ K+   F +  AQ   F  LK+ L +A L  LP
Sbjct: 884  RSFLGVAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAVAQRNTFDTLKDKLTHAPLFQLP 943

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG  L+Y+TYDK+L+ LV TL+  Q
Sbjct: 944  DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKKLFALVQTLETWQ 1003

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVI +D E LK+++
Sbjct: 1004 HYLWPKEFVIRSDHESLKHIR 1024



 Score = 55.5 bits (132), Expect(4) = 2e-52
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK +    KL+ RHA W+EFIE+FPY+I +KKGKEN++A
Sbjct: 1020 LKHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIA 1058



 Score = 39.3 bits (90), Expect(4) = 2e-52
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +3

Query: 48  KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           K  FC+++++FLG  V+ +G++VD  KV+ I   P+P  +T+
Sbjct: 841 KCTFCIDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQ 882



 Score = 32.0 bits (71), Expect(4) = 2e-52
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+  + L   + G +T+K+ Y  D DF  +   C
Sbjct: 1062 SRRYTMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNC 1098


>gb|ABB47285.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1392

 Score =  148 bits (373), Expect(4) = 2e-52
 Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF  +A FY+RF+KDFS  A+PL E+ K+   F +  AQ   F  LK+ L +A L  LP
Sbjct: 826  RSFLGVAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAVAQRNTFDTLKDKLTHAPLFQLP 885

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG  L+Y+TYDK+L+ LV TL+  Q
Sbjct: 886  DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKKLFALVQTLETWQ 945

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVI +D E LK+++
Sbjct: 946  HYLWPKEFVIRSDHESLKHIR 966



 Score = 55.5 bits (132), Expect(4) = 2e-52
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK +    KL+ RHA W+EFIE+FPY+I +KKGKEN++A
Sbjct: 962  LKHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIA 1000



 Score = 39.3 bits (90), Expect(4) = 2e-52
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +3

Query: 48  KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           K  FC+++++FLG  V+ +G++VD  KV+ I   P+P  +T+
Sbjct: 783 KCTFCIDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQ 824



 Score = 32.0 bits (71), Expect(4) = 2e-52
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+  + L   + G +T+K+ Y  D DF  +   C
Sbjct: 1004 SRRYTMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNC 1040


>gb|AAM08551.1|AC092749_4 Putative retroelement [Oryza sativa Japonica Group]
          Length = 1357

 Score =  148 bits (373), Expect(4) = 2e-52
 Identities = 75/141 (53%), Positives = 102/141 (72%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF  +A FY+RF+KDFS  A+PL E+ K+   F +  AQ   F  LK+ L +A L  LP
Sbjct: 791  RSFLGVAGFYRRFVKDFSTIAAPLHELTKRNVTFTWAVAQRNTFDTLKDKLTHAPLFQLP 850

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG  L+Y+TYDK+L+ LV TL+  Q
Sbjct: 851  DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGPSLNYSTYDKKLFALVQTLETWQ 910

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVI +D E LK+++
Sbjct: 911  HYLWPKEFVIRSDHESLKHIR 931



 Score = 55.5 bits (132), Expect(4) = 2e-52
 Identities = 23/39 (58%), Positives = 31/39 (79%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK +    KL+ RHA W+EFIE+FPY+I +KKGKEN++A
Sbjct: 927  LKHIRSQAKLNHRHAKWVEFIESFPYVIKHKKGKENVIA 965



 Score = 39.3 bits (90), Expect(4) = 2e-52
 Identities = 16/42 (38%), Positives = 29/42 (69%)
 Frame = +3

Query: 48  KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           K  FC+++++FLG  V+ +G++VD  KV+ I   P+P  +T+
Sbjct: 748 KCTFCIDRVSFLGYVVTPQGIEVDQAKVEAIHSWPVPTTITQ 789



 Score = 32.0 bits (71), Expect(4) = 2e-52
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+  + L   + G +T+K+ Y  D DF  +   C
Sbjct: 969  SRRYTMLSQLDFKIFGLETIKEQYAHDDDFKDVLLNC 1005


>emb|CAN71870.1| hypothetical protein VITISV_044169 [Vitis vinifera]
          Length = 750

 Score =  122 bits (307), Expect(4) = 2e-51
 Identities = 73/142 (51%), Positives = 88/142 (61%), Gaps = 2/142 (1%)
 Frame = +2

Query: 173 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
           RSF+ LASFY++F+KDFS  A+ + E++KK  GF                LC A LL LP
Sbjct: 286 RSFHGLASFYRQFVKDFSTLAALVTEIVKKFVGFK---------------LCGAPLLALP 330

Query: 347 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
           +F K FEIE DAS          +K+ I Y SEKL+GA L+Y  YDKELY LV  L+  Q
Sbjct: 331 DFSKTFEIECDAS----------EKQPIAYFSEKLNGAALNYPKYDKELYALVRALETWQ 380

Query: 527 HYLWSKEFVIHTDPEFLKYLKG 592
           HYLW KEFVIH D E LK+LKG
Sbjct: 381 HYLWPKEFVIHADHESLKHLKG 402



 Score = 61.6 bits (148), Expect(4) = 2e-51
 Identities = 27/39 (69%), Positives = 34/39 (87%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
           LK L+G  KL++RHA W+EFIETFPY+I YK+GKENI+A
Sbjct: 397 LKHLKGQGKLNRRHAKWVEFIETFPYVIKYKQGKENIVA 435



 Score = 50.1 bits (118), Expect(4) = 2e-51
 Identities = 24/57 (42%), Positives = 36/57 (63%)
 Frame = +3

Query: 30  IRCQFRKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 200
           + C   K  FC++K+ FLG  VS++G++VD +KVK I++ P P  +TE  S   L S
Sbjct: 237 LHCVLIKCSFCMDKVVFLGYVVSAKGIEVDEEKVKAIKEWPTPMSITEVRSFHGLAS 293



 Score = 37.0 bits (84), Expect(4) = 2e-51
 Identities = 14/36 (38%), Positives = 26/36 (72%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNA 797
           SR+Y+  ++L   LLGF+ +++LY +D DF +++ A
Sbjct: 439 SRRYALVSTLNAKLLGFEYVEELYANDDDFANVYGA 474


>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
          Length = 1475

 Score =  158 bits (399), Expect(4) = 4e-51
 Identities = 79/142 (55%), Positives = 104/142 (73%), Gaps = 2/142 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFSA--SPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF+ LASFY+RFIKDFS   +P+ E +KK   F +G+  E +F  +KE LC + +LTLP
Sbjct: 835  RSFHGLASFYRRFIKDFSTLMAPITECMKKGE-FKWGDKAESSFNIIKEKLCESPILTLP 893

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            NF+K+FE+E DASG+GIG VL+Q+ + I Y SEKLSGA L+Y+TYDKE Y +V  L H  
Sbjct: 894  NFNKLFEVECDASGIGIGAVLVQEHKPIAYFSEKLSGAKLNYSTYDKEFYAIVRALNHWS 953

Query: 527  HYLWSKEFVIHTDPEFLKYLKG 592
            HYL  + FV+H+D E LKY+ G
Sbjct: 954  HYLKPRPFVLHSDHEALKYING 975



 Score = 43.1 bits (100), Expect(4) = 4e-51
 Identities = 18/39 (46%), Positives = 28/39 (71%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK + G  KL+ RHA W+EF+++F +   Y +GK+NI+A
Sbjct: 970  LKYINGQHKLNHRHAKWVEFLQSFNFSSKYIEGKDNIVA 1008



 Score = 38.9 bits (89), Expect(4) = 4e-51
 Identities = 20/54 (37%), Positives = 30/54 (55%)
 Frame = +3

Query: 39  QFRKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTEEVSMCWLVS 200
           +  K  F   ++ FLG  +S  G+ VD +KVK I+  P+PK +T+  S   L S
Sbjct: 789 KLEKCSFMQNEVQFLGFIISDRGILVDQEKVKAIKSWPIPKNITDVRSFHGLAS 842



 Score = 30.0 bits (66), Expect(4) = 4e-51
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDF 779
            SR++   + ++  +LGF+ +K+LY  D DF
Sbjct: 1012 SRRFIMLSFMEQRVLGFEYMKELYVEDPDF 1041


>ref|XP_006606762.1| PREDICTED: uncharacterized protein LOC102662828 [Glycine max]
          Length = 612

 Score =  164 bits (414), Expect(3) = 5e-51
 Identities = 86/142 (60%), Positives = 103/142 (72%), Gaps = 2/142 (1%)
 Frame = +2

Query: 173 RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
           R F+ LASFY+RF+KDFS  A+PL E++KK  GF +G+ QE AF ALK  L NA +L +P
Sbjct: 112 RGFHGLASFYRRFVKDFSTLAAPLTEIVKKNVGFKWGKKQEEAFAALKHRLTNAPILAMP 171

Query: 347 NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
           NF K FEIE D S VGIG VL+Q+   I Y SEKL  A L+Y+TYDK+LY LV  L+  Q
Sbjct: 172 NFAKSFEIECDVSNVGIGAVLLQEGHPIAYFSEKLGAAALNYSTYDKKLYALVRALQTWQ 231

Query: 527 HYLWSKEFVIHTDPEFLKYLKG 592
           HYL  KEFVIH+D E LKYLKG
Sbjct: 232 HYLLPKEFVIHSDHESLKYLKG 253



 Score = 44.3 bits (103), Expect(3) = 5e-51
 Identities = 20/42 (47%), Positives = 30/42 (71%)
 Frame = +3

Query: 48  KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           K  FC + + FLG  VS EG++VD++KVK I++ P PK ++E
Sbjct: 69  KCSFCTDHVVFLGFVVSVEGVRVDVEKVKAIQEWPTPKTLSE 110



 Score = 41.6 bits (96), Expect(3) = 5e-51
 Identities = 17/37 (45%), Positives = 24/37 (64%)
 Frame = +3

Query: 690 SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
           SR+++    L+  L G ++LKD+Y  DVDF  IF AC
Sbjct: 290 SRRHALLAMLETKLFGLESLKDMYVHDVDFAEIFAAC 326



 Score = 57.8 bits (138), Expect = 5e-06
 Identities = 30/51 (58%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
 Frame = +1

Query: 541 EGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
           E V HS H S  LK L+G  KL+KRHA W+EF+E FPY+I +KKGK N++A
Sbjct: 238 EFVIHSDHES--LKYLKGQGKLNKRHAKWVEFLEQFPYVIKHKKGKGNVVA 286


>gb|EMJ11389.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
          Length = 1485

 Score =  148 bits (373), Expect(4) = 8e-50
 Identities = 75/145 (51%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFSA--SPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF+ LA+FY+RF++ FS+  +P+ E +KK   F++GE QE +F  +KE LC A +L LP
Sbjct: 857  RSFHGLATFYRRFVRHFSSIVAPITECLKKGR-FSWGEEQERSFADIKEKLCTAPVLALP 915

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            NF+K+FE+E DASGVG+G VL QDKR + + SEKLS A   ++TYD+E Y +V  LK  +
Sbjct: 916  NFEKVFEVECDASGVGVGAVLSQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWE 975

Query: 527  HYLWSKEFVIHTDPEFLKYLKGLQN 601
            HYL  KEFV+ TD + LKY+   +N
Sbjct: 976  HYLIQKEFVLFTDHQALKYINSQKN 1000



 Score = 43.1 bits (100), Expect(4) = 8e-50
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +3

Query: 45  RKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           +K  FC  K+ FLG  V   G+QVD +K+K I D P PK V+E
Sbjct: 813 KKCTFCTNKLLFLGFVVGEHGIQVDDEKIKAILDWPAPKTVSE 855



 Score = 38.1 bits (87), Expect(4) = 8e-50
 Identities = 16/37 (43%), Positives = 23/37 (62%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+ S   +L   ++GF+ LK+LY  D DFG I+  C
Sbjct: 1034 SRRASLLITLTQEVVGFECLKELYEGDADFGEIWTKC 1070



 Score = 36.6 bits (83), Expect(4) = 8e-50
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK +     +DK HA W+ F++ F ++I +  GK N +A
Sbjct: 992  LKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVA 1030


>gb|EMJ08431.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
          Length = 1493

 Score =  150 bits (378), Expect(4) = 4e-49
 Identities = 76/145 (52%), Positives = 104/145 (71%), Gaps = 2/145 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF+ LA+FY RF++ FS  A+P+ E +KK   F++GE QE +F  +KE LC A +L LP
Sbjct: 865  RSFHGLATFYMRFVRHFSSIAAPITECLKKGR-FSWGEEQERSFADIKEKLCTAPVLALP 923

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            NF+K+FE+E DASGVG+G VL+QDKR + + SEKLS A   ++TYD+E Y +V  LK  +
Sbjct: 924  NFEKVFEVECDASGVGVGAVLLQDKRPVAFFSEKLSDARQKWSTYDQEFYAVVRALKQWE 983

Query: 527  HYLWSKEFVIHTDPEFLKYLKGLQN 601
            HYL  KEFV+ TD + LKY+   +N
Sbjct: 984  HYLIQKEFVLFTDHQALKYINSQKN 1008



 Score = 43.1 bits (100), Expect(4) = 4e-49
 Identities = 21/43 (48%), Positives = 27/43 (62%)
 Frame = +3

Query: 45  RKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
           +K  FC  K+ FLG  V   G+QVD +K+K I D P PK V+E
Sbjct: 821 KKCTFCTNKLLFLGFVVGENGIQVDDEKIKAILDWPAPKTVSE 863



 Score = 36.6 bits (83), Expect(4) = 4e-49
 Identities = 14/39 (35%), Positives = 23/39 (58%)
 Frame = +1

Query: 574  LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            LK +     +DK HA W+ F++ F ++I +  GK N +A
Sbjct: 1000 LKYINSQKNIDKMHARWVTFLQKFSFVIKHTSGKTNRVA 1038



 Score = 33.9 bits (76), Expect(4) = 4e-49
 Identities = 15/37 (40%), Positives = 22/37 (59%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+ S   +L   ++GF+ LK+LY  D DF  I+  C
Sbjct: 1042 SRRASLLITLTQEVVGFECLKELYEGDDDFREIWTKC 1078


>gb|AAK94517.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1717

 Score =  164 bits (416), Expect(3) = 7e-49
 Identities = 84/141 (59%), Positives = 108/141 (76%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF  LA FY+RF++DFS  A+PL E+ KK   +++G AQE AF  LK+ L +A LL LP
Sbjct: 1005 RSFLGLAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLLQLP 1064

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F+K FE+E DASG+G+GGVL+QD + + Y SEKLSG  L+Y+TYDKELY LV TL+  Q
Sbjct: 1065 DFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQ 1124

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVIH+D E LK++K
Sbjct: 1125 HYLWPKEFVIHSDHESLKHIK 1145



 Score = 42.0 bits (97), Expect(3) = 7e-49
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = +3

Query: 48   KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
            K  FC ++++FLG  V+ +G++VD  K++ IE  P PK VT+
Sbjct: 962  KCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQ 1003



 Score = 35.8 bits (81), Expect(3) = 7e-49
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+  + L   + G +T+KD Y  D DF  +   C
Sbjct: 1183 SRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENC 1219


>gb|AAD27902.1|AC006267_7 putative polyprotein [Arabidopsis thaliana]
            gi|7267450|emb|CAB81146.1| putative polyprotein
            [Arabidopsis thaliana]
          Length = 1054

 Score =  142 bits (358), Expect(3) = 9e-49
 Identities = 75/118 (63%), Positives = 87/118 (73%)
 Frame = +2

Query: 245  VIKKTNGFNYGEAQELAFKALKENLCNALLLTLPNFDKMFEIEYDASGVGIGGVLMQDKR 424
            V +K  GF + +AQE AF+ALKE L N+ +  LPNF K FEIE DASG+GIG VLMQD +
Sbjct: 699  VSEKDIGFKWEDAQENAFQALKEKLTNSSVPILPNFMKSFEIECDASGLGIGAVLMQDHK 758

Query: 425  LIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*QHYLWSKEFVIHTDPEFLKYLKGLQ 598
             I Y SEKL GA L+Y TYDKELY LV  L+  QHYLW K+FVIHTD E LK+LKG Q
Sbjct: 759  PIAYFSEKLGGATLNYPTYDKELYALVRALQTWQHYLWPKKFVIHTDHESLKHLKGQQ 816



 Score = 55.1 bits (131), Expect(3) = 9e-49
 Identities = 31/60 (51%), Positives = 38/60 (63%), Gaps = 3/60 (5%)
 Frame = +1

Query: 574 LKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKEN---IMAHENIHFSLLYSCICLGFK 744
           LK L+G  KL+KRHA W+EFIETFPY+I YKK + +   +M H    FS     I  GFK
Sbjct: 809 LKHLKGQQKLNKRHARWVEFIETFPYVIKYKKREAHGGGLMRHSATKFSPFE--IVYGFK 866



 Score = 44.7 bits (104), Expect(3) = 9e-49
 Identities = 20/44 (45%), Positives = 31/44 (70%)
 Frame = +3

Query: 45  RKSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTEE 176
           +K  FC + + FLG  VS++G++VD +KVK I + P PK V+E+
Sbjct: 659 KKCTFCTDNLVFLGFVVSADGIKVDEEKVKAIREWPNPKNVSEK 702


>gb|AAK94516.1| gag-pol polyprotein [Hordeum vulgare]
          Length = 1720

 Score =  162 bits (411), Expect(3) = 3e-48
 Identities = 83/141 (58%), Positives = 107/141 (75%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF   A FY+RF++DFS  A+PL E+ KK   +++G AQE AF  LK+ L +A LL LP
Sbjct: 1008 RSFLGXAGFYRRFVRDFSTIAAPLNELTKKDVPYSWGTAQEEAFTVLKDKLTHAPLLQLP 1067

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F+K FE+E DASG+G+GGVL+QD + + Y SEKLSG  L+Y+TYDKELY LV TL+  Q
Sbjct: 1068 DFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKLSGPSLNYSTYDKELYALVRTLETWQ 1127

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVIH+D E LK++K
Sbjct: 1128 HYLWPKEFVIHSDHESLKHIK 1148



 Score = 42.0 bits (97), Expect(3) = 3e-48
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = +3

Query: 48   KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
            K  FC ++++FLG  V+ +G++VD  K++ IE  P PK VT+
Sbjct: 965  KCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPQPKTVTQ 1006



 Score = 35.8 bits (81), Expect(3) = 3e-48
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+  + L   + G +T+KD Y  D DF  +   C
Sbjct: 1186 SRRYTMLSQLDFKIFGLETIKDQYVHDADFKDVLENC 1222



 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 30/55 (54%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +1

Query: 529  LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            L+  E V HS H S  LK ++   KL++RHA W+EFIETFPY+I +KKGK+N++A
Sbjct: 1130 LWPKEFVIHSDHES--LKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKDNVIA 1182


>gb|AAM94350.1| gag-pol polyprotein [Zea mays]
          Length = 1618

 Score =  165 bits (417), Expect(3) = 3e-48
 Identities = 83/141 (58%), Positives = 110/141 (78%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF  LA FY+RF+KDFS  A+PL E+ KK   F++G+ QE AF  LK+ L +A LL LP
Sbjct: 952  RSFLGLAGFYRRFVKDFSTIAAPLNELTKKGVHFSWGKVQEHAFNVLKDKLTHAPLLQLP 1011

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            +F+K FE+E DASG+G+GGVL+Q+ + + Y SEKLSG++L+Y+TYDKELY LV TL+  Q
Sbjct: 1012 DFNKTFELECDASGIGLGGVLLQEGKPVAYFSEKLSGSVLNYSTYDKELYALVRTLETWQ 1071

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVIH+D E LK+++
Sbjct: 1072 HYLWPKEFVIHSDHESLKHIR 1092



 Score = 41.6 bits (96), Expect(3) = 3e-48
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = +3

Query: 48   KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
            K  FC ++++FLG  V+ +G++VD  KV+ I   PMPK +T+
Sbjct: 909  KCTFCTDRVSFLGYVVTPQGIEVDQAKVEAIHGWPMPKTITQ 950



 Score = 33.9 bits (76), Expect(3) = 3e-48
 Identities = 13/37 (35%), Positives = 19/37 (51%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+    L   + G +T+KD Y  D DF  +   C
Sbjct: 1130 SRRYTLLNQLDYKIFGLETIKDQYVHDADFKDVLLHC 1166



 Score = 57.4 bits (137), Expect = 7e-06
 Identities = 31/55 (56%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
 Frame = +1

Query: 529  LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            L+  E V HS H S  LK +    KL++RHA W+EFIE+FPY+I +KKGKENI+A
Sbjct: 1074 LWPKEFVIHSDHES--LKHIRSQGKLNRRHAKWVEFIESFPYVIKHKKGKENIIA 1126


>gb|ABI96971.1| putative gag-pol polyprotein [Triticum monococcum subsp.
            aegilopoides]
          Length = 1704

 Score =  164 bits (416), Expect(3) = 3e-48
 Identities = 86/141 (60%), Positives = 105/141 (74%), Gaps = 2/141 (1%)
 Frame = +2

Query: 173  RSFYVLASFYQRFIKDFS--ASPLIEVIKKTNGFNYGEAQELAFKALKENLCNALLLTLP 346
            RSF  LA FY+RF++DFS  A+PL EV KK   F +G AQE AF  LK+ L  A LL LP
Sbjct: 993  RSFLGLAGFYRRFVRDFSTIAAPLNEVTKKDVPFVWGTAQEEAFTVLKDKLTYAPLLQLP 1052

Query: 347  NFDKMFEIEYDASGVGIGGVLMQDKRLIVYLSEKLSGAMLHYATYDKELYTLV*TLKH*Q 526
            NF+K FE+E DASG+G+GGVL+QD + + Y SEK SG  L+Y+TYDKELY LV TL+  Q
Sbjct: 1053 NFNKTFELECDASGIGLGGVLLQDGKPVAYFSEKFSGPSLNYSTYDKELYALVRTLETWQ 1112

Query: 527  HYLWSKEFVIHTDPEFLKYLK 589
            HYLW KEFVIH+D E LK++K
Sbjct: 1113 HYLWPKEFVIHSDHESLKHIK 1133



 Score = 41.2 bits (95), Expect(3) = 3e-48
 Identities = 18/42 (42%), Positives = 29/42 (69%)
 Frame = +3

Query: 48   KSEFCLEKITFLG*DVSSEGLQVDLDKVKPIED*PMPKGVTE 173
            K  FC ++++FLG  V+ +G++VD  K++ IE  P PK VT+
Sbjct: 950  KCTFCTDRVSFLGYVVTPQGIEVDKAKIEAIESWPHPKTVTQ 991



 Score = 34.3 bits (77), Expect(3) = 3e-48
 Identities = 12/37 (32%), Positives = 20/37 (54%)
 Frame = +3

Query: 690  SRKYSFFTSLQLHLLGFQTLKDLYTSDVDFGSIFNAC 800
            SR+Y+  + L   + G +T+KD Y  D +F  +   C
Sbjct: 1171 SRRYTMLSQLDFKIFGLETIKDQYVHDAEFKDVLQNC 1207



 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 1/55 (1%)
 Frame = +1

Query: 529  LFVVEGVCHS-HGS*VLKILEGSTKLDKRHAWWMEFIETFPYIIHYKKGKENIMA 690
            L+  E V HS H S  LK ++   KL++RHA W+EFIETFPY+I +KKGKEN++A
Sbjct: 1115 LWPKEFVIHSDHES--LKHIKSQAKLNRRHAKWVEFIETFPYVIKHKKGKENVIA 1167