BLASTX nr result
ID: Catharanthus23_contig00028344
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028344
(355 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664... 61 9e-13
ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268... 64 3e-12
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana] 70 1e-11
gb|AAD15471.1| putative non-LTR retroelement reverse transcripta... 61 2e-11
gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana] 66 3e-11
ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665... 64 3e-11
ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661... 60 5e-11
ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298... 60 1e-10
emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|72694... 71 1e-10
ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660... 62 1e-10
gb|ABD96948.1| hypothetical protein [Cleome spinosa] 60 2e-10
gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thali... 60 2e-10
dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like ... 59 2e-10
gb|AAC63678.1| putative non-LTR retroelement reverse transcripta... 60 2e-10
gb|AAC33226.1| putative non-LTR retroelement reverse transcripta... 59 2e-10
gb|AAD22330.1| putative non-LTR retroelement reverse transcripta... 64 4e-10
emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulga... 60 4e-10
ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein A... 60 5e-10
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ... 65 7e-10
dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana] 65 7e-10
>ref|XP_006584238.1| PREDICTED: uncharacterized protein LOC102664824 [Glycine max]
Length = 939
Score = 61.2 bits (147), Expect(3) = 9e-13
Identities = 34/92 (36%), Positives = 47/92 (51%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G I S + D + GL N K NI+ V+ + + ++L GF G MP RYL
Sbjct: 526 GDIGSVQIMLDKFNTFLRSMGLHVNPSKCNIYCGSVDINVKEQLLLISGFKEGKMPFRYL 585
Query: 220 GIPLSGKYLKVADYSPLLDKVAGQYLHGRASI 315
GIPLS K L + Y L+DK+ G+ H A +
Sbjct: 586 GIPLSSKKLNIKHYQVLIDKIVGRITHWSAGL 617
Score = 31.2 bits (69), Expect(3) = 9e-13
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVKIV 68
+L FADDL++F+RGD SV+I+
Sbjct: 513 NLCFADDLLLFSRGDIGSVQIM 534
Score = 25.8 bits (55), Expect(3) = 9e-13
Identities = 12/21 (57%), Positives = 15/21 (71%)
Frame = +3
Query: 291 ILAWSGFNLSYAGRVEVICSI 353
I WS LSYAGRV++I S+
Sbjct: 610 ITHWSAGLLSYAGRVQLIQSV 630
>ref|XP_004253224.1| PREDICTED: uncharacterized protein LOC101268376 [Solanum
lycopersicum]
Length = 717
Score = 63.5 bits (153), Expect(2) = 3e-12
Identities = 30/67 (44%), Positives = 44/67 (65%)
Frame = +1
Query: 82 ELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLKVADY 261
E +ASGL AN KS+I+ GV+ R +I+ +G+TI +P +YLG+PLS K L +
Sbjct: 520 EFSQASGLQANLNKSSIYCGGVQMEVRQQIIQQLGYTIEELPFKYLGVPLSSKKLNTIQW 579
Query: 262 SPLLDKV 282
PL++KV
Sbjct: 580 YPLIEKV 586
Score = 33.5 bits (75), Expect(2) = 3e-12
Identities = 13/20 (65%), Positives = 17/20 (85%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL FADDL++F+RGD S+K
Sbjct: 493 HLCFADDLLLFSRGDLNSIK 512
>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
Length = 1213
Score = 70.1 bits (170), Expect(2) = 1e-11
Identities = 34/85 (40%), Positives = 54/85 (63%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G FS +C+ L + SGL N KS+++LAG+ + E + Y GF IG++P RYL
Sbjct: 707 GGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANAAY-GFPIGTLPIRYL 765
Query: 220 GIPLSGKYLKVADYSPLLDKVAGQY 294
G+PL + L++A+Y PLL+K+ ++
Sbjct: 766 GLPLMNRKLRIAEYEPLLEKITARF 790
Score = 25.0 bits (53), Expect(2) = 1e-11
Identities = 11/19 (57%), Positives = 13/19 (68%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSV 59
HL FADD+MIF G S+
Sbjct: 694 HLMFADDVMIFFDGGSFSL 712
>gb|AAD15471.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1277
Score = 61.2 bits (147), Expect(3) = 2e-11
Identities = 32/71 (45%), Positives = 42/71 (59%)
Frame = +1
Query: 70 DVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLK 249
++ ++ SGL + KS ++LA V E R+ IL F G +P RYLG PL K +
Sbjct: 865 NIFKDFAGKSGLHISLEKSTLYLAEVSELNRNNILSAFPFASGQLPVRYLGFPLLTKQMT 924
Query: 250 VADYSPLLDKV 282
ADYSPLLDKV
Sbjct: 925 TADYSPLLDKV 935
Score = 27.3 bits (59), Expect(3) = 2e-11
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL FADDLM+F G SV+
Sbjct: 842 HLCFADDLMVFIDGQQRSVE 861
Score = 24.6 bits (52), Expect(3) = 2e-11
Identities = 10/21 (47%), Positives = 16/21 (76%)
Frame = +3
Query: 291 ILAWSGFNLSYAGRVEVICSI 353
I +W+ +LSYAGR+ +I S+
Sbjct: 939 ISSWTARSLSYAGRLALINSV 959
>gb|AAF99785.1|AC012463_2 T2E6.4 [Arabidopsis thaliana]
Length = 740
Score = 66.2 bits (160), Expect(2) = 3e-11
Identities = 34/71 (47%), Positives = 44/71 (61%)
Frame = +1
Query: 70 DVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLK 249
++ +E SGL + KS ++LAGV E R+ IL F G +P RYLG+PL K +
Sbjct: 296 NIFKEFAGKSGLHISLEKSTLYLAGVSELNRNNILSAFPFASGQLPVRYLGLPLLTKQMT 355
Query: 250 VADYSPLLDKV 282
ADYSPLLDKV
Sbjct: 356 TADYSPLLDKV 366
Score = 27.3 bits (59), Expect(2) = 3e-11
Identities = 12/20 (60%), Positives = 14/20 (70%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL FADDLM+F G SV+
Sbjct: 273 HLCFADDLMVFIDGQQRSVE 292
>ref|XP_006582615.1| PREDICTED: uncharacterized protein LOC102665746 [Glycine max]
Length = 506
Score = 63.5 bits (153), Expect(2) = 3e-11
Identities = 30/88 (34%), Positives = 50/88 (56%)
Frame = +1
Query: 79 QELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLKVAD 258
+ +A+GL N K ++ AG++ + +IL+ GF G +P +YLG+P++ K L
Sbjct: 97 ESFSKATGLLVNPQKCSLLCAGIDAVTKREILEVSGFQEGQLPFKYLGVPVTSKKLSTIH 156
Query: 259 YSPLLDKVAGQYLHGRASISHMPVELKL 342
YSPL+DK+ G+ H A + L+L
Sbjct: 157 YSPLIDKIVGKIKHWTARLLSYAGRLQL 184
Score = 30.0 bits (66), Expect(2) = 3e-11
Identities = 12/19 (63%), Positives = 17/19 (89%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSV 59
+L FADDL++F+RGD +SV
Sbjct: 71 NLCFADDLLLFSRGDKISV 89
>ref|XP_006579104.1| PREDICTED: uncharacterized protein LOC102661523 [Glycine max]
Length = 947
Score = 59.7 bits (143), Expect(2) = 5e-11
Identities = 29/95 (30%), Positives = 49/95 (51%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G + S + V+ + +GL N K I+ GV+ ++KI + G +P RYL
Sbjct: 526 GDVMSVEMMLHVINKFSATTGLVVNPNKCRIYFGGVDGTTKNKIQQISSYEEGQLPVRYL 585
Query: 220 GIPLSGKYLKVADYSPLLDKVAGQYLHGRASISHM 324
G+PL+ K L + Y PL+DK+ + H + + +M
Sbjct: 586 GVPLTSKKLNIKYYLPLIDKITTRIRHWTSKLLNM 620
Score = 33.1 bits (74), Expect(2) = 5e-11
Identities = 12/22 (54%), Positives = 19/22 (86%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVKIV 68
HL FADD+++F RGD +SV+++
Sbjct: 513 HLTFADDVLLFCRGDVMSVEMM 534
>ref|XP_004293181.1| PREDICTED: uncharacterized protein LOC101298394 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 59.7 bits (143), Expect(3) = 1e-10
Identities = 31/73 (42%), Positives = 42/73 (57%)
Frame = +1
Query: 64 LCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKY 243
L D S L AN +S IFLAGV+ + +L F++G+ P RYLGIPL
Sbjct: 543 LHDAFSNFESLSSLKANVSESKIFLAGVDGNSSDSVLQVTNFSLGTCPVRYLGIPLITSK 602
Query: 244 LKVADYSPLLDKV 282
L++ D SPLLD++
Sbjct: 603 LRMQDCSPLLDRI 615
Score = 28.9 bits (63), Expect(3) = 1e-10
Identities = 12/20 (60%), Positives = 15/20 (75%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL FADDL++F GD SV+
Sbjct: 522 HLCFADDLLMFCNGDENSVR 541
Score = 22.3 bits (46), Expect(3) = 1e-10
Identities = 9/21 (42%), Positives = 15/21 (71%)
Frame = +3
Query: 291 ILAWSGFNLSYAGRVEVICSI 353
I +W LS+AGR+++I S+
Sbjct: 619 IKSWENKVLSFAGRLQLIQSV 639
>emb|CAA18234.1| putative protein [Arabidopsis thaliana] gi|7269488|emb|CAB79491.1|
putative protein [Arabidopsis thaliana]
Length = 1141
Score = 71.2 bits (173), Expect = 1e-10
Identities = 37/95 (38%), Positives = 57/95 (60%)
Frame = +1
Query: 64 LCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKY 243
+C+ L++ SGL N+ KS+ F AG+E+ ER+ + Y GF G +P RYLG+PL +
Sbjct: 693 ICETLEDFASWSGLKVNNDKSHFFCAGLEQAERNSLAAY-GFPQGCLPIRYLGLPLMCRK 751
Query: 244 LKVADYSPLLDKVAGQYLHGRASISHMPVELKLFV 348
L++A+Y PLL+K HG+ + VE L +
Sbjct: 752 LRIAEYEPLLEKSPKNSDHGQQIVYLTQVEFNLLL 786
>ref|XP_006590026.1| PREDICTED: uncharacterized protein LOC102660482 [Glycine max]
Length = 303
Score = 62.4 bits (150), Expect(2) = 1e-10
Identities = 34/83 (40%), Positives = 45/83 (54%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G I S S + LQ GL +S KS+I+ + + HE S I GF++G P RYL
Sbjct: 36 GDIPSMSTMFAKLQHFCRVLGLSISSDKSSIYSSSIRTHELSHIQQLTGFSLGGFPFRYL 95
Query: 220 GIPLSGKYLKVADYSPLLDKVAG 288
G+PL L V Y+PLL K+ G
Sbjct: 96 GVPLLSSRLNVCHYAPLLSKITG 118
Score = 28.9 bits (63), Expect(2) = 1e-10
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSV 59
HLAF DD+M+ +RGD S+
Sbjct: 23 HLAFVDDIMLLSRGDIPSM 41
>gb|ABD96948.1| hypothetical protein [Cleome spinosa]
Length = 539
Score = 59.7 bits (143), Expect(3) = 2e-10
Identities = 32/71 (45%), Positives = 42/71 (59%)
Frame = +1
Query: 70 DVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLK 249
+ L ASGL N+ K+ IFL G+ E S + +GFT G +P RYLG+ LS L
Sbjct: 170 NTLDSFSRASGLYLNTEKTEIFLRGLNGTEASTLCAVIGFTRGYLPVRYLGVSLSPVRLT 229
Query: 250 VADYSPLLDKV 282
+DY PLLD+V
Sbjct: 230 KSDYQPLLDRV 240
Score = 28.9 bits (63), Expect(3) = 2e-10
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSV 59
HLAFADD+MIF G+ S+
Sbjct: 147 HLAFADDIMIFTSGETRSL 165
Score = 21.9 bits (45), Expect(3) = 2e-10
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +3
Query: 291 ILAWSGFNLSYAGRVEVICSI 353
I +W+ LSYAGR++++ ++
Sbjct: 244 INSWTTRYLSYAGRLQLVGTV 264
>gb|AAG51098.1|AC025295_6 hypothetical protein [Arabidopsis thaliana]
Length = 504
Score = 59.7 bits (143), Expect(3) = 2e-10
Identities = 28/81 (34%), Positives = 44/81 (54%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G + S + DV + S L + KS ++LAG+ R +++D F +G++P RYL
Sbjct: 43 GKVRSIEGIVDVFDTFAKCSDLKISMEKSTVYLAGLSHTTRQEVIDRFSFAVGTLPVRYL 102
Query: 220 GIPLSGKYLKVADYSPLLDKV 282
G+PL K DY PL+D +
Sbjct: 103 GLPLVTKQFSSTDYLPLIDHI 123
Score = 26.2 bits (56), Expect(3) = 2e-10
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL+FADDLM+ + G S++
Sbjct: 30 HLSFADDLMVLSDGKVRSIE 49
Score = 24.6 bits (52), Expect(3) = 2e-10
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +3
Query: 291 ILAWSGFNLSYAGRVEVICSI 353
I +WS LSY GR+ +I SI
Sbjct: 127 ICSWSARFLSYTGRLNLISSI 147
>dbj|BAB09379.1| non-LTR retroelement reverse transcriptase-like protein
[Arabidopsis thaliana]
Length = 1223
Score = 58.5 bits (140), Expect(3) = 2e-10
Identities = 32/81 (39%), Positives = 46/81 (56%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G I S R+ V E + SGL + KS ++LAG+ R+++ D F+ G +P RYL
Sbjct: 713 GKIRSIERIIKVFDEFAKWSGLRISLEKSTVYLAGLSATARNEVADRFPFSSGQLPVRYL 772
Query: 220 GIPLSGKYLKVADYSPLLDKV 282
G+PL K L D PLL++V
Sbjct: 773 GLPLITKRLSTTDCLPLLEQV 793
Score = 26.6 bits (57), Expect(3) = 2e-10
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL+FADDLM+ + G S++
Sbjct: 700 HLSFADDLMVLSDGKIRSIE 719
Score = 25.0 bits (53), Expect(3) = 2e-10
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = +3
Query: 264 PSFGQGGRTILAWSGFNLSYAGRVEVICSI 353
P Q + I +W+ LSYAGR+ +I S+
Sbjct: 788 PLLEQVRKRIGSWTSRFLSYAGRLNLISSV 817
>gb|AAC63678.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1216
Score = 60.5 bits (145), Expect(3) = 2e-10
Identities = 31/81 (38%), Positives = 45/81 (55%)
Frame = +1
Query: 40 GVIFSQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYL 219
G I S + VL + GL K+ ++LAGV +H R + F +G +P RYL
Sbjct: 434 GKIRSVDGIVKVLNQFAAKLGLKICMEKTTLYLAGVSDHSRQLMSSRYSFGVGKLPVRYL 493
Query: 220 GIPLSGKYLKVADYSPLLDKV 282
G+PL K L +DYSPL+D++
Sbjct: 494 GLPLVTKRLTTSDYSPLIDQI 514
Score = 26.2 bits (56), Expect(3) = 2e-10
Identities = 12/19 (63%), Positives = 12/19 (63%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSV 59
HL FADDLMI G SV
Sbjct: 421 HLCFADDLMILTDGKIRSV 439
Score = 23.5 bits (49), Expect(3) = 2e-10
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = +3
Query: 264 PSFGQGGRTILAWSGFNLSYAGRVEVICSI 353
P Q R I W+ LS+AGR+ +I S+
Sbjct: 509 PLIDQIRRRIGMWTSRYLSFAGRLSLINSV 538
>gb|AAC33226.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1529
Score = 58.9 bits (141), Expect(3) = 2e-10
Identities = 31/71 (43%), Positives = 42/71 (59%)
Frame = +1
Query: 70 DVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLK 249
+V +E SGL + KS I+LAGV +R + L F G +P RYLG+PL K +
Sbjct: 1020 NVFKEFAGRSGLQISLEKSTIYLAGVSASDRVQTLSSFPFANGQLPVRYLGLPLLTKQMT 1079
Query: 250 VADYSPLLDKV 282
ADYSPL++ V
Sbjct: 1080 TADYSPLIEAV 1090
Score = 26.9 bits (58), Expect(3) = 2e-10
Identities = 11/20 (55%), Positives = 14/20 (70%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL FADDLM+F G S++
Sbjct: 997 HLCFADDLMVFVDGHQWSIE 1016
Score = 23.9 bits (50), Expect(3) = 2e-10
Identities = 9/21 (42%), Positives = 16/21 (76%)
Frame = +3
Query: 291 ILAWSGFNLSYAGRVEVICSI 353
I +W+ +LSYAGR+ ++ S+
Sbjct: 1094 ISSWTARSLSYAGRLALLNSV 1114
>gb|AAD22330.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 631
Score = 64.3 bits (155), Expect(2) = 4e-10
Identities = 32/70 (45%), Positives = 41/70 (58%)
Frame = +1
Query: 70 DVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLK 249
++ E SGL + KS ++LAGV E R IL F G +P RYLG+PL K +
Sbjct: 293 NIFHEFAGKSGLHISLEKSTLYLAGVSEPNRDHILSAFSFASGQLPVRYLGLPLMTKQMT 352
Query: 250 VADYSPLLDK 279
ADYSPL+DK
Sbjct: 353 TADYSPLIDK 362
Score = 25.4 bits (54), Expect(2) = 4e-10
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 3 HLAFADDLMIFARGDFLSVK 62
HL F DDLM+F G S++
Sbjct: 270 HLCFVDDLMVFIDGQQRSIE 289
>emb|CCA65979.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1110
Score = 59.7 bits (143), Expect(3) = 4e-10
Identities = 27/71 (38%), Positives = 43/71 (60%)
Frame = +1
Query: 79 QELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLKVAD 258
Q+ ASGL A+ KSNI+ GV++ ++ DY+ +G +P RYLG+PL+ K L A
Sbjct: 711 QKFSHASGLAASHEKSNIYFCGVDDETARELADYVHMQLGELPFRYLGVPLTSKKLTYAQ 770
Query: 259 YSPLLDKVAGQ 291
PL++ + +
Sbjct: 771 CKPLVEMITNR 781
Score = 26.6 bits (57), Expect(3) = 4e-10
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +3
Query: 3 HLAFADDLMIFARGD 47
HL FADDL++F R D
Sbjct: 685 HLMFADDLLMFCRAD 699
Score = 22.7 bits (47), Expect(3) = 4e-10
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +3
Query: 300 WSGFNLSYAGRVEVICSI 353
W LSYAGR+++I SI
Sbjct: 785 WMAKLLSYAGRLQLIKSI 802
>ref|XP_006584390.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Glycine
max]
Length = 316
Score = 59.7 bits (143), Expect(2) = 5e-10
Identities = 32/71 (45%), Positives = 40/71 (56%)
Frame = +1
Query: 76 LQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPLSGKYLKVA 255
LQ SGL +S KS I+ AG+ +E S I GF++G P RYLG PL L V
Sbjct: 81 LQHFCRVSGLSISSDKSAIYSAGIRPYELSHIQQLTGFSLGGFPFRYLGAPLLSSRLNVC 140
Query: 256 DYSPLLDKVAG 288
Y+PLL K+ G
Sbjct: 141 HYAPLLYKIVG 151
Score = 29.6 bits (65), Expect(2) = 5e-10
Identities = 11/15 (73%), Positives = 14/15 (93%)
Frame = +3
Query: 3 HLAFADDLMIFARGD 47
HLAFADD+M+ +RGD
Sbjct: 56 HLAFADDIMLLSRGD 70
>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
thaliana]
Length = 1072
Score = 64.7 bits (156), Expect(2) = 7e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 52 SQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPL 231
S +C+ L + + SGL N KS +F AG++ ER Y GF G+ P RYLG+PL
Sbjct: 571 SMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSERITSAAY-GFPAGTFPIRYLGLPL 629
Query: 232 SGKYLKVADYSPLLDKVAGQ 291
+ L++ADY PLL+K++ +
Sbjct: 630 MCRKLRIADYGPLLEKLSAR 649
Score = 24.3 bits (51), Expect(2) = 7e-10
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 3 HLAFADDLMIFARG 44
HL FADD+MIF G
Sbjct: 554 HLMFADDVMIFFDG 567
>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
Length = 1072
Score = 64.7 bits (156), Expect(2) = 7e-10
Identities = 33/80 (41%), Positives = 49/80 (61%)
Frame = +1
Query: 52 SQSRLCDVLQELGEASGL*ANSLKSNIFLAGVEEHERSKILDYMGFTIGSMPSRYLGIPL 231
S +C+ L + + SGL N KS +F AG++ ER Y GF G+ P RYLG+PL
Sbjct: 571 SMHGICETLDDFADWSGLKVNKDKSQLFQAGLDLSERITSAAY-GFPAGTFPIRYLGLPL 629
Query: 232 SGKYLKVADYSPLLDKVAGQ 291
+ L++ADY PLL+K++ +
Sbjct: 630 MCRKLRIADYGPLLEKLSAR 649
Score = 24.3 bits (51), Expect(2) = 7e-10
Identities = 10/14 (71%), Positives = 11/14 (78%)
Frame = +3
Query: 3 HLAFADDLMIFARG 44
HL FADD+MIF G
Sbjct: 554 HLMFADDVMIFFDG 567