BLASTX nr result

ID: Catharanthus23_contig00028727 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028727
         (708 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300940.2| hypothetical protein POPTR_0002s07270g [Popu...    62   2e-07
ref|XP_006356292.1| PREDICTED: uncharacterized protein LOC102596...    62   2e-07
ref|XP_006434386.1| hypothetical protein CICLE_v10001283mg [Citr...    61   3e-07
ref|XP_006472925.1| PREDICTED: protein YLS7-like [Citrus sinensis]     61   4e-07
ref|XP_003523401.1| PREDICTED: protein YLS7-like [Glycine max]         58   3e-06
gb|ACU14578.1| unknown [Glycine max]                                   58   3e-06
ref|XP_004290565.1| PREDICTED: uncharacterized protein LOC101310...    58   3e-06
ref|XP_004237733.1| PREDICTED: uncharacterized protein LOC101261...    56   1e-05
ref|XP_003526674.1| PREDICTED: protein YLS7-like [Glycine max]         56   1e-05

>ref|XP_002300940.2| hypothetical protein POPTR_0002s07270g [Populus trichocarpa]
           gi|118485062|gb|ABK94394.1| unknown [Populus
           trichocarpa] gi|118485245|gb|ABK94482.1| unknown
           [Populus trichocarpa] gi|550344467|gb|EEE80213.2|
           hypothetical protein POPTR_0002s07270g [Populus
           trichocarpa]
          Length = 421

 Score = 62.0 bits (149), Expect = 2e-07
 Identities = 33/75 (44%), Positives = 45/75 (60%), Gaps = 1/75 (1%)
 Frame = +2

Query: 395 MPEMMNKVYINSLAHLRPVYMNVFSFVK-LITGNYCKSWVFQSFNVLIVIGSLVFFLVAI 571
           M EM++     S  HLRP    V SF K ++   +CK W+FQSFN ++V+GSL+ FL+A+
Sbjct: 1   MIEMVDSFNHWSFGHLRPFVKRVLSFGKGVVIKGHCKFWIFQSFNGVVVVGSLLSFLLAM 60

Query: 572 GSGYFYLSPSVQPAI 616
              Y  L P  QP I
Sbjct: 61  AYVYVILFPRFQPVI 75


>ref|XP_006356292.1| PREDICTED: uncharacterized protein LOC102596462 [Solanum tuberosum]
          Length = 419

 Score = 61.6 bits (148), Expect = 2e-07
 Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 3/93 (3%)
 Frame = +2

Query: 404 MMNKVYINSLAHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVF-FLVAIGSG 580
           M+ K+  +S  HLR   +   +F K+    +C +WVF SFN ++VIG L+  FLVAIGSG
Sbjct: 1   MVKKLKFSSCGHLRSDLVKDLNFGKM---KHCHTWVFHSFNGVLVIGPLLLLFLVAIGSG 57

Query: 581 YFYLSPSVQPAIPNLENNTASDLVTK--IFDNN 673
           YFY + S    I +   N  S+L  K   FD N
Sbjct: 58  YFYNAYSFPEPIVHENENRTSNLSGKCNFFDGN 90


>ref|XP_006434386.1| hypothetical protein CICLE_v10001283mg [Citrus clementina]
           gi|557536508|gb|ESR47626.1| hypothetical protein
           CICLE_v10001283mg [Citrus clementina]
          Length = 421

 Score = 61.2 bits (147), Expect = 3e-07
 Identities = 36/84 (42%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
 Frame = +2

Query: 404 MMNKVYINSL-AHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVFFLVAIGSG 580
           M++   ++SL  H R VY  VFSF   +   +CK W+FQ F VL   GSLV FL+AI   
Sbjct: 1   MVSGFSLSSLFGHFRSVYYEVFSFSNKLIKGHCKIWIFQPFYVL-ASGSLVTFLLAIMCA 59

Query: 581 YFYLSPSVQPAIPNLENNTASDLV 652
           Y YL P  QP   + E   +S+ V
Sbjct: 60  YLYLFPKFQPVTDSYETPKSSNSV 83


>ref|XP_006472925.1| PREDICTED: protein YLS7-like [Citrus sinensis]
          Length = 421

 Score = 60.8 bits (146), Expect = 4e-07
 Identities = 33/72 (45%), Positives = 40/72 (55%)
 Frame = +2

Query: 437 HLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVFFLVAIGSGYFYLSPSVQPAI 616
           H R VY  VFSF   +   +CK W+FQ F VL   GSLV FL+AI   Y YL P  QP  
Sbjct: 13  HFRSVYYEVFSFSNKLIKGHCKIWIFQPFYVL-ASGSLVTFLLAIMCAYLYLFPKFQPVT 71

Query: 617 PNLENNTASDLV 652
            + E   +S+ V
Sbjct: 72  DSYETPKSSNSV 83


>ref|XP_003523401.1| PREDICTED: protein YLS7-like [Glycine max]
          Length = 459

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +2

Query: 428 SLAHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVFFLVAIGSGYFYLSPSVQ 607
           S A  R ++   F +   +    C +W+F SFN L+ +GS +FFL+ +   Y Y  PS Q
Sbjct: 24  SFAKFRTLFSRAFGYGHKVVKGDCSTWIFVSFNGLVTVGSFIFFLLVLSWAYLYAFPSSQ 83

Query: 608 PAIPNLE--NNTASDLVTKIFDNNTSNDFVVHTFD 706
             I + E   N++  LV      + S+D +V ++D
Sbjct: 84  SLIQSHEIPINSSDSLVQSYEIPSNSSDSLVQSYD 118


>gb|ACU14578.1| unknown [Glycine max]
          Length = 228

 Score = 58.2 bits (139), Expect = 3e-06
 Identities = 30/95 (31%), Positives = 49/95 (51%), Gaps = 2/95 (2%)
 Frame = +2

Query: 428 SLAHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVFFLVAIGSGYFYLSPSVQ 607
           S A  R ++   F +   +    C +W+F SFN L+ +GS +FFL+ +   Y Y  PS Q
Sbjct: 24  SFAKFRTLFSRAFGYGHKVVKGDCSTWIFVSFNGLVTVGSFIFFLLVLSWAYLYAFPSSQ 83

Query: 608 PAIPNLE--NNTASDLVTKIFDNNTSNDFVVHTFD 706
             I + E   N++  LV      + S+D +V ++D
Sbjct: 84  SLIQSHEIPINSSDSLVQSYEIPSNSSDSLVQSYD 118


>ref|XP_004290565.1| PREDICTED: uncharacterized protein LOC101310481 [Fragaria vesca
           subsp. vesca]
          Length = 421

 Score = 57.8 bits (138), Expect = 3e-06
 Identities = 27/72 (37%), Positives = 40/72 (55%)
 Frame = +2

Query: 401 EMMNKVYINSLAHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVFFLVAIGSG 580
           EM+  V   S A  R  Y  V  F   +   Y K W+FQ+F+ L+ IGSLV F++A+   
Sbjct: 2   EMVRNVSWVSFAQFRSFYKRVLKFGNEMMKGYWKVWIFQTFHGLVAIGSLVSFILALAFA 61

Query: 581 YFYLSPSVQPAI 616
           Y Y+ P++ P +
Sbjct: 62  YMYMFPTITPVV 73


>ref|XP_004237733.1| PREDICTED: uncharacterized protein LOC101261913 [Solanum
           lycopersicum]
          Length = 416

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 34/82 (41%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
 Frame = +2

Query: 404 MMNKVYINSLAHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVF-FLVAIGSG 580
           M+ K+  +S  HLR   +   +F K+    +C +WVF SFN ++VIG L+  FLVAIGSG
Sbjct: 1   MVKKLKFSSCGHLRSDLVKDLNFGKM---KHCHTWVFHSFNGVLVIGPLLLLFLVAIGSG 57

Query: 581 YFYLSPSVQPAIPNLENNTASD 646
           Y Y   S    I +   N  SD
Sbjct: 58  YLYNIYSFPEPIVHENENRTSD 79


>ref|XP_003526674.1| PREDICTED: protein YLS7-like [Glycine max]
          Length = 477

 Score = 56.2 bits (134), Expect = 1e-05
 Identities = 30/91 (32%), Positives = 47/91 (51%), Gaps = 3/91 (3%)
 Frame = +2

Query: 428 SLAHLRPVYMNVFSFVKLITGNYCKSWVFQSFNVLIVIGSLVFFLVAIGSGYFYLSPSVQ 607
           S A  R ++   F +   +    C +W+F SFN L+ + S +FFL+ +   Y Y  PS Q
Sbjct: 24  SFAKFRTLFSRAFGYGHKVVKGDCNAWIFVSFNGLVTVSSFIFFLLVLSWAYLYAIPSSQ 83

Query: 608 PAIPNLE--NNTASDLV-TKIFDNNTSNDFV 691
             I + E  NN++   V +    NN+S+ FV
Sbjct: 84  SLIRSHEIPNNSSDSFVQSHEIPNNSSDSFV 114


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