BLASTX nr result

ID: Catharanthus23_contig00028368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028368
         (339 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006445240.1| hypothetical protein CICLE_v10019629mg [Citr...    55   7e-06

>ref|XP_006445240.1| hypothetical protein CICLE_v10019629mg [Citrus clementina]
           gi|557547502|gb|ESR58480.1| hypothetical protein
           CICLE_v10019629mg [Citrus clementina]
          Length = 539

 Score = 55.5 bits (132), Expect = 7e-06
 Identities = 33/89 (37%), Positives = 45/89 (50%), Gaps = 8/89 (8%)
 Frame = +2

Query: 14  SMNKIPLTAATPNRKISACDENEXXXXXXXXXXXXXXXXXVAMQMAMTPATPFVA----- 178
           S+  +P  A TP+++I AC+E                     M MAMTPATP V+     
Sbjct: 448 SLKAVPSVAVTPSKQIVACNEGNKAPNTMPSVPKTPSTFTAPMLMAMTPATPCVSLGAKA 507

Query: 179 ---TDELIEYSFEEKRAGFVLTKSCSRSL 256
              T + IEYSFEE RAGF+  K+ + +L
Sbjct: 508 NERTGDKIEYSFEEVRAGFICPKAETSNL 536


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