BLASTX nr result

ID: Catharanthus23_contig00028657 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028657
         (368 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28998.3| unnamed protein product [Vitis vinifera]               66   5e-09
ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containi...    59   5e-07

>emb|CBI28998.3| unnamed protein product [Vitis vinifera]
          Length = 732

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 38/87 (43%), Positives = 50/87 (57%)
 Frame = -1

Query: 263 FIGKNKRRFFHVTVKQQLYSSPFSSYAVGNGQMTIASALAFSAESKSLVLGTKVHSQLIK 84
           F  K  R   HV   +    S  SS +  N    +++AL  SA SK ++LG+++H+Q+IK
Sbjct: 47  FTNKMLRNQHHVYTSKSCNCS--SSLSFRNDPTALSTALTHSANSKCILLGSQIHAQIIK 104

Query: 83  LGCRNDTFIQNNLIRMYMKCECLDDAL 3
           LG  ND F QNNLIRMY KC  L   L
Sbjct: 105 LGFCNDIFSQNNLIRMYTKCGFLAGGL 131


>ref|XP_004143701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 759

 Score = 59.3 bits (142), Expect = 5e-07
 Identities = 27/54 (50%), Positives = 37/54 (68%)
 Frame = -1

Query: 185 AVGNGQMTIASALAFSAESKSLVLGTKVHSQLIKLGCRNDTFIQNNLIRMYMKC 24
           A+G    TIA+AL+ S  +KSL+LG +VH  + KLG   DTF  NNL++MY +C
Sbjct: 7   ALGRDPKTIATALSLSENTKSLILGAQVHGHMCKLGFDYDTFSMNNLLKMYFRC 60


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