BLASTX nr result

ID: Catharanthus23_contig00028792 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028792
         (770 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]    45   5e-06

>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
          Length = 1316

 Score = 45.4 bits (106), Expect(2) = 5e-06
 Identities = 18/44 (40%), Positives = 30/44 (68%)
 Frame = +1

Query: 637 LNIDDVLFIPKLRCNLLSLSQLSKENNYVIIINDGVLIL*DRIS 768
           L + +VL++P L+CNL+S+ QL KE +Y++   D   ++ DR S
Sbjct: 310 LCLKNVLYVPSLKCNLISIGQLLKEKDYIVTFTDSFCVIQDRTS 353



 Score = 31.6 bits (70), Expect(2) = 5e-06
 Identities = 28/97 (28%), Positives = 42/97 (43%)
 Frame = +2

Query: 245 RGAELYSPGRGSSRRVADLHHSVKQERLAGAATTSSDDTPRSVSIPGLSPAQWTSFLNLL 424
           RG   Y+ GRG++       ++V +            D  R++ IPGL+   +   + LL
Sbjct: 183 RGRNSYA-GRGATSGRVHYXNAVAEADTQEKGQCVGHDVERNI-IPGLNDDNFQKLMALL 240

Query: 425 NKQNXXXXXXXXXXXXKIEKDCILDSEHSHHMKDRRD 535
             +N            KI ++ ILDS  S HM  RRD
Sbjct: 241 --RNGSSNAEKLTGKNKIVEEWILDSGASMHMTGRRD 275


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