BLASTX nr result
ID: Catharanthus23_contig00028260
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028260
(294 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA94593.2| retrotransposon protein, putative, unclassified [... 65 2e-10
gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japo... 65 2e-10
ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group] g... 62 9e-10
gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indi... 63 3e-09
gb|ABA98898.1| retrotransposon protein, putative, unclassified [... 59 9e-09
gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japo... 59 9e-09
ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] g... 61 2e-08
gb|AAP54692.2| retrotransposon protein, putative, unclassified [... 60 2e-08
gb|AAO00713.1| retrotransposon protein, putative, unclassified [... 60 2e-08
gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japo... 61 2e-08
gb|EEC68693.1| hypothetical protein OsI_37162 [Oryza sativa Indi... 61 2e-08
gb|EAZ45614.1| hypothetical protein OsJ_30281 [Oryza sativa Japo... 59 3e-08
gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japo... 60 3e-08
gb|EEE65703.1| hypothetical protein OsJ_21337 [Oryza sativa Japo... 60 3e-08
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 57 3e-08
gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japo... 57 3e-08
emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group] 57 3e-08
gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japo... 58 3e-08
gb|EEC84864.1| hypothetical protein OsI_31997 [Oryza sativa Indi... 58 3e-08
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta... 59 4e-08
>gb|ABA94593.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1469
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI IK P +KDYRPI LCN++YK+VSK +VNRL+PF+ ++ + SAFV
Sbjct: 904 LIPKIKQPTQLKDYRPISLCNVIYKVVSKCLVNRLRPFLDELVSPNQSAFV 954
Score = 25.8 bits (55), Expect(2) = 2e-10
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 71 FC*KRLINDSFIVAFEAFH 15
F +RLI D+ +VAFE FH
Sbjct: 953 FVPERLITDNALVAFECFH 971
>gb|EEE52364.1| hypothetical protein OsJ_34428 [Oryza sativa Japonica Group]
Length = 1102
Score = 64.7 bits (156), Expect(2) = 2e-10
Identities = 29/51 (56%), Positives = 39/51 (76%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI IK P +KDYRPI LCN++YK+VSK +VNRL+PF+ ++ + SAFV
Sbjct: 911 LIPKIKQPTQLKDYRPISLCNVIYKVVSKCLVNRLRPFLDELVSPNQSAFV 961
Score = 25.8 bits (55), Expect(2) = 2e-10
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = -2
Query: 71 FC*KRLINDSFIVAFEAFH 15
F +RLI D+ +VAFE FH
Sbjct: 960 FVPERLITDNALVAFECFH 978
>ref|NP_001175161.1| Os07g0417700 [Oryza sativa Japonica Group]
gi|255677700|dbj|BAH93889.1| Os07g0417700 [Oryza sativa
Japonica Group]
Length = 1011
Score = 62.0 bits (149), Expect(2) = 9e-10
Identities = 28/51 (54%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P VKD+RPI LCN++YK VSK +VNRL+P + ++ S SAFV
Sbjct: 183 LIPKIEQPMEVKDFRPISLCNVLYKFVSKCLVNRLRPILDELVSQSQSAFV 233
Score = 26.6 bits (57), Expect(2) = 9e-10
Identities = 11/17 (64%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
RLI D+ I+AFE FHS+
Sbjct: 236 RLITDNAILAFECFHSI 252
>gb|EEC83406.1| hypothetical protein OsI_28856 [Oryza sativa Indica Group]
Length = 1143
Score = 62.8 bits (151), Expect(2) = 3e-09
Identities = 27/52 (51%), Positives = 39/52 (75%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFVE 62
LI I+ P +KDYRPI LCN++YK+VSK +VNRL+P + V+ + SAF++
Sbjct: 423 LIPKIEQPLELKDYRPISLCNVVYKVVSKCLVNRLRPVLDEVVSEEQSAFIQ 474
Score = 23.9 bits (50), Expect(2) = 3e-09
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FH++
Sbjct: 476 RMITDNALLAFECFHAI 492
>gb|ABA98898.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1188
Score = 59.3 bits (142), Expect(2) = 9e-09
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI + P ++DYRPI LCN++YK+VSK +VNRL+P + +I + SAFV
Sbjct: 355 LIPKVDQPIELRDYRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFV 405
Score = 25.8 bits (55), Expect(2) = 9e-09
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FHS+
Sbjct: 408 RMITDNALIAFECFHSI 424
>gb|EAZ20803.1| hypothetical protein OsJ_36426 [Oryza sativa Japonica Group]
Length = 787
Score = 59.3 bits (142), Expect(2) = 9e-09
Identities = 26/51 (50%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI + P ++DYRPI LCN++YK+VSK +VNRL+P + +I + SAFV
Sbjct: 355 LIPKVDQPIELRDYRPISLCNVLYKVVSKCLVNRLRPILDELISPNQSAFV 405
Score = 25.8 bits (55), Expect(2) = 9e-09
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FHS+
Sbjct: 408 RMITDNALIAFECFHSI 424
>ref|NP_001176302.1| Os11g0106066 [Oryza sativa Japonica Group] gi|77548275|gb|ABA91072.1|
retrotransposon protein, putative, unclassified [Oryza
sativa Japonica Group] gi|255679693|dbj|BAH95030.1|
Os11g0106066 [Oryza sativa Japonica Group]
Length = 1690
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P +KD+RPI LCN++YK+VSK +VNRL+P ++ ++ + SAFV
Sbjct: 1097 LIPKIEQPMELKDFRPISLCNVLYKVVSKCLVNRLRPMLNELVSEEQSAFV 1147
Score = 23.1 bits (48), Expect(2) = 2e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 59 RLINDSFIVAFEAFH 15
R+I D+ ++AFE FH
Sbjct: 1150 RMITDNALLAFECFH 1164
>gb|AAP54692.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1585
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFVER 59
LI I+ P ++D+RPI LCN++YK++SK +VNRL+PF+ +I + SAFV R
Sbjct: 907 LIPKIEQPRDLRDFRPISLCNVIYKVLSKCLVNRLRPFLDELISKNQSAFVPR 959
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 71 FC*KRLINDSFIVAFEAFH 15
F +R+I D+ ++AFE FH
Sbjct: 956 FVPRRMITDNALLAFECFH 974
>gb|AAO00713.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1557
Score = 59.7 bits (143), Expect(2) = 2e-08
Identities = 27/53 (50%), Positives = 40/53 (75%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFVER 59
LI I+ P ++D+RPI LCN++YK++SK +VNRL+PF+ +I + SAFV R
Sbjct: 879 LIPKIEQPRDLRDFRPISLCNVIYKVLSKCLVNRLRPFLDELISKNQSAFVPR 931
Score = 24.3 bits (51), Expect(2) = 2e-08
Identities = 9/19 (47%), Positives = 14/19 (73%)
Frame = -2
Query: 71 FC*KRLINDSFIVAFEAFH 15
F +R+I D+ ++AFE FH
Sbjct: 928 FVPRRMITDNALLAFECFH 946
>gb|EEE51498.1| hypothetical protein OsJ_32653 [Oryza sativa Japonica Group]
Length = 1322
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P +KD+RPI LCN++YK+VSK +VNRL+P ++ ++ + SAFV
Sbjct: 1076 LIPKIEQPMELKDFRPISLCNVLYKVVSKCLVNRLRPMLNELVSEEQSAFV 1126
Score = 23.1 bits (48), Expect(2) = 2e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 59 RLINDSFIVAFEAFH 15
R+I D+ ++AFE FH
Sbjct: 1129 RMITDNALLAFECFH 1143
>gb|EEC68693.1| hypothetical protein OsI_37162 [Oryza sativa Indica Group]
Length = 1283
Score = 60.8 bits (146), Expect(2) = 2e-08
Identities = 26/51 (50%), Positives = 39/51 (76%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P +KD+RPI LCN++YK+VSK +VNRL+P ++ ++ + SAFV
Sbjct: 948 LIPKIEQPMELKDFRPISLCNVLYKVVSKCLVNRLRPMLNELVSEEQSAFV 998
Score = 23.1 bits (48), Expect(2) = 2e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 59 RLINDSFIVAFEAFH 15
R+I D+ ++AFE FH
Sbjct: 1001 RMITDNALLAFECFH 1015
>gb|EAZ45614.1| hypothetical protein OsJ_30281 [Oryza sativa Japonica Group]
Length = 1068
Score = 58.5 bits (140), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 38/51 (74%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI + P +K++RPI+LCN++YK+VSK +VNRL+P + +I + SAFV
Sbjct: 700 LIPKVNQPMELKEFRPINLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFV 750
Score = 25.0 bits (53), Expect(2) = 3e-08
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FHS+
Sbjct: 753 RMITDNALLAFECFHSI 769
>gb|EEE51936.1| hypothetical protein OsJ_33562 [Oryza sativa Japonica Group]
Length = 419
Score = 59.7 bits (143), Expect(2) = 3e-08
Identities = 26/52 (50%), Positives = 38/52 (73%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFVE 62
LI I+ P +KDYRPI LCN++YK+VSK +VNRL+P + V+ + SA ++
Sbjct: 104 LIPKIEQPLELKDYRPISLCNVVYKVVSKCLVNRLRPVLDEVVSEEQSASIQ 155
Score = 23.9 bits (50), Expect(2) = 3e-08
Identities = 8/17 (47%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FH++
Sbjct: 157 RMITDNALLAFECFHAI 173
>gb|EEE65703.1| hypothetical protein OsJ_21337 [Oryza sativa Japonica Group]
Length = 217
Score = 60.5 bits (145), Expect(2) = 3e-08
Identities = 26/51 (50%), Positives = 38/51 (74%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P +KD+RPI LCN++YK+VSK +VNRL+P + ++ + SAFV
Sbjct: 107 LIPKIEQPMELKDFRPISLCNVLYKVVSKCLVNRLRPMLDELVSEEQSAFV 157
Score = 23.1 bits (48), Expect(2) = 3e-08
Identities = 8/15 (53%), Positives = 12/15 (80%)
Frame = -2
Query: 59 RLINDSFIVAFEAFH 15
R+I D+ ++AFE FH
Sbjct: 160 RMITDNALLAFECFH 174
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 57.4 bits (137), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P ++D+RPI LCN++YK+VSK +VNRL+P + ++ SAFV
Sbjct: 496 LIPKIEQPMELRDFRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSAFV 546
Score = 57.4 bits (137), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI I+ P ++D+RPI LCN++YK+VSK +VNRL+P + ++ SAFV
Sbjct: 1194 LIPKIEQPMELRDFRPISLCNVIYKVVSKCLVNRLRPILDELVSPCQSAFV 1244
Score = 25.8 bits (55), Expect(2) = 3e-08
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ I+AFE FHS+
Sbjct: 549 RMITDNAILAFECFHSI 565
Score = 25.8 bits (55), Expect(2) = 3e-08
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ I+AFE FHS+
Sbjct: 1247 RMITDNAILAFECFHSI 1263
>gb|EEE61581.1| hypothetical protein OsJ_15963 [Oryza sativa Japonica Group]
Length = 1494
Score = 57.0 bits (136), Expect(2) = 3e-08
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
+I +P +KD+RP+ LCN++YK+V+K +VNRL+P + +I ++ SAFV
Sbjct: 743 MIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFV 793
Score = 26.2 bits (56), Expect(2) = 3e-08
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ +VAFE FHS+
Sbjct: 796 RMITDNALVAFECFHSI 812
>emb|CAE04866.2| OSJNBa0086O06.14 [Oryza sativa Japonica Group]
Length = 1205
Score = 57.0 bits (136), Expect(2) = 3e-08
Identities = 23/51 (45%), Positives = 38/51 (74%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
+I +P +KD+RP+ LCN++YK+V+K +VNRL+P + +I ++ SAFV
Sbjct: 479 MIPKTNAPVEMKDFRPVSLCNVIYKVVAKCLVNRLRPLLQEIISETQSAFV 529
Score = 26.2 bits (56), Expect(2) = 3e-08
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ +VAFE FHS+
Sbjct: 532 RMITDNALVAFECFHSI 548
>gb|EAZ45328.1| hypothetical protein OsJ_29974 [Oryza sativa Japonica Group]
Length = 469
Score = 58.2 bits (139), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI + P +K++RPI LCN++YK+VSK +VNRL+P + +I + SAFV
Sbjct: 174 LIPKVNQPMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFV 224
Score = 25.0 bits (53), Expect(2) = 3e-08
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FHS+
Sbjct: 227 RMITDNALLAFECFHSI 243
>gb|EEC84864.1| hypothetical protein OsI_31997 [Oryza sativa Indica Group]
Length = 401
Score = 58.2 bits (139), Expect(2) = 3e-08
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
LI + P +K++RPI LCN++YK+VSK +VNRL+P + +I + SAFV
Sbjct: 12 LISKVNRPMELKEFRPISLCNVIYKIVSKCLVNRLRPILDDLISQNQSAFV 62
Score = 25.0 bits (53), Expect(2) = 3e-08
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+I D+ ++AFE FHS+
Sbjct: 65 RMITDNALLAFECFHSI 81
>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1750
Score = 59.3 bits (142), Expect(2) = 4e-08
Identities = 25/51 (49%), Positives = 39/51 (76%)
Frame = -3
Query: 217 LILTIKSPFMVKDYRPIDLCNIMYKLVSKTIVNRLKPFMSSVIHDS*SAFV 65
+I I +P + DYRPI LCN++YK++SK +VNRLK ++S++ DS +AF+
Sbjct: 873 MIPKITNPTTLSDYRPIALCNVLYKVISKCLVNRLKSHLNSIVSDSQAAFI 923
Score = 23.5 bits (49), Expect(2) = 4e-08
Identities = 8/17 (47%), Positives = 13/17 (76%)
Frame = -2
Query: 59 RLINDSFIVAFEAFHSM 9
R+IND+ ++A E HS+
Sbjct: 926 RIINDNVMIAHEVMHSL 942