BLASTX nr result
ID: Catharanthus23_contig00028647
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028647
(338 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera] 95 3e-22
dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis t... 91 3e-22
gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsi... 82 3e-21
gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsi... 81 3e-21
emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera] 86 1e-20
emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera] 86 1e-20
emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera] 85 1e-20
emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera] 85 1e-20
gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsi... 81 4e-20
gb|AAT40486.1| putative polyprotein [Solanum demissum] 81 4e-20
emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera] 80 6e-20
gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis tha... 83 8e-20
emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis th... 83 8e-20
dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis t... 83 1e-19
gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsi... 83 1e-19
gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidop... 81 1e-19
emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera] 84 2e-19
emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera] 75 7e-19
dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis t... 77 1e-17
gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsi... 77 1e-17
>emb|CAN82105.1| hypothetical protein VITISV_002577 [Vitis vinifera]
Length = 1109
Score = 94.7 bits (234), Expect(2) = 3e-22
Identities = 36/73 (49%), Positives = 52/73 (71%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
+ +APS+ H+ F CL Y HD KDKF R R+C+F+GYP+GKKGW+ YDL+ E+
Sbjct: 536 YGQAPSYKHIXTFGCLCYAHDQNRDKDKFASRSRKCIFVGYPFGKKGWRLYDLESGEYFV 595
Query: 63 SRDVVFIEDKFLF 25
SR+V+F+E +F +
Sbjct: 596 SRBVIFVEAEFSY 608
Score = 35.8 bits (81), Expect(2) = 3e-22
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F GE VL A YLIN TP L GKTP+
Sbjct: 501 HLPIEFWGECVLIARYLINXTPSVFLDGKTPY 532
>dbj|BAA97099.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1098
Score = 91.3 bits (225), Expect(2) = 3e-22
Identities = 40/71 (56%), Positives = 49/71 (69%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F PS+S L+ F CL Y H KDKF R R+CVF+GYPYGKKGW+ YDL++++F
Sbjct: 716 FGSRPSYSALRTFGCLCYAHYRARDKDKFSERSRRCVFVGYPYGKKGWRLYDLEKNKFFV 775
Query: 63 SRDVVFIEDKF 31
SRDVVF E F
Sbjct: 776 SRDVVFQETVF 786
Score = 39.3 bits (90), Expect(2) = 3e-22
Identities = 18/32 (56%), Positives = 23/32 (71%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F GE +LTA +LINRTP IL GK+P+
Sbjct: 681 HLPRKFRGESILTAIHLINRTPTKILHGKSPY 712
>gb|AAD19784.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1501
Score = 82.4 bits (202), Expect(2) = 3e-21
Identities = 36/67 (53%), Positives = 47/67 (70%)
Frame = -3
Query: 231 PSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVASRDV 52
P +S L+ F YVH KDKF R R C+F+GYP+GKKGWK YD++R+EF+ SRDV
Sbjct: 744 PVYSQLRVFGSACYVHRVTRDKDKFGQRSRSCIFVGYPFGKKGWKVYDIERNEFLVSRDV 803
Query: 51 VFIEDKF 31
+F E+ F
Sbjct: 804 IFREEVF 810
Score = 44.7 bits (104), Expect(2) = 3e-21
Identities = 20/32 (62%), Positives = 24/32 (75%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F GE +LTA YLINRTP SIL G+TP+
Sbjct: 705 SLPIKFWGESILTAAYLINRTPSSILSGRTPY 736
>gb|AAB87099.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1496
Score = 81.3 bits (199), Expect(2) = 3e-21
Identities = 36/69 (52%), Positives = 46/69 (66%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F + PS+ L++F CL Y H KDKF R R+CVF+GYP+GKK W+ YDL+ + A
Sbjct: 713 FGERPSYDMLRSFGCLCYAHIRPRNKDKFTSRSRKCVFIGYPHGKKAWRVYDLETGKIFA 772
Query: 63 SRDVVFIED 37
SRDV F ED
Sbjct: 773 SRDVRFHED 781
Score = 45.8 bits (107), Expect(2) = 3e-21
Identities = 20/32 (62%), Positives = 25/32 (78%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE +LTA +LINRTP ++LKGKTP+
Sbjct: 678 NLPVKFWGESILTATHLINRTPSAVLKGKTPY 709
>emb|CAN80919.1| hypothetical protein VITISV_002640 [Vitis vinifera]
Length = 1450
Score = 85.5 bits (210), Expect(2) = 1e-20
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F PS++ + F CL++ HD DKF R R+CVFLGYP+GKKGWK +DL E
Sbjct: 725 FGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFV 784
Query: 63 SRDVVFIEDKFLF 25
SRDV F ED F F
Sbjct: 785 SRDVKFFEDVFPF 797
Score = 40.0 bits (92), Expect(2) = 1e-20
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VL A +LINRTP +L KTPF
Sbjct: 690 NLPIYFWGESVLAAAHLINRTPSPLLHNKTPF 721
>emb|CAN83015.1| hypothetical protein VITISV_041694 [Vitis vinifera]
Length = 1099
Score = 85.5 bits (210), Expect(2) = 1e-20
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F PS++ + F CL++ HD DKF R R+CVFLGYP+GKKGWK +DL E
Sbjct: 392 FGTPPSYAAIHTFGCLSFAHDQKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFV 451
Query: 63 SRDVVFIEDKFLF 25
SRDV F ED F F
Sbjct: 452 SRDVKFFEDVFPF 464
Score = 40.0 bits (92), Expect(2) = 1e-20
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VL A +LINRTP +L KTPF
Sbjct: 357 NLPIYFWGESVLAAAHLINRTPSPLLHNKTPF 388
>emb|CAN69804.1| hypothetical protein VITISV_017631 [Vitis vinifera]
Length = 1191
Score = 85.1 bits (209), Expect(2) = 1e-20
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F PS++ + F CL++ HD DKF R R+CVFLGYP+GKKGWK +DL E
Sbjct: 437 FGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFV 496
Query: 63 SRDVVFIEDKFLF 25
SRDV F ED F F
Sbjct: 497 SRDVKFFEDVFPF 509
Score = 40.0 bits (92), Expect(2) = 1e-20
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VL A +LINRTP +L KTPF
Sbjct: 402 NLPIYFWGESVLAAAHLINRTPSPLLHNKTPF 433
>emb|CAN73272.1| hypothetical protein VITISV_013115 [Vitis vinifera]
Length = 1178
Score = 85.1 bits (209), Expect(2) = 1e-20
Identities = 38/73 (52%), Positives = 46/73 (63%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F PS++ + F CL++ HD DKF R R+CVFLGYP+GKKGWK +DL E
Sbjct: 478 FGTPPSYAAIHTFGCLSFAHDXKSKGDKFASRSRKCVFLGYPFGKKGWKLFDLDTKELFV 537
Query: 63 SRDVVFIEDKFLF 25
SRDV F ED F F
Sbjct: 538 SRDVKFFEDVFPF 550
Score = 40.0 bits (92), Expect(2) = 1e-20
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VL A +LINRTP +L KTPF
Sbjct: 443 NLPIYFWGESVLAAAHLINRTPSPLLHNKTPF 474
>gb|AAD24600.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 81.3 bits (199), Expect(2) = 4e-20
Identities = 36/71 (50%), Positives = 48/71 (67%)
Frame = -3
Query: 237 KAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVASR 58
K P HL+ F L Y H+ DKF R R+CVF+GYP+G+KGW+ +DL+++EF SR
Sbjct: 605 KQPRFDHLRVFGSLCYAHNRNRGGDKFAERSRRCVFVGYPHGQKGWRLFDLEQNEFFVSR 664
Query: 57 DVVFIEDKFLF 25
DVVF E +F F
Sbjct: 665 DVVFSELEFPF 675
Score = 42.4 bits (98), Expect(2) = 4e-20
Identities = 20/32 (62%), Positives = 22/32 (68%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VLTA YLINRTP S+L TP+
Sbjct: 568 NLPIQFWGECVLTAAYLINRTPSSVLNDSTPY 599
>gb|AAT40486.1| putative polyprotein [Solanum demissum]
Length = 1065
Score = 81.3 bits (199), Expect(2) = 4e-20
Identities = 36/71 (50%), Positives = 45/71 (63%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F K PS+ LK F C+ + H KDKF + RQC+FLGYP+GKKGW+ YDL+ +
Sbjct: 554 FGKEPSYKPLKVFGCICFAHLKSRDKDKFGSKSRQCIFLGYPFGKKGWRVYDLETGDLYV 613
Query: 63 SRDVVFIEDKF 31
SRDV F E F
Sbjct: 614 SRDVTFDEKIF 624
Score = 42.4 bits (98), Expect(2) = 4e-20
Identities = 21/32 (65%), Positives = 22/32 (68%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VL A YLINRTP IL GKTP+
Sbjct: 519 NLPISFWGEYVLPAVYLINRTPTLILNGKTPY 550
>emb|CAN67762.1| hypothetical protein VITISV_040650 [Vitis vinifera]
Length = 1316
Score = 79.7 bits (195), Expect(2) = 6e-20
Identities = 37/78 (47%), Positives = 46/78 (58%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F + P++ HL+ F L Y H + DKF R R+C F GYPYGKKGWK DL+ E
Sbjct: 602 FGEKPNYEHLRVFGSLCYAHKKSRSNDKFDXRSRRCXFXGYPYGKKGWKLXDLETKEQFE 661
Query: 63 SRDVVFIEDKFLFLPKSR 10
SRDV+F E F F S+
Sbjct: 662 SRDVIFHETIFPFCQSSK 679
Score = 43.1 bits (100), Expect(2) = 6e-20
Identities = 21/30 (70%), Positives = 22/30 (73%)
Frame = -2
Query: 331 PT*FLGERVLTAGYLINRTPLSILKGKTPF 242
P F GE VLTA YLINRTP IL GKTP+
Sbjct: 569 PIDFWGECVLTAAYLINRTPTPILDGKTPY 598
>gb|AAG50751.1|AC079733_19 polyprotein, putative [Arabidopsis thaliana]
Length = 1468
Score = 83.2 bits (204), Expect(2) = 8e-20
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
+ AP +SHL+ F L Y H+ DKF R R+CVF+GYP+G+KGW+ +DL+ +F
Sbjct: 727 YKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 786
Query: 63 SRDVVFIEDKF 31
SRDV+F E +F
Sbjct: 787 SRDVIFQETEF 797
Score = 39.3 bits (90), Expect(2) = 8e-20
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = -2
Query: 331 PT*FLGERVLTAGYLINRTPLSILKGKTPF 242
P F GE +L+A YLINRTP +L+GK+P+
Sbjct: 694 PIQFWGECILSAAYLINRTPSMLLQGKSPY 723
>emb|CAA18107.1| LTR retrotransposon like protein [Arabidopsis thaliana]
gi|7269049|emb|CAB79159.1| LTR retrotransposon like
protein [Arabidopsis thaliana]
Length = 1109
Score = 83.2 bits (204), Expect(2) = 8e-20
Identities = 34/71 (47%), Positives = 48/71 (67%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
+ AP +SHL+ F L Y H+ DKF R R+CVF+GYP+G+KGW+ +DL+ +F
Sbjct: 503 YKTAPKYSHLRVFGSLCYAHNQNHKGDKFAARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 562
Query: 63 SRDVVFIEDKF 31
SRDV+F E +F
Sbjct: 563 SRDVIFQETEF 573
Score = 39.3 bits (90), Expect(2) = 8e-20
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = -2
Query: 331 PT*FLGERVLTAGYLINRTPLSILKGKTPF 242
P F GE +L+A YLINRTP +L+GK+P+
Sbjct: 470 PIQFWGECILSAAYLINRTPSMLLQGKSPY 499
>dbj|BAB10743.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1109
Score = 82.8 bits (203), Expect(2) = 1e-19
Identities = 34/71 (47%), Positives = 49/71 (69%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
+ AP++SHL+ F L Y H+ DKF R R+CVF+GYP+G+KGW+ +DL+ +F
Sbjct: 503 YKTAPNYSHLRVFGSLCYAHNQNHKGDKFVARSRRCVFVGYPHGQKGWRLFDLEEQKFFV 562
Query: 63 SRDVVFIEDKF 31
SRDV+F E +F
Sbjct: 563 SRDVIFQETEF 573
Score = 39.3 bits (90), Expect(2) = 1e-19
Identities = 17/30 (56%), Positives = 23/30 (76%)
Frame = -2
Query: 331 PT*FLGERVLTAGYLINRTPLSILKGKTPF 242
P F GE +L+A YLINRTP +L+GK+P+
Sbjct: 470 PIQFWGECILSAAYLINRTPSMLLQGKSPY 499
>gb|AAD23883.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1156
Score = 82.8 bits (203), Expect(2) = 1e-19
Identities = 36/70 (51%), Positives = 47/70 (67%)
Frame = -3
Query: 240 NKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVAS 61
N P++ HL+ F YVH KDKF R R CVF+GYP+ +KGWK +D+++ EF+ S
Sbjct: 302 NSKPNYEHLRVFGSACYVHRASRDKDKFGERSRLCVFIGYPFAQKGWKVFDMEKKEFLVS 361
Query: 60 RDVVFIEDKF 31
RDVVF ED F
Sbjct: 362 RDVVFREDVF 371
Score = 38.9 bits (89), Expect(2) = 1e-19
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F GE VLTA YLINRTP S+ G +P+
Sbjct: 266 SLPIQFWGEAVLTAAYLINRTPTSLHNGLSPY 297
>gb|AAG51258.1|AC025782_3 Ty1/copia-element polyprotein [Arabidopsis thaliana]
Length = 1152
Score = 80.9 bits (198), Expect(2) = 1e-19
Identities = 35/76 (46%), Positives = 51/76 (67%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
+++ PS++ L+ F L + H DKF+ RGR+C+F+GYP+G+KGW+ YD++ F
Sbjct: 727 YSQPPSYASLRVFGSLCFARKHTGRLDKFQERGRKCIFVGYPHGQKGWRIYDIESQIFFV 786
Query: 63 SRDVVFIEDKFLFLPK 16
SRDVVF ED F F K
Sbjct: 787 SRDVVFQEDIFPFADK 802
Score = 40.8 bits (94), Expect(2) = 1e-19
Identities = 20/30 (66%), Positives = 21/30 (70%)
Frame = -2
Query: 331 PT*FLGERVLTAGYLINRTPLSILKGKTPF 242
P F E VLTA YLINRTP IL GKTP+
Sbjct: 694 PISFWEESVLTAAYLINRTPTPILDGKTPY 723
>emb|CAN76645.1| hypothetical protein VITISV_004685 [Vitis vinifera]
Length = 1196
Score = 83.6 bits (205), Expect(2) = 2e-19
Identities = 38/73 (52%), Positives = 45/73 (61%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F PS++ + F CL++ HD DKF R R+CVFLGYP+GKKGWK DL E
Sbjct: 605 FGTPPSYAAIHTFGCLSFAHDKKSKGDKFASRSRKCVFLGYPFGKKGWKLXDLDTKELFV 664
Query: 63 SRDVVFIEDKFLF 25
SRDV F ED F F
Sbjct: 665 SRDVKFFEDVFPF 677
Score = 37.7 bits (86), Expect(2) = 2e-19
Identities = 18/32 (56%), Positives = 20/32 (62%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
N P F GE VL A +LIN TP +L KTPF
Sbjct: 570 NLPIYFWGESVLAAAHLINXTPSPLLHNKTPF 601
>emb|CAN71595.1| hypothetical protein VITISV_010143 [Vitis vinifera]
Length = 1523
Score = 75.5 bits (184), Expect(2) = 7e-19
Identities = 33/71 (46%), Positives = 47/71 (66%)
Frame = -3
Query: 243 FNKAPSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVA 64
F+K+P++SHL+ F C +V H KF PR + VF+GYP+G+KG+K Y LK + +
Sbjct: 740 FHKSPNYSHLRVFGCRCFVSTHPLRPSKFDPRSIESVFIGYPHGQKGYKVYSLKDKKXLI 799
Query: 63 SRDVVFIEDKF 31
SRDV F E +F
Sbjct: 800 SRDVTFFETEF 810
Score = 43.9 bits (102), Expect(2) = 7e-19
Identities = 19/32 (59%), Positives = 24/32 (75%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F G+ +LTA YLINRTP +L+GKTPF
Sbjct: 705 HLPKPFWGDAILTAAYLINRTPTPLLQGKTPF 736
>dbj|BAA97287.1| retroelement pol polyprotein-like [Arabidopsis thaliana]
Length = 1491
Score = 76.6 bits (187), Expect(2) = 1e-17
Identities = 34/67 (50%), Positives = 43/67 (64%)
Frame = -3
Query: 231 PSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVASRDV 52
P + L+ F Y H KDKF R R C+F+GYP+G+KGWK YDL +EF+ SRDV
Sbjct: 727 PDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDV 786
Query: 51 VFIEDKF 31
VF E+ F
Sbjct: 787 VFRENVF 793
Score = 38.5 bits (88), Expect(2) = 1e-17
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F GE V+TA YLINRTP SI G +P+
Sbjct: 688 SLPIKFWGEAVMTAAYLINRTPSSIHNGLSPY 719
>gb|AAC67205.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1413
Score = 76.6 bits (187), Expect(2) = 1e-17
Identities = 34/67 (50%), Positives = 43/67 (64%)
Frame = -3
Query: 231 PSHSHLKNFECLAYVHDHGFTKDKFRPRGRQCVFLGYPYGKKGWKFYDLKRHEFVASRDV 52
P + L+ F Y H KDKF R R C+F+GYP+G+KGWK YDL +EF+ SRDV
Sbjct: 727 PDYDQLRVFGSACYAHRVTRDKDKFGERSRLCIFVGYPFGQKGWKVYDLSTNEFIVSRDV 786
Query: 51 VFIEDKF 31
VF E+ F
Sbjct: 787 VFRENVF 793
Score = 38.5 bits (88), Expect(2) = 1e-17
Identities = 18/32 (56%), Positives = 22/32 (68%)
Frame = -2
Query: 337 NFPT*FLGERVLTAGYLINRTPLSILKGKTPF 242
+ P F GE V+TA YLINRTP SI G +P+
Sbjct: 688 SLPIKFWGEAVMTAAYLINRTPSSIHNGLSPY 719