BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028733
         (314 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267810.2| PREDICTED: pentatricopeptide repeat-containi...   127   2e-27
ref|XP_006377070.1| hypothetical protein POPTR_0012s13270g [Popu...   111   1e-22
ref|XP_002510801.1| pentatricopeptide repeat-containing protein,...   110   2e-22
gb|EMJ20742.1| hypothetical protein PRUPE_ppa022784mg [Prunus pe...   108   7e-22
ref|XP_004168536.1| PREDICTED: pentatricopeptide repeat-containi...    99   8e-19
gb|EOY23172.1| Tetratricopeptide repeat superfamily protein, put...    98   1e-18
gb|EMS64990.1| hypothetical protein TRIUR3_20790 [Triticum urartu]     67   3e-09
ref|XP_004963371.1| PREDICTED: pentatricopeptide repeat-containi...    64   3e-08
gb|EOY11630.1| Tetratricopeptide repeat (TPR)-like superfamily p...    58   1e-06
ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat...    57   3e-06
ref|XP_002318226.1| predicted protein [Populus trichocarpa]            55   1e-05

>ref|XP_002267810.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 499

 Score =  127 bits (318), Expect = 2e-27
 Identities = 57/91 (62%), Positives = 73/91 (80%)
 Frame = +3

Query: 39  MVCPLQQKVSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIF 218
           M+CPL+Q++  LLQ+CTF QLKQIHAFI+TTSL  + QI   F+RRSTEFG M+YP L+F
Sbjct: 1   MLCPLEQRIPYLLQQCTFNQLKQIHAFILTTSLLHDIQISSKFLRRSTEFGAMEYPSLVF 60

Query: 219 SQMGGFCNHEIALWNVMLRGYAHNGPQENCI 311
           SQ+GG  N +I +WN M+RGYA+NGP + CI
Sbjct: 61  SQLGGVFNTDIMIWNGMIRGYAYNGPVDRCI 91


>ref|XP_006377070.1| hypothetical protein POPTR_0012s13270g [Populus trichocarpa]
           gi|550327037|gb|ERP54867.1| hypothetical protein
           POPTR_0012s13270g [Populus trichocarpa]
          Length = 480

 Score =  111 bits (277), Expect = 1e-22
 Identities = 54/91 (59%), Positives = 65/91 (71%)
 Frame = +3

Query: 39  MVCPLQQKVSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIF 218
           M C L+ K+S  L KCTF+ LKQIHA IIT SL +N +I   F+RR+TEFG MDY  LIF
Sbjct: 1   MPCNLELKISKTLPKCTFQHLKQIHALIITCSLSKNIKIFSKFLRRTTEFGRMDYSNLIF 60

Query: 219 SQMGGFCNHEIALWNVMLRGYAHNGPQENCI 311
           SQMG   + EI +WN M+RGYA NGP + CI
Sbjct: 61  SQMGHDSSAEIVIWNAMIRGYAFNGPFQECI 91


>ref|XP_002510801.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223549916|gb|EEF51403.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 450

 Score =  110 bits (275), Expect = 2e-22
 Identities = 57/92 (61%), Positives = 65/92 (70%), Gaps = 1/92 (1%)
 Frame = +3

Query: 39  MVCPLQQKVSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIF 218
           M C  Q+K+S +L KCTF+ LKQIHAFII  SL  N QI   F+RRSTEFG MDY  LIF
Sbjct: 1   MPCNFQEKISHILPKCTFQHLKQIHAFIIAASLTHNIQIFSKFLRRSTEFGSMDYSHLIF 60

Query: 219 SQMG-GFCNHEIALWNVMLRGYAHNGPQENCI 311
           SQMG  +   EI LWN+M+RGYA NGP E  I
Sbjct: 61  SQMGHDYFITEIMLWNIMIRGYAFNGPFERAI 92


>gb|EMJ20742.1| hypothetical protein PRUPE_ppa022784mg [Prunus persica]
          Length = 498

 Score =  108 bits (270), Expect = 7e-22
 Identities = 51/91 (56%), Positives = 67/91 (73%)
 Frame = +3

Query: 39  MVCPLQQKVSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIF 218
           M C L+  +S +L +CTF+QLKQIHA I+TT L+QN QI   F+RRSTEFG M+YP LIF
Sbjct: 1   MACSLELNLSKVLPQCTFRQLKQIHALIVTTFLNQNIQIFSKFLRRSTEFGTMEYPNLIF 60

Query: 219 SQMGGFCNHEIALWNVMLRGYAHNGPQENCI 311
           SQ+G   +++I + N M+RGY  NGP E C+
Sbjct: 61  SQLGPELSNDIMIQNAMIRGYDTNGPFEKCV 91


>ref|XP_004168536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Cucumis sativus]
          Length = 502

 Score = 98.6 bits (244), Expect = 8e-19
 Identities = 46/91 (50%), Positives = 59/91 (64%)
 Frame = +3

Query: 39  MVCPLQQKVSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIF 218
           M+  L+ K+S LL +C F QLKQIHA ++TTS+HQN  I   F+RR+TEF  MDY  L+F
Sbjct: 1   MMMNLEPKISELLPRCNFPQLKQIHALLLTTSIHQNIHISSSFLRRTTEFRIMDYASLVF 60

Query: 219 SQMGGFCNHEIALWNVMLRGYAHNGPQENCI 311
           S +      EI  WN M+RGYA NGP    +
Sbjct: 61  SHLSPSFKTEIQFWNAMIRGYAFNGPAHQSV 91


>gb|EOY23172.1| Tetratricopeptide repeat superfamily protein, putative [Theobroma
           cacao]
          Length = 546

 Score = 98.2 bits (243), Expect = 1e-18
 Identities = 50/83 (60%), Positives = 59/83 (71%)
 Frame = +3

Query: 63  VSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIFSQMGGFCN 242
           +S+LL  CTF QLKQIHA IITT+L QN  I   F+RRSTEFG M Y  LIFS+MG    
Sbjct: 4   ISNLLPHCTFNQLKQIHALIITTALCQNFHIFSTFLRRSTEFGSMVYSDLIFSKMGTPFY 63

Query: 243 HEIALWNVMLRGYAHNGPQENCI 311
             I  WN+M+RGYA NGP E+C+
Sbjct: 64  SRIMPWNIMVRGYAFNGPLEDCM 86


>gb|EMS64990.1| hypothetical protein TRIUR3_20790 [Triticum urartu]
          Length = 571

 Score = 66.6 bits (161), Expect = 3e-09
 Identities = 31/88 (35%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
 Frame = +3

Query: 51  LQQKVSSLLQKCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIFSQ-M 227
           L+ ++SS+ + CT +QL QIH  ++T+SLH+ P +    +RR+ + G+M +  L+FS  +
Sbjct: 4   LEARLSSVAKNCTRRQLNQIHGLLLTSSLHRLPGLPALLVRRAADVGDMAHADLLFSSFL 63

Query: 228 GGFCNHEIALWNVMLRGYAHNGPQENCI 311
                 + AL+N M+RG +++GP E  +
Sbjct: 64  RSGAPPDAALYNAMIRGRSYHGPHERAL 91


>ref|XP_004963371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g29230-like [Setaria italica]
          Length = 514

 Score = 63.5 bits (153), Expect = 3e-08
 Identities = 35/90 (38%), Positives = 57/90 (63%), Gaps = 3/90 (3%)
 Frame = +3

Query: 51  LQQKVSSLLQKCTFK-QLKQIHAFIITTS-LHQNPQIRLYFMRRSTEFGEMDYPGLIFSQ 224
           L  +++ LL+ C  K QL QIH  ++T+S LH+ P +R   +RR+TE G+M +  L+FS 
Sbjct: 5   LPPRLTILLKDCASKRQLDQIHGLLLTSSSLHRLPGLRALLVRRATEIGDMAHAALLFSS 64

Query: 225 MGGFCNHE-IALWNVMLRGYAHNGPQENCI 311
             G    + +AL+N M+RG A++GP +  +
Sbjct: 65  FRGTDPPDAVALYNAMIRGCAYHGPHDRAL 94


>gb|EOY11630.1| Tetratricopeptide repeat (TPR)-like superfamily protein [Theobroma
           cacao]
          Length = 484

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
 Frame = +3

Query: 51  LQQKVSSLLQ-KCTFKQLKQIHAFIITTSLHQNPQIRLYFMRRSTEFGEMDYPGLIFSQM 227
           L++K+  LL  + T K L++IHA  +   LHQ+ QI  +F+       +MDY  L+F+Q 
Sbjct: 8   LERKILRLLHGQKTRKTLREIHAHFLRQCLHQSNQILSHFVSVCGHLNKMDYANLVFAQT 67

Query: 228 GGFCNHEIALWNVMLRGYAHNGPQENCI 311
               N  I L+N M++GY+ NGP E  I
Sbjct: 68  H---NPNILLFNSMIKGYSLNGPFEEAI 92


>ref|XP_004139361.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g05240-like [Cucumis sativus]
           gi|449525900|ref|XP_004169954.1| PREDICTED: putative
           pentatricopeptide repeat-containing protein
           At3g05240-like [Cucumis sativus]
          Length = 562

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 31/80 (38%), Positives = 49/80 (61%), Gaps = 3/80 (3%)
 Frame = +3

Query: 63  VSSLLQKC-TFKQLKQIHAFIITTSLHQN--PQIRLYFMRRSTEFGEMDYPGLIFSQMGG 233
           V S L+KC T K+LKQIH+ +ITTS+ +N  P  RL     ++E G+++Y   +F Q+  
Sbjct: 8   VMSFLEKCKTMKELKQIHSLMITTSVVKNIIPCSRLIDFCANSELGDIEYARTVFDQIN- 66

Query: 234 FCNHEIALWNVMLRGYAHNG 293
                + +WN M++GY + G
Sbjct: 67  --QRTVYIWNSMIKGYCNGG 84


>ref|XP_002318226.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 24/39 (61%), Positives = 28/39 (71%)
 Frame = +3

Query: 195 MDYPGLIFSQMGGFCNHEIALWNVMLRGYAHNGPQENCI 311
           MDY  LIFSQMG   + EI +WN M+RGYA NGP + CI
Sbjct: 1   MDYSNLIFSQMGHDSSAEIVIWNAMIRGYAFNGPFQECI 39