BLASTX nr result
ID: Catharanthus23_contig00028611
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028611
(540 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog ... 159 3e-37
ref|XP_002326313.1| predicted protein [Populus trichocarpa] gi|5... 159 3e-37
dbj|BAF02935.1| RAD51 homolog [Populus nigra] 159 3e-37
ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum ly... 159 5e-37
ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog ... 158 7e-37
ref|XP_006452910.1| hypothetical protein CICLE_v10010591mg, part... 158 9e-37
ref|XP_006344556.1| PREDICTED: DNA repair protein RAD51 homolog ... 157 1e-36
gb|EXC13609.1| DNA repair protein RAD51-like protein [Morus nota... 156 3e-36
ref|XP_006474560.1| PREDICTED: DNA repair protein RAD51 homolog ... 156 3e-36
gb|EPS57838.1| hypothetical protein M569_16980 [Genlisea aurea] 156 3e-36
gb|EMJ03544.1| hypothetical protein PRUPE_ppa008236mg [Prunus pe... 156 3e-36
ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog ... 155 4e-36
ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog ... 155 4e-36
ref|NP_568402.1| DNA repair protein RAD51-like 1 [Arabidopsis th... 155 7e-36
ref|XP_006400650.1| hypothetical protein EUTSA_v10014015mg [Eutr... 155 7e-36
ref|XP_006288113.1| hypothetical protein CARUB_v10001345mg [Caps... 155 7e-36
dbj|BAE99388.1| RAD51 homolog [Arabidopsis thaliana] 155 7e-36
ref|XP_006664568.1| PREDICTED: DNA repair protein RAD51 homolog ... 154 1e-35
ref|XP_003577363.1| PREDICTED: DNA repair protein RAD51 homolog ... 154 1e-35
ref|XP_004979726.1| PREDICTED: DNA repair protein RAD51 homolog ... 154 1e-35
>ref|XP_004144057.1| PREDICTED: DNA repair protein RAD51 homolog [Cucumis sativus]
gi|449518135|ref|XP_004166099.1| PREDICTED: DNA repair
protein RAD51 homolog [Cucumis sativus]
Length = 340
Score = 159 bits (403), Expect = 3e-37
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 258 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 317
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQISAEGVTDVKD
Sbjct: 318 SPCLAEAEARFQISAEGVTDVKD 340
>ref|XP_002326313.1| predicted protein [Populus trichocarpa]
gi|566176241|ref|XP_006381549.1| hypothetical protein
POPTR_0006s13750g [Populus trichocarpa]
gi|550336254|gb|ERP59346.1| hypothetical protein
POPTR_0006s13750g [Populus trichocarpa]
Length = 348
Score = 159 bits (403), Expect = 3e-37
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 266 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 325
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQISAEGVTDVKD
Sbjct: 326 SPCLAEAEARFQISAEGVTDVKD 348
>dbj|BAF02935.1| RAD51 homolog [Populus nigra]
Length = 342
Score = 159 bits (403), Expect = 3e-37
Identities = 80/83 (96%), Positives = 82/83 (98%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 260 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQISAEGVTDVKD
Sbjct: 320 SPCLAEAEARFQISAEGVTDVKD 342
>ref|NP_001233788.1| DNA repair protein RAD51 homolog [Solanum lycopersicum]
gi|2500107|sp|Q40134.1|RAD51_SOLLC RecName: Full=DNA
repair protein RAD51 homolog gi|1143810|gb|AAC23700.1|
LeRAD51 [Solanum lycopersicum]
Length = 342
Score = 159 bits (401), Expect = 5e-37
Identities = 78/83 (93%), Positives = 82/83 (98%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQIKPIGGNIMAHA+TTRLALRKGRAEER+CKV+S
Sbjct: 260 DEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHASTTRLALRKGRAEERICKVVS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQIS EGVTDVKD
Sbjct: 320 SPCLAEAEARFQISVEGVTDVKD 342
>ref|XP_002273803.1| PREDICTED: DNA repair protein RAD51 homolog [Vitis vinifera]
gi|297738498|emb|CBI27743.3| unnamed protein product
[Vitis vinifera]
Length = 337
Score = 158 bits (400), Expect = 7e-37
Identities = 79/83 (95%), Positives = 82/83 (98%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 255 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 314
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEA+ARFQISAEGVTDVKD
Sbjct: 315 SPCLAEADARFQISAEGVTDVKD 337
>ref|XP_006452910.1| hypothetical protein CICLE_v10010591mg, partial [Citrus clementina]
gi|557556136|gb|ESR66150.1| hypothetical protein
CICLE_v10010591mg, partial [Citrus clementina]
Length = 310
Score = 158 bits (399), Expect = 9e-37
Identities = 80/83 (96%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA+TTRLALRKGR EERVCKVIS
Sbjct: 228 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERVCKVIS 287
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQISAEGV DVKD
Sbjct: 288 SPCLAEAEARFQISAEGVADVKD 310
>ref|XP_006344556.1| PREDICTED: DNA repair protein RAD51 homolog [Solanum tuberosum]
Length = 343
Score = 157 bits (398), Expect = 1e-36
Identities = 77/83 (92%), Positives = 82/83 (98%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+F+GPQIKPIGGNIMAHA+TTRLALRKGRAEER+CKV+S
Sbjct: 261 DEFGVAVVITNQVVAQVDGSAVFSGPQIKPIGGNIMAHASTTRLALRKGRAEERICKVVS 320
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQIS EGVTDVKD
Sbjct: 321 SPCLAEAEARFQISVEGVTDVKD 343
>gb|EXC13609.1| DNA repair protein RAD51-like protein [Morus notabilis]
Length = 364
Score = 156 bits (395), Expect = 3e-36
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQ+KPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 282 DEFGVAVVITNQVVAQVDGSAIFAGPQVKPIGGNIMAHASTTRLALRKGRGEERICKVIS 341
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQI+ EGVTDVKD
Sbjct: 342 SPCLAEAEARFQIAGEGVTDVKD 364
>ref|XP_006474560.1| PREDICTED: DNA repair protein RAD51 homolog [Citrus sinensis]
Length = 342
Score = 156 bits (395), Expect = 3e-36
Identities = 78/83 (93%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 260 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQISA+GV DVKD
Sbjct: 320 SPCLAEAEARFQISAQGVADVKD 342
>gb|EPS57838.1| hypothetical protein M569_16980 [Genlisea aurea]
Length = 309
Score = 156 bits (395), Expect = 3e-36
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQIKPIGGNIMAHATTTRL+LRKGR EER+CKV+S
Sbjct: 227 DEFGVAVVITNQVVAQVDGSAVFAGPQIKPIGGNIMAHATTTRLSLRKGRGEERICKVVS 286
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQISA+GVTD KD
Sbjct: 287 SPCLAEAEARFQISADGVTDAKD 309
>gb|EMJ03544.1| hypothetical protein PRUPE_ppa008236mg [Prunus persica]
Length = 340
Score = 156 bits (394), Expect = 3e-36
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSAIFAGPQ+KPIGGNIMAHA+TTRLA+RKGR EER+CKVIS
Sbjct: 258 DEFGVAVVITNQVVAQVDGSAIFAGPQVKPIGGNIMAHASTTRLAVRKGRGEERICKVIS 317
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQIS EGVTDVKD
Sbjct: 318 SPCLAEAEARFQISPEGVTDVKD 340
>ref|XP_003551035.1| PREDICTED: DNA repair protein RAD51 homolog [Glycine max]
Length = 343
Score = 155 bits (393), Expect = 4e-36
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVA+VITNQVV+QVDGSA+FAGPQIKPIGGNIMAHATTTRLALRKGR EER+CKVIS
Sbjct: 261 DEFGVAIVITNQVVSQVDGSAVFAGPQIKPIGGNIMAHATTTRLALRKGRGEERICKVIS 320
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQI AEGV+DVKD
Sbjct: 321 SPCLAEAEARFQICAEGVSDVKD 343
>ref|XP_003542386.1| PREDICTED: DNA repair protein RAD51 homolog 1-like [Glycine max]
Length = 344
Score = 155 bits (393), Expect = 4e-36
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVA+VITNQVV+QVDGSA+FAGPQIKPIGGNIMAHATTTRLALRKGR EER+CKVIS
Sbjct: 262 DEFGVAIVITNQVVSQVDGSAVFAGPQIKPIGGNIMAHATTTRLALRKGRGEERICKVIS 321
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQI AEGV+DVKD
Sbjct: 322 SPCLAEAEARFQICAEGVSDVKD 344
>ref|NP_568402.1| DNA repair protein RAD51-like 1 [Arabidopsis thaliana]
gi|55976288|sp|P94102.1|RAD51_ARATH RecName: Full=DNA
repair protein RAD51 homolog 1; AltName: Full=Rad51-like
protein 1; Short=AtRAD51 gi|1706947|gb|AAB37762.1| RAD51
homolog [Arabidopsis thaliana] gi|1706949|gb|AAC49555.1|
AtRAD51 [Arabidopsis thaliana]
gi|2388778|emb|CAA04529.1| Rad51-like protein
[Arabidopsis thaliana] gi|332005514|gb|AED92897.1| DNA
repair protein RAD51-like 1 [Arabidopsis thaliana]
Length = 342
Score = 155 bits (391), Expect = 7e-36
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQ KPIGGNIMAHATTTRLALRKGRAEER+CKVIS
Sbjct: 260 DEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLALRKGRAEERICKVIS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCL EAEARFQIS EGVTD KD
Sbjct: 320 SPCLPEAEARFQISTEGVTDCKD 342
>ref|XP_006400650.1| hypothetical protein EUTSA_v10014015mg [Eutrema salsugineum]
gi|557101740|gb|ESQ42103.1| hypothetical protein
EUTSA_v10014015mg [Eutrema salsugineum]
Length = 342
Score = 155 bits (391), Expect = 7e-36
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQ KPIGGNIMAHATTTRLALRKGRAEER+CKVIS
Sbjct: 260 DEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLALRKGRAEERICKVIS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCL EAEARFQIS EGVTD KD
Sbjct: 320 SPCLPEAEARFQISTEGVTDCKD 342
>ref|XP_006288113.1| hypothetical protein CARUB_v10001345mg [Capsella rubella]
gi|482556819|gb|EOA21011.1| hypothetical protein
CARUB_v10001345mg [Capsella rubella]
Length = 342
Score = 155 bits (391), Expect = 7e-36
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQ KPIGGNIMAHATTTRLALRKGRAEER+CKVIS
Sbjct: 260 DEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLALRKGRAEERICKVIS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCL EAEARFQIS EGVTD KD
Sbjct: 320 SPCLPEAEARFQISTEGVTDCKD 342
>dbj|BAE99388.1| RAD51 homolog [Arabidopsis thaliana]
Length = 342
Score = 155 bits (391), Expect = 7e-36
Identities = 77/83 (92%), Positives = 79/83 (95%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQ KPIGGNIMAHATTTRLALRKGRAEER+CKVIS
Sbjct: 260 DEFGVAVVITNQVVAQVDGSALFAGPQFKPIGGNIMAHATTTRLALRKGRAEERICKVIS 319
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCL EAEARFQIS EGVTD KD
Sbjct: 320 SPCLPEAEARFQISTEGVTDCKD 342
>ref|XP_006664568.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Oryza
brachyantha]
Length = 315
Score = 154 bits (390), Expect = 1e-35
Identities = 77/83 (92%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDG+A+FAGPQIKPIGGNIMAHA+TTRL LRKGRAEER+CKVIS
Sbjct: 233 DEFGVAVVITNQVVAQVDGAAMFAGPQIKPIGGNIMAHASTTRLFLRKGRAEERICKVIS 292
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQIS EGVTDVKD
Sbjct: 293 SPCLAEAEARFQISPEGVTDVKD 315
>ref|XP_003577363.1| PREDICTED: DNA repair protein RAD51 homolog B-like [Brachypodium
distachyon]
Length = 340
Score = 154 bits (390), Expect = 1e-35
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 258 DEFGVAVVITNQVVAQVDGSAMFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 317
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQ+S+EGV DVKD
Sbjct: 318 SPCLAEAEARFQLSSEGVADVKD 340
>ref|XP_004979726.1| PREDICTED: DNA repair protein RAD51 homolog A-like [Setaria
italica]
Length = 340
Score = 154 bits (389), Expect = 1e-35
Identities = 76/83 (91%), Positives = 81/83 (97%)
Frame = -1
Query: 540 DEFGVAVVITNQVVAQVDGSAIFAGPQIKPIGGNIMAHATTTRLALRKGRAEERVCKVIS 361
DEFGVAVVITNQVVAQVDGSA+FAGPQIKPIGGNIMAHA+TTRLALRKGR EER+CKVIS
Sbjct: 258 DEFGVAVVITNQVVAQVDGSAMFAGPQIKPIGGNIMAHASTTRLALRKGRGEERICKVIS 317
Query: 360 SPCLAEAEARFQISAEGVTDVKD 292
SPCLAEAEARFQI++EGV DVKD
Sbjct: 318 SPCLAEAEARFQIASEGVADVKD 340