BLASTX nr result

ID: Catharanthus23_contig00028811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028811
         (341 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAB09574.1| unnamed protein product [Arabidopsis thaliana]         71   2e-10
emb|CBI17461.3| unnamed protein product [Vitis vinifera]               63   5e-08

>dbj|BAB09574.1| unnamed protein product [Arabidopsis thaliana]
          Length = 351

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 44/73 (60%), Positives = 53/73 (72%), Gaps = 2/73 (2%)
 Frame = +3

Query: 3   VTL*GSLKFIDGRAIVKFCGVERIIIFTTNNKDKLDPALL--SRAEELMKSEDAADISLE 176
           +TL G L  IDG  +   CG ERI+IFTTNNK+ LDPALL    AEELMK+ED AD++LE
Sbjct: 236 LTLSGLLNCIDG--LWSSCGDERIVIFTTNNKEVLDPALLRPGFAEELMKNED-ADMALE 292

Query: 177 GLVQFLKNKKIHS 215
           GLV+ LK K+  S
Sbjct: 293 GLVKVLKRKRSES 305


>emb|CBI17461.3| unnamed protein product [Vitis vinifera]
          Length = 853

 Score = 62.8 bits (151), Expect = 5e-08
 Identities = 40/70 (57%), Positives = 49/70 (70%), Gaps = 2/70 (2%)
 Frame = +3

Query: 3   VTL*GSLKFIDGRAIVKFCGVERIIIFTTNNKDKLDPALL--SRAEELMKSEDAADISLE 176
           VTL G L FIDG  +   CG ERIIIFTTN+KDKLDPALL    AE L++S D  + +L 
Sbjct: 317 VTLSGLLNFIDG--LWSSCGDERIIIFTTNHKDKLDPALLRPGLAEHLLQS-DEPEKALR 373

Query: 177 GLVQFLKNKK 206
            L++FL+ KK
Sbjct: 374 DLIKFLEVKK 383


Top