BLASTX nr result

ID: Catharanthus23_contig00028661 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028661
         (377 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006343106.1| PREDICTED: uncharacterized protein LOC102577...    88   1e-15
ref|XP_004235698.1| PREDICTED: uncharacterized protein LOC543949...    86   7e-15
gb|AAU04618.1| CENP-C [Solanum tuberosum]                              84   1e-14
dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]       84   2e-14
dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]     84   2e-14
emb|CBI36186.3| unnamed protein product [Vitis vinifera]               77   2e-12
dbj|BAI48081.1| centromere protein C homologue [Nicotiana tabacu...    74   2e-11
gb|EPS59112.1| hypothetical protein M569_15699, partial [Genlise...    65   9e-09
ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244...    62   1e-07
gb|EOY26668.1| Centromere protein C, putative isoform 2 [Theobro...    59   7e-07
gb|EOY26667.1| Centromere protein C, putative isoform 1 [Theobro...    59   7e-07

>ref|XP_006343106.1| PREDICTED: uncharacterized protein LOC102577589 [Solanum tuberosum]
          Length = 709

 Score = 88.2 bits (217), Expect = 1e-15
 Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPS-GTNDLDSVHDFMKSLTMNSPERV 102
           MV+E L+SD +DPL +L+G+SL P T+R STD   S    DL+S+H+FMKS+   SP  +
Sbjct: 1   MVNEALISDPVDPLHSLAGLSLLPTTVRVSTDASVSVNPKDLESIHNFMKSMETKSP-GL 59

Query: 101 MDEAKAIVDAGSELLNSQFVKFTESIGIAKDVA 3
           ++EA+ IVD G+ELLN++F  F  S GI  D+A
Sbjct: 60  LEEAREIVDNGAELLNTKFTSFILSKGIDGDLA 92


>ref|XP_004235698.1| PREDICTED: uncharacterized protein LOC543949 [Solanum lycopersicum]
          Length = 709

 Score = 85.5 bits (210), Expect = 7e-15
 Identities = 45/93 (48%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPS-GTNDLDSVHDFMKSLTMNSPERV 102
           MV+E L+SD +DPL +L+G+SL P T+R ST    S  + DL+S+H+FMKS+    P  +
Sbjct: 1   MVNEALISDPVDPLHSLAGLSLLPTTVRVSTGASVSVDSKDLESIHNFMKSMETKGP-GL 59

Query: 101 MDEAKAIVDAGSELLNSQFVKFTESIGIAKDVA 3
           ++EA+ IVD G+ELLN++F  F  S GI  D+A
Sbjct: 60  LEEAREIVDNGAELLNTKFTSFIRSKGIDGDLA 92


>gb|AAU04618.1| CENP-C [Solanum tuberosum]
          Length = 384

 Score = 84.3 bits (207), Expect = 1e-14
 Identities = 45/93 (48%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPS-GTNDLDSVHDFMKSLTMNSPERV 102
           MV+E L+SD +DPL +L+G+SL P T+R STD   S    DL+ +H+FMKS+    P  +
Sbjct: 1   MVNEALISDPVDPLHSLAGLSLLPTTVRVSTDASVSVNPKDLELIHNFMKSMETKGP-GL 59

Query: 101 MDEAKAIVDAGSELLNSQFVKFTESIGIAKDVA 3
           ++EA+ IVD G+ELLN++F  F  S GI  D+A
Sbjct: 60  LEEAREIVDNGAELLNTKFTSFILSKGIDGDLA 92


>dbj|BAI48085.1| centromere protein C [Nicotiana tomentosiformis]
          Length = 714

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPSGTNDLDSVHDFMKSLTMNSPERVM 99
           M +E L SD +DPLR L G+SLFP+TIR  TDV      DL+SVH+FMKSL    P ++ 
Sbjct: 1   MANEALTSDPVDPLRGLVGLSLFPKTIRVCTDVSVD-PKDLESVHNFMKSLETKMPAKLF 59

Query: 98  DEAKAIVDAGSELLNSQFVKFTESIGIAKDVA 3
           +EA+AIVD  +ELLN      T+ +GI  D+A
Sbjct: 60  EEARAIVDNAAELLN------TKCMGIDGDLA 85


>dbj|BAI48084.1| centromere protein C homologue [Nicotiana tabacum]
          Length = 714

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 47/92 (51%), Positives = 61/92 (66%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPSGTNDLDSVHDFMKSLTMNSPERVM 99
           M +E L SD +DPLR L G+SLFP+TIR  TDV      DL+SVH+FMKSL    P ++ 
Sbjct: 1   MANEALTSDPVDPLRGLVGLSLFPKTIRVCTDVSVD-PKDLESVHNFMKSLETKMPAKLF 59

Query: 98  DEAKAIVDAGSELLNSQFVKFTESIGIAKDVA 3
           +EA+AIVD  +ELLN      T+ +GI  D+A
Sbjct: 60  EEARAIVDNAAELLN------TKCMGIDGDLA 85


>emb|CBI36186.3| unnamed protein product [Vitis vinifera]
          Length = 899

 Score = 77.0 bits (188), Expect = 2e-12
 Identities = 37/79 (46%), Positives = 56/79 (70%), Gaps = 1/79 (1%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVL-PSGTNDLDSVHDFMKSLTMNSPERV 102
           M ++   SD  DPL    G+SLFPRT R S+ V  PSG +++DS+H ++KS+ + SP ++
Sbjct: 1   MANDRRSSDLADPLLGYFGLSLFPRTFRDSSTVSKPSGHDNIDSLHSYLKSMALRSPTKL 60

Query: 101 MDEAKAIVDAGSELLNSQF 45
           +++AK+I+D GSELLN  F
Sbjct: 61  LEQAKSILDGGSELLNPNF 79


>dbj|BAI48081.1| centromere protein C homologue [Nicotiana tabacum]
           gi|262263167|dbj|BAI48086.1| centromere protein C
           [Nicotiana sylvestris]
          Length = 715

 Score = 73.9 bits (180), Expect = 2e-11
 Identities = 43/92 (46%), Positives = 58/92 (63%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVLPSGTNDLDSVHDFMKSLTMNSPERVM 99
           M +E   S  +DPL  L G+SLFP+TIR  TDV     N L+SVH+FMKSL   S  ++ 
Sbjct: 1   MANEAPTSGPVDPLHGLVGLSLFPKTIRVCTDVSVDPKN-LESVHNFMKSLETKSSAKLF 59

Query: 98  DEAKAIVDAGSELLNSQFVKFTESIGIAKDVA 3
           +EA+AIVD  +ELLN      T+ +G+  D+A
Sbjct: 60  EEARAIVDNAAELLN------TKCMGVDGDLA 85


>gb|EPS59112.1| hypothetical protein M569_15699, partial [Genlisea aurea]
          Length = 141

 Score = 65.1 bits (157), Expect = 9e-09
 Identities = 33/69 (47%), Positives = 48/69 (69%), Gaps = 1/69 (1%)
 Frame = -1

Query: 245 DPLRALSGISLFPRTIRASTD-VLPSGTNDLDSVHDFMKSLTMNSPERVMDEAKAIVDAG 69
           DPL+  +  +LFPRTI +     +P+   DLDS++ FMKSL + SPE++++EAK IVD G
Sbjct: 3   DPLKVFNWPALFPRTIISKIGGQVPTEFKDLDSINQFMKSLELKSPEKLLNEAKRIVDGG 62

Query: 68  SELLNSQFV 42
           +EL+ S  V
Sbjct: 63  AELVESNLV 71


>ref|XP_002280442.2| PREDICTED: uncharacterized protein LOC100244530 [Vitis vinifera]
          Length = 949

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 36/102 (35%), Positives = 54/102 (52%), Gaps = 24/102 (23%)
 Frame = -1

Query: 278 MVSEPLMSDSIDPLRALSGISLFPRTIRASTDVL-PSGTNDLDSVHDFMKS--------- 129
           M ++   SD  DPL    G+SLFPRT R S+ V  PSG +++DS+H ++K          
Sbjct: 1   MANDRRSSDLADPLLGYFGLSLFPRTFRDSSTVSKPSGHDNIDSLHSYLKENRRKEENDE 60

Query: 128 --------------LTMNSPERVMDEAKAIVDAGSELLNSQF 45
                           + SP +++++AK+I+D GSELLN  F
Sbjct: 61  TLISVFYAGLVKGGFALRSPTKLLEQAKSILDGGSELLNPNF 102


>gb|EOY26668.1| Centromere protein C, putative isoform 2 [Theobroma cacao]
          Length = 727

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -1

Query: 305 NFRRSDDMEMVSEPLMSDSIDPLRALSGISLFPRTIRASTDV-LPSGTNDLDSVHDFMKS 129
           N   S   EM   PL + + DPL   +G+SLF RT  +  +   P   +DL   H F+KS
Sbjct: 5   NLTPSKQKEM---PLQTLAPDPLEGYTGLSLFARTFASLPNPPRPYDPDDLQHSHHFLKS 61

Query: 128 LTMNSPERVMDEAKAIVDAGSELLN 54
           + + SP +++++AKAIVD  SEL+N
Sbjct: 62  MPLQSPNKLLEQAKAIVDESSELVN 86


>gb|EOY26667.1| Centromere protein C, putative isoform 1 [Theobroma cacao]
          Length = 729

 Score = 58.9 bits (141), Expect = 7e-07
 Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 1/85 (1%)
 Frame = -1

Query: 305 NFRRSDDMEMVSEPLMSDSIDPLRALSGISLFPRTIRASTDV-LPSGTNDLDSVHDFMKS 129
           N   S   EM   PL + + DPL   +G+SLF RT  +  +   P   +DL   H F+KS
Sbjct: 5   NLTPSKQKEM---PLQTLAPDPLEGYTGLSLFARTFASLPNPPRPYDPDDLQHSHHFLKS 61

Query: 128 LTMNSPERVMDEAKAIVDAGSELLN 54
           + + SP +++++AKAIVD  SEL+N
Sbjct: 62  MPLQSPNKLLEQAKAIVDESSELVN 86


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