BLASTX nr result
ID: Catharanthus23_contig00028247
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028247
(416 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002520874.1| pentatricopeptide repeat-containing protein,... 154 2e-35
ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, part... 144 2e-32
ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containi... 140 2e-31
emb|CBI25349.3| unnamed protein product [Vitis vinifera] 140 2e-31
gb|EOY20071.1| Pentatricopeptide repeat-containing protein, puta... 139 5e-31
ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containi... 130 1e-28
ref|XP_004241092.1| PREDICTED: pentatricopeptide repeat-containi... 124 1e-26
ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arab... 124 2e-26
ref|NP_181604.1| pentatricopeptide repeat-containing protein [Ar... 121 1e-25
ref|XP_006295646.1| hypothetical protein CARUB_v10024761mg [Caps... 120 2e-25
ref|XP_006411338.1| hypothetical protein EUTSA_v10017587mg [Eutr... 120 2e-25
gb|EPS66960.1| hypothetical protein M569_07818 [Genlisea aurea] 112 4e-23
ref|XP_006842501.1| hypothetical protein AMTR_s00077p00100730 [A... 108 1e-21
gb|EOX93881.1| Tetratricopeptide repeat (TPR)-like superfamily p... 95 1e-17
gb|EMJ00280.1| hypothetical protein PRUPE_ppa019139mg [Prunus pe... 94 2e-17
gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula] 93 4e-17
ref|XP_003594983.1| Pentatricopeptide repeat-containing protein ... 93 4e-17
ref|XP_004242848.1| PREDICTED: pentatricopeptide repeat-containi... 92 5e-17
ref|XP_006366836.1| PREDICTED: pentatricopeptide repeat-containi... 92 7e-17
ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containi... 90 4e-16
>ref|XP_002520874.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223540005|gb|EEF41583.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 833
Score = 154 bits (388), Expect = 2e-35
Identities = 78/138 (56%), Positives = 101/138 (73%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L+ F+AME + +KPD +I ASII+ C L + HGFVIK GL D FV +SL++M
Sbjct: 428 LDFFRAMEADLVKPDSDIMASIISACTGLEKVDLGCTIHGFVIKSGLQLDVFVASSLLDM 487
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS++G PE GN+FSD+ KNLV WN +ISCYC+N L DLSI+L Q+++ LYP S+S
Sbjct: 488 YSKFGFPERAGNIFSDMPLKNLVAWNSIISCYCRNNLPDLSINLFSQVLRNDLYPDSVSF 547
Query: 54 TTVLMAISSVAALLKGKA 1
T+VL AISSVAALLKGK+
Sbjct: 548 TSVLAAISSVAALLKGKS 565
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/136 (24%), Positives = 66/136 (48%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+NLF + D+ PD S++ + +L HG++++ + D V +L++M
Sbjct: 529 INLFSQVLRNDLYPDSVSFTSVLAAISSVAALLKGKSVHGYLVRLWIPFDLQVENTLIDM 588
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G + ++F I KNLV WN +I Y +G +I L ++ G+ P ++
Sbjct: 589 YIKCGLLKYAQHIFERISEKNLVAWNSMIGGYGSHGECSKAIELFDEMRSSGIKPDDVTF 648
Query: 54 TTVLMAISSVAALLKG 7
++L + + + +G
Sbjct: 649 LSLLSSCNHSGLIEEG 664
Score = 55.5 bits (132), Expect = 7e-06
Identities = 33/95 (34%), Positives = 51/95 (53%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H IK G + DP+V TSL+ MY + E VF+++ K + +WN LIS Y NG +
Sbjct: 264 HCDAIKVGFEDDPYVHTSLLTMYGKCQMIESAEKVFNEVPDKEIELWNALISAYVGNGYA 323
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAAL 16
++ + Q+ + S +I VL + SS+A L
Sbjct: 324 YDALRIYKQMKLCTVLSDSFTILNVLTS-SSMAGL 357
>ref|XP_002319343.2| hypothetical protein POPTR_0013s09430g, partial [Populus
trichocarpa] gi|550325356|gb|EEE95266.2| hypothetical
protein POPTR_0013s09430g, partial [Populus trichocarpa]
Length = 792
Score = 144 bits (362), Expect = 2e-32
Identities = 71/138 (51%), Positives = 98/138 (71%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L + +M + KPD +I AS+++ C L ++ HG IK GL+ D FV +SL++M
Sbjct: 388 LEFYNSMTVYGEKPDSDIMASVVSACTGLKNVNLGCTIHGLAIKSGLEQDVFVASSLVDM 447
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS++ P++ GNVFSD+ KNLV WN +ISCYC+NGL DLSISL Q+ Q GL+P S+SI
Sbjct: 448 YSKFNFPKMSGNVFSDMPLKNLVAWNSIISCYCRNGLPDLSISLFSQMTQYGLFPDSVSI 507
Query: 54 TTVLMAISSVAALLKGKA 1
T+VL+++SSVA L KGKA
Sbjct: 508 TSVLVSVSSVAVLRKGKA 525
Score = 58.9 bits (141), Expect = 7e-07
Identities = 32/94 (34%), Positives = 50/94 (53%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H ++K G ++DP+V TSL+ MYS+ E NVF + K +WN +IS Y NG S
Sbjct: 224 HCDLVKLGFENDPYVCTSLLTMYSKCKLVEDAENVFDQVSVKKTELWNAMISAYVGNGRS 283
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAA 19
+ + Q+ + P S++ T VL + V +
Sbjct: 284 YDGLKIYKQMKVLQIPPDSLTATNVLSSCCLVGS 317
Score = 57.0 bits (136), Expect = 3e-06
Identities = 32/130 (24%), Positives = 68/130 (52%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L ++K M++ + PD A ++++ C +GS H ++KR + S+ + ++L+ M
Sbjct: 287 LKIYKQMKVLQIPPDSLTATNVLSSCCLVGSYDFGRLIHAELVKRPIQSNVALQSALLTM 346
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS+ G + ++F+ I +++V W +IS +CQN ++ + G P S +
Sbjct: 347 YSKCGNSDDANSIFNTIKGRDVVAWGSMISGFCQNRKYMEALEFYNSMTVYGEKPDSDIM 406
Query: 54 TTVLMAISSV 25
+V+ A + +
Sbjct: 407 ASVVSACTGL 416
>ref|XP_002275344.2| PREDICTED: pentatricopeptide repeat-containing protein At2g40720
[Vitis vinifera]
Length = 836
Score = 140 bits (353), Expect = 2e-31
Identities = 75/137 (54%), Positives = 98/137 (71%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L+LF+AME E +K D ++ S+I+ L ++ HGF IKRGL+SD FV SL++M
Sbjct: 431 LDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDM 490
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS++G E VFS + KNLV WN +ISCY NGL ++SI+LLPQI+Q G Y S+SI
Sbjct: 491 YSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSI 550
Query: 54 TTVLMAISSVAALLKGK 4
TTVL+A+SSVAALLKGK
Sbjct: 551 TTVLVAVSSVAALLKGK 567
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/126 (26%), Positives = 65/126 (51%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L L+ M+ + D +S+++ C +GS H VIKR + S+ + ++L+ M
Sbjct: 330 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTM 389
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G E +VF + +++V W +I+ +CQN ++ L + ++G+ S +
Sbjct: 390 YYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVM 449
Query: 54 TTVLMA 37
T+V+ A
Sbjct: 450 TSVISA 455
>emb|CBI25349.3| unnamed protein product [Vitis vinifera]
Length = 1241
Score = 140 bits (353), Expect = 2e-31
Identities = 75/137 (54%), Positives = 98/137 (71%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L+LF+AME E +K D ++ S+I+ L ++ HGF IKRGL+SD FV SL++M
Sbjct: 836 LDLFRAMEKEGVKADSDVMTSVISAGLGLENVELGHLIHGFAIKRGLESDVFVACSLVDM 895
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS++G E VFS + KNLV WN +ISCY NGL ++SI+LLPQI+Q G Y S+SI
Sbjct: 896 YSKFGFAESAEMVFSSMPNKNLVAWNSMISCYSWNGLPEMSINLLPQILQHGFYLDSVSI 955
Query: 54 TTVLMAISSVAALLKGK 4
TTVL+A+SSVAALLKGK
Sbjct: 956 TTVLVAVSSVAALLKGK 972
Score = 55.8 bits (133), Expect = 6e-06
Identities = 38/145 (26%), Positives = 68/145 (46%), Gaps = 12/145 (8%)
Frame = -3
Query: 402 KAMELEDMKPDPNIAA------SIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLM 241
+A+EL P + S++ C L +LY H ++ GL SDP++ TSL+
Sbjct: 424 QALELHSKTPHSALTTAKFTFPSLLKTCASLSNLYHGRTIHASIVTMGLQSDPYIATSLI 483
Query: 240 NMYSRYGQPELVGNVFS------DILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQG 79
NMY + G VF D P ++ VWN +I Y + G + ++ ++ + G
Sbjct: 484 NMYVKCGLLGSALQVFDKMSESRDSAP-DITVWNPVIDGYFKYGHFEEGLAQFCRMQELG 542
Query: 78 LYPGSISITTVLMAISSVAALLKGK 4
+ P S++ VL + ++ + G+
Sbjct: 543 IRPDGYSLSIVLGICNRLSWYMAGR 567
Score = 55.8 bits (133), Expect = 6e-06
Identities = 33/126 (26%), Positives = 65/126 (51%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L L+ M+ + D +S+++ C +GS H VIKR + S+ + ++L+ M
Sbjct: 735 LGLYNKMKAGETPVDSFTISSLLSGCSVVGSYDFGRTVHAEVIKRSMQSNVAIQSALLTM 794
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G E +VF + +++V W +I+ +CQN ++ L + ++G+ S +
Sbjct: 795 YYKCGSTEDADSVFYTMKERDVVAWGSMIAGFCQNRRFKDALDLFRAMEKEGVKADSDVM 854
Query: 54 TTVLMA 37
T+V+ A
Sbjct: 855 TSVISA 860
>gb|EOY20071.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
cacao]
Length = 849
Score = 139 bits (349), Expect = 5e-31
Identities = 66/137 (48%), Positives = 96/137 (70%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L+ F+ M+ ++PD +I +S+I+ C L ++ HG+V+K GL++D FV TSL++M
Sbjct: 444 LDYFRGMDANGVRPDSDIMSSVISACTGLENVDLGCMIHGYVVKSGLEADVFVATSLVDM 503
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS++G P++ N+F + KNLV WN ++SCYC+N L D SI L I+Q G YP S+SI
Sbjct: 504 YSKFGFPDMAENLFFHMPHKNLVAWNTIMSCYCRNSLPDQSIKLFSTIVQHGFYPDSVSI 563
Query: 54 TTVLMAISSVAALLKGK 4
TTVL A+SS+AALL GK
Sbjct: 564 TTVLAAVSSIAALLNGK 580
Score = 56.6 bits (135), Expect = 3e-06
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 5/143 (3%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGF-----VIKRGLDSDPFVGT 250
L L+ ++ E++K S ++ CG Y + G G +IK G +++ FV T
Sbjct: 242 LKLYSLVKCENVKLVSESFTSTLSACG-----YGDVVGFGRQVHCDLIKLGFENNHFVYT 296
Query: 249 SLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYP 70
SL+ MY + E VF +L K + VWN +IS + NG S + + ++ + P
Sbjct: 297 SLLTMYGKCQFVEDAEKVFYQVLDKGIEVWNAMISTFACNGYSYAAFEVYNKMRYNVINP 356
Query: 69 GSISITTVLMAISSVAALLKGKA 1
S +++ VL S + G++
Sbjct: 357 DSFTMSNVLSCSSMIGIYNVGRS 379
Score = 55.1 bits (131), Expect = 1e-05
Identities = 33/140 (23%), Positives = 73/140 (52%), Gaps = 3/140 (2%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCG---HGFVIKRGLDSDPFVGTSL 244
+ LF + PD + SI TV + S+ +L G HG++I+ + SD + +L
Sbjct: 545 IKLFSTIVQHGFYPD---SVSITTVLAAVSSIAALLNGKIIHGYLIRLEVQSDIQLENAL 601
Query: 243 MNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGS 64
++MY + G + +F ++ K++V WNC+++ Y +G ++SL ++ G+ P
Sbjct: 602 IDMYIKCGFLKYAEYIFQNMSQKDVVSWNCMLAGYGSHGDCLRALSLFDEMKNCGITPDD 661
Query: 63 ISITTVLMAISSVAALLKGK 4
++ +++ + + + +G+
Sbjct: 662 VTFLSLISSCNHAGLVDEGQ 681
>ref|XP_006358742.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Solanum tuberosum]
Length = 850
Score = 130 bits (328), Expect = 1e-28
Identities = 66/138 (47%), Positives = 90/138 (65%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L ++K ME + PD NI A +I L SL H +K G + D V SL++M
Sbjct: 447 LEIYKEMETHKVNPDANIMAMVINASAGLESLELGCSIHAITVKSGEEVDSSVSCSLVDM 506
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS G+PE+ VFS + KNLV WN LISCY +N L +LS++LLPQ++QQGLYP +++I
Sbjct: 507 YSNCGKPEMAEKVFSGVPHKNLVAWNSLISCYSKNDLPELSLNLLPQLVQQGLYPDAVTI 566
Query: 54 TTVLMAISSVAALLKGKA 1
T+ L A+SS+A L+KGKA
Sbjct: 567 TSALAAVSSLATLIKGKA 584
Score = 64.7 bits (156), Expect = 1e-08
Identities = 30/100 (30%), Positives = 57/100 (57%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H V+K ++DP+V TS+++MY+R+G E F+ +L K + VWN +IS Y G
Sbjct: 283 HSDVVKMDFENDPYVCTSVLSMYARFGLLEDADRAFNSVLNKEVEVWNSMISAYVGKGRG 342
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAALLKGKA 1
D ++ + ++ +G+ S +++ +L++ S + G A
Sbjct: 343 DDALCVYNEMRSRGILSDSFTLSNILISCSMTESYDLGSA 382
Score = 56.2 bits (134), Expect = 4e-06
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++LF+ M+ +K D + ++ + L HG+VI+ DPFV T+L++M
Sbjct: 143 MDLFRRMQEIGVKSDEYSLSILLGLFNGRMGLSKAKEVHGYVIRNSFGHDPFVVTALIDM 202
Query: 234 YSRYGQPELVGNVFSDILPK-NLVVWNCLISCYCQNGL 124
YS G+P+ VF + K N+V+WN LI +NGL
Sbjct: 203 YSNCGRPKDAWCVFESVQDKDNIVMWNALIRGLSENGL 240
>ref|XP_004241092.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g40720-like [Solanum lycopersicum]
Length = 850
Score = 124 bits (312), Expect = 1e-26
Identities = 62/138 (44%), Positives = 88/138 (63%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L ++K ME + PD NI A +I L SL H +K G + D V SL++M
Sbjct: 447 LEIYKEMETHKVNPDANIMAMLINASAGLESLELGCSIHAITVKSGEEVDSSVSCSLVDM 506
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS G+PE+ +FS + KNLV WN LISCY +N +LS++LLPQ++Q GLYP ++++
Sbjct: 507 YSNCGKPEMAEKIFSGVPHKNLVAWNSLISCYSKNDSPELSLNLLPQLVQHGLYPDAVTL 566
Query: 54 TTVLMAISSVAALLKGKA 1
T+ L A+SS+A L+KGKA
Sbjct: 567 TSALAAVSSLAILIKGKA 584
Score = 60.5 bits (145), Expect = 2e-07
Identities = 29/90 (32%), Positives = 50/90 (55%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H V+K ++DP+V TS+++MY+R G E FS L K + VWN +IS Y G
Sbjct: 283 HSDVVKMDFENDPYVCTSVLSMYARVGLLEEADRAFSSALDKEVEVWNSMISAYVGKGRG 342
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAIS 31
D + + + +G+ S +++ +L++ S
Sbjct: 343 DDAFCVYNVMRSRGILSDSFTLSNILISCS 372
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/127 (29%), Positives = 62/127 (48%), Gaps = 1/127 (0%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+ LF+ M+ +K D + ++ + L HG+VI+ DPFV T+L+++
Sbjct: 143 MGLFRRMQEIGVKSDEYSLSILLGLFNGRMGLSKAKEVHGYVIRNSFGHDPFVVTALIDI 202
Query: 234 YSRYGQPELVGNVFSDILPK-NLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSIS 58
YS G+P+ VF + K N+V+WN LI +NGL S+ L +G S +
Sbjct: 203 YSNCGRPKDAWCVFGSVQDKDNIVMWNALIRGLSENGLWRNSMRLYSLAKDRGCKLMSTT 262
Query: 57 ITTVLMA 37
+ L A
Sbjct: 263 FSCTLKA 269
>ref|XP_002879887.1| hypothetical protein ARALYDRAFT_903365 [Arabidopsis lyrata subsp.
lyrata] gi|297325726|gb|EFH56146.1| hypothetical protein
ARALYDRAFT_903365 [Arabidopsis lyrata subsp. lyrata]
Length = 1359
Score = 124 bits (310), Expect = 2e-26
Identities = 65/140 (46%), Positives = 96/140 (68%), Gaps = 2/140 (1%)
Frame = -3
Query: 414 LNLFKAMELED--MKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLM 241
L +F M+ +D +KPD +I S+I C L +L L HG +IK G + FVG+SL+
Sbjct: 958 LKVFGDMKDDDDSLKPDSDIMTSVINACAGLEALSFGLQVHGSMIKTGQVLNVFVGSSLI 1017
Query: 240 NMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSI 61
++YS+ G PE+ VF+ + P+N+V WN +ISCY +N L +LSI L ++ QG++P S+
Sbjct: 1018 DLYSKCGLPEMALKVFTSMRPENIVAWNSMISCYSRNNLPELSIELFNLMLSQGIFPDSV 1077
Query: 60 SITTVLMAISSVAALLKGKA 1
SIT+VL+AISS A+LLKGK+
Sbjct: 1078 SITSVLVAISSTASLLKGKS 1097
Score = 67.4 bits (163), Expect = 2e-09
Identities = 33/100 (33%), Positives = 56/100 (56%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H V+K GLD+DP+V TSL++MYS+ G VFS ++ K L +WN +++ Y +N
Sbjct: 794 HCDVVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYVENDNG 853
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAALLKGKA 1
++ L + Q+ + P S +++ V+ S GK+
Sbjct: 854 YSALELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKS 893
Score = 61.6 bits (148), Expect = 1e-07
Identities = 33/137 (24%), Positives = 67/137 (48%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+ LF M + + PD S++ SL HG+ ++ G+ SD + +L++M
Sbjct: 1061 IELFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDM 1120
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G + N+F + K+L+ WN +I Y +G ++SL ++ + G P ++
Sbjct: 1121 YVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCRTALSLFDELKKAGETPDDVTF 1180
Query: 54 TTVLMAISSVAALLKGK 4
+++ A + + +GK
Sbjct: 1181 LSLISACNHSGFVEEGK 1197
Score = 55.5 bits (132), Expect = 7e-06
Identities = 38/138 (27%), Positives = 65/138 (47%), Gaps = 2/138 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L LF M + + PD +++I+ C G H + KR + S P + ++L+ +
Sbjct: 857 LELFGFMRQKSVLPDSFTLSNVISCCSMFGLYDYGKSVHAELFKRPIQSTPAIESALLTL 916
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIM--QQGLYPGSI 61
YS+ G VF + K++V W LIS C+NG ++ + + L P S
Sbjct: 917 YSKCGCDTDAYLVFKSMEEKDMVAWGSLISGLCKNGKFKEALKVFGDMKDDDDSLKPDSD 976
Query: 60 SITTVLMAISSVAALLKG 7
+T+V+ A + + AL G
Sbjct: 977 IMTSVINACAGLEALSFG 994
>ref|NP_181604.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
gi|75276036|sp|Q7XJN6.1|PP197_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At2g40720 gi|330254774|gb|AEC09868.1| pentatricopeptide
repeat-containing protein [Arabidopsis thaliana]
Length = 860
Score = 121 bits (303), Expect = 1e-25
Identities = 64/140 (45%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
Frame = -3
Query: 414 LNLFKAMELED--MKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLM 241
L +F M+ +D +KPD +I S+ C L +L L HG +IK GL + FVG+SL+
Sbjct: 459 LKVFGDMKDDDDSLKPDSDIMTSVTNACAGLEALRFGLQVHGSMIKTGLVLNVFVGSSLI 518
Query: 240 NMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSI 61
++YS+ G PE+ VF+ + +N+V WN +ISCY +N L +LSI L ++ QG++P S+
Sbjct: 519 DLYSKCGLPEMALKVFTSMSTENMVAWNSMISCYSRNNLPELSIDLFNLMLSQGIFPDSV 578
Query: 60 SITTVLMAISSVAALLKGKA 1
SIT+VL+AISS A+LLKGK+
Sbjct: 579 SITSVLVAISSTASLLKGKS 598
Score = 65.5 bits (158), Expect = 7e-09
Identities = 32/100 (32%), Positives = 56/100 (56%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H V+K GL +DP+V TSL++MYS+ G VFS ++ K L +WN +++ Y +N
Sbjct: 295 HCDVVKMGLHNDPYVCTSLLSMYSKCGMVGEAETVFSCVVDKRLEIWNAMVAAYAENDYG 354
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAALLKGKA 1
++ L + Q+ + P S +++ V+ S + GK+
Sbjct: 355 YSALDLFGFMRQKSVLPDSFTLSNVISCCSVLGLYNYGKS 394
Score = 61.2 bits (147), Expect = 1e-07
Identities = 33/137 (24%), Positives = 68/137 (49%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++LF M + + PD S++ SL HG+ ++ G+ SD + +L++M
Sbjct: 562 IDLFNLMLSQGIFPDSVSITSVLVAISSTASLLKGKSLHGYTLRLGIPSDTHLKNALIDM 621
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G + N+F + K+L+ WN +I Y +G ++SL ++ + G P ++
Sbjct: 622 YVKCGFSKYAENIFKKMQHKSLITWNLMIYGYGSHGDCITALSLFDEMKKAGESPDDVTF 681
Query: 54 TTVLMAISSVAALLKGK 4
+++ A + + +GK
Sbjct: 682 LSLISACNHSGFVEEGK 698
>ref|XP_006295646.1| hypothetical protein CARUB_v10024761mg [Capsella rubella]
gi|482564354|gb|EOA28544.1| hypothetical protein
CARUB_v10024761mg [Capsella rubella]
Length = 858
Score = 120 bits (301), Expect = 2e-25
Identities = 64/140 (45%), Positives = 94/140 (67%), Gaps = 2/140 (1%)
Frame = -3
Query: 414 LNLFKAMELED--MKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLM 241
L +F++M+ ED +KPD +I S+I C L +L L HG +IK GL + FVG+SL+
Sbjct: 457 LKVFRSMKDEDDNLKPDSDIMTSVINACAGLEALRFGLQYHGGMIKTGLVLNVFVGSSLI 516
Query: 240 NMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSI 61
++YS+ G PE+ VF+ I N+V WN +ISCY +N L +LSI ++ QG++P S+
Sbjct: 517 DLYSKCGLPEMALKVFTSIRKDNIVAWNSMISCYSRNNLPELSIEHFNLMLSQGVFPDSV 576
Query: 60 SITTVLMAISSVAALLKGKA 1
SIT+VL+AISS A+ L GK+
Sbjct: 577 SITSVLVAISSTASFLSGKS 596
Score = 70.9 bits (172), Expect = 2e-10
Identities = 33/100 (33%), Positives = 57/100 (57%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H ++K GLD+DP+V TSL++MYS+ G VFS ++ K L +WN +I+ Y +N
Sbjct: 293 HCDIVKMGLDNDPYVSTSLLSMYSKCGMVGEAETVFSCVIDKRLEIWNAMIAAYVENDYG 352
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAALLKGKA 1
++ L + Q+ + P S +++ V+ S + GK+
Sbjct: 353 SSALELFGFMRQKSVLPDSFTLSNVISCCSMLGMYNYGKS 392
Score = 55.8 bits (133), Expect = 6e-06
Identities = 29/134 (21%), Positives = 64/134 (47%)
Frame = -3
Query: 405 FKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNMYSR 226
F M + + PD S++ S HG+ ++ + SD + +L++MY +
Sbjct: 563 FNLMLSQGVFPDSVSITSVLVAISSTASFLSGKSLHGYTLRLNIPSDSHLKNALIDMYLK 622
Query: 225 YGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISITTV 46
G + ++F + K+L+ WN +I Y +G ++SL ++ + G+ P ++ ++
Sbjct: 623 CGFSKYAEDIFKKMRHKSLITWNLMIYGYGSHGYCFRALSLFDEMKKAGVSPNEVTFLSL 682
Query: 45 LMAISSVAALLKGK 4
+ A + + +GK
Sbjct: 683 ISACNHSGFVKEGK 696
Score = 55.1 bits (131), Expect = 1e-05
Identities = 39/138 (28%), Positives = 66/138 (47%), Gaps = 2/138 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L LF M + + PD +++I+ C LG H + KR + S V ++L+ +
Sbjct: 356 LELFGFMRQKSVLPDSFTLSNVISCCSMLGMYNYGKSVHTELFKRPIQSTSTVDSALLTL 415
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQ--GLYPGSI 61
YS G VF + K++V W+ LIS C+NG ++ + + + L P S
Sbjct: 416 YSTCGCDTDADLVFKSMEGKDMVAWSSLISGLCKNGKFKEALKVFRSMKDEDDNLKPDSD 475
Query: 60 SITTVLMAISSVAALLKG 7
+T+V+ A + + AL G
Sbjct: 476 IMTSVINACAGLEALRFG 493
>ref|XP_006411338.1| hypothetical protein EUTSA_v10017587mg [Eutrema salsugineum]
gi|557112507|gb|ESQ52791.1| hypothetical protein
EUTSA_v10017587mg [Eutrema salsugineum]
Length = 858
Score = 120 bits (300), Expect = 2e-25
Identities = 62/140 (44%), Positives = 95/140 (67%), Gaps = 2/140 (1%)
Frame = -3
Query: 414 LNLFKAMELED--MKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLM 241
L +F++M+ +D +KPD +I S+I C L +L L HG + K GL + FVG+SL+
Sbjct: 457 LKVFESMKNDDDSLKPDSDIMTSVINACAGLEALDFGLQVHGGMTKTGLVLNVFVGSSLI 516
Query: 240 NMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSI 61
++YS+ G PE+ VF+ + P N+V WN +ISCY +N L + S+ L ++ G++P S+
Sbjct: 517 DLYSKCGLPEMALKVFTSMRPDNIVAWNSMISCYSRNNLPEQSMELFDLMLNHGVFPDSV 576
Query: 60 SITTVLMAISSVAALLKGKA 1
SIT+VL+AISS A+LLKGK+
Sbjct: 577 SITSVLVAISSTASLLKGKS 596
Score = 67.8 bits (164), Expect = 1e-09
Identities = 33/100 (33%), Positives = 55/100 (55%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
H V+K GLDSDP+V TSL++MYS+ G VFS ++ K L +WN +++ Y NG
Sbjct: 293 HCDVVKMGLDSDPYVCTSLLSMYSKCGMVGEAETVFSCVIDKRLEIWNAMVAAYADNGYG 352
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISSVAALLKGKA 1
++ L + + + S +++ V+ S + GK+
Sbjct: 353 HYALDLFSLMRENCVLSDSFTLSNVIACCSMLGLYDYGKS 392
Score = 55.1 bits (131), Expect = 1e-05
Identities = 31/137 (22%), Positives = 65/137 (47%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+ LF M + PD S++ SL HG+ ++ + SD + +L++M
Sbjct: 560 MELFDLMLNHGVFPDSVSITSVLVAISSTASLLKGKSVHGYTLRLNIPSDTHLKNALIDM 619
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G + N+F + K+L+ WN +I Y +G ++SL ++ + G P ++
Sbjct: 620 YVKCGFSKYAENIFRKMEHKSLITWNLMIYGYGSHGDCLRALSLFDEMKKAGESPDDVTF 679
Query: 54 TTVLMAISSVAALLKGK 4
+++ A + + +G+
Sbjct: 680 LSLISACNHSGFVQEGR 696
>gb|EPS66960.1| hypothetical protein M569_07818 [Genlisea aurea]
Length = 802
Score = 112 bits (281), Expect = 4e-23
Identities = 65/140 (46%), Positives = 87/140 (62%), Gaps = 2/140 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVC-GELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMN 238
L L AM +D+KPD NI A+ + G +G HGF +K GLDSDPF GT+L+
Sbjct: 444 LILLNAMLRDDVKPDSNILATALNASVGLVGFSI-----HGFAVKAGLDSDPFTGTALIE 498
Query: 237 MYSRYGQPELVGNVFSDILPKNLV-VWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSI 61
Y GQPE+ FSD++ KN+V VWN L+SCY NG+ +++I+LLPQ+ SI
Sbjct: 499 FYGNRGQPEMAHKSFSDVVDKNVVAVWNSLMSCYSLNGMPEIAIALLPQLP----CVDSI 554
Query: 60 SITTVLMAISSVAALLKGKA 1
S T L +IS ++ALL GKA
Sbjct: 555 SATVALSSISQISALLPGKA 574
Score = 56.6 bits (135), Expect = 3e-06
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 1/128 (0%)
Frame = -3
Query: 405 FKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNMYSR 226
F M ++KPD + ++ C ++ S + HG+ ++ + DPFV T++++MY
Sbjct: 145 FLRMVTANVKPDGYTLSILLGSCADISSGKEI---HGYALRNRCNDDPFVVTAMIDMYFG 201
Query: 225 YGQPELVGNVFSDILPK-NLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISITT 49
+ P VF K N+ VWN +I+ C NGL + L ++ L GS + +
Sbjct: 202 FRCPVDGWKVFEKSENKCNIAVWNSIINGCCHNGLFENGFQLFISAKREALPLGSTTFSI 261
Query: 48 VLMAISSV 25
L A S V
Sbjct: 262 SLTASSQV 269
>ref|XP_006842501.1| hypothetical protein AMTR_s00077p00100730 [Amborella trichopoda]
gi|548844587|gb|ERN04176.1| hypothetical protein
AMTR_s00077p00100730 [Amborella trichopoda]
Length = 548
Score = 108 bits (269), Expect = 1e-21
Identities = 58/138 (42%), Positives = 83/138 (60%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
LNL MEL +KPD I I++ C L +L HG+++K G SD FVGT++++M
Sbjct: 343 LNLMMEMELSGLKPDSAILTIILSSCASLEALALGTQMHGYIMKSGFSSDIFVGTAIIDM 402
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y++ G PEL G FSD+ NL WN +I + QN L + SI L ++QQGL P I+I
Sbjct: 403 YAKCGLPELAGIWFSDMKYTNLATWNAIICGFYQNSLPERSIELFMIMVQQGLEPDYITI 462
Query: 54 TTVLMAISSVAALLKGKA 1
T++ A + +A L GK+
Sbjct: 463 ATLISATARLATLKHGKS 480
Score = 66.2 bits (160), Expect = 4e-09
Identities = 32/91 (35%), Positives = 52/91 (57%)
Frame = -3
Query: 300 HGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLS 121
HGF+I+ + DPF+GT+LM Y +G NVF ++ +N V WN +I QN
Sbjct: 78 HGFIIRNSMLGDPFLGTNLMGFYFSFGDLNSATNVFHEMPERNFVSWNTIIGGLAQNEGM 137
Query: 120 DLSISLLPQIMQQGLYPGSISITTVLMAISS 28
S+ + +M++ + PGS + ++VL A S+
Sbjct: 138 GESLEMFKLMMREKIKPGSEAFSSVLTACSN 168
Score = 65.5 bits (158), Expect = 7e-09
Identities = 45/128 (35%), Positives = 63/128 (49%), Gaps = 2/128 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVC--GELGSLYPVLCGHGFVIKRGLDSDPFVGTSLM 241
L +FK M E +KP +S++T C GE + VL H + IK GL SD +V +SL+
Sbjct: 141 LEMFKLMMREKIKPGSEAFSSVLTACSNGEDSTFGSVL--HCYAIKHGLCSDSYVSSSLI 198
Query: 240 NMYSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSI 61
NMY ++ Q E VF++ K L WN +IS N L ++ L + G
Sbjct: 199 NMYGKFCQIENSWLVFNETPLKELGSWNSMISSCIYNNLGKKALELYKLMKFSGAKSDCF 258
Query: 60 SITTVLMA 37
SI L A
Sbjct: 259 SICNALSA 266
Score = 62.4 bits (150), Expect = 6e-08
Identities = 37/136 (27%), Positives = 69/136 (50%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L L+K M+ K D + ++ C +G HG + K+ + + V T+L+ M
Sbjct: 242 LELYKLMKFSGAKSDCFSICNALSACNLMGFSELGRVIHGELAKKPVQTHLGVRTALLTM 301
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS +G+ E +F+ I K+L W +I+ +C+ +++L+ ++ GL P S +
Sbjct: 302 YSNHGKLEEAMAIFNTIHSKDLTAWGAMIAGFCKEMKVSRALNLMMEMELSGLKPDSAIL 361
Query: 54 TTVLMAISSVAALLKG 7
T +L + +S+ AL G
Sbjct: 362 TIILSSCASLEALALG 377
>gb|EOX93881.1| Tetratricopeptide repeat (TPR)-like superfamily protein, putative
[Theobroma cacao]
Length = 597
Score = 94.7 bits (234), Expect = 1e-17
Identities = 50/138 (36%), Positives = 77/138 (55%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++L++ M++E M+ D + +I C LG L HGF+I++G D V TSL++M
Sbjct: 191 IDLYRNMQVEGMEGDGVVMLGLIQACANLGDSKLGLTIHGFMIRKGFSMDVVVQTSLVDM 250
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y++ G E VF I KN++ W LIS Y QNG + ++ LL ++ G P +S+
Sbjct: 251 YAKNGYLEYASRVFKKISSKNVISWGALISGYAQNGFARNALELLVEMQCYGFKPDLVSL 310
Query: 54 TTVLMAISSVAALLKGKA 1
+ LMA S V L GK+
Sbjct: 311 VSTLMACSQVGLLKLGKS 328
>gb|EMJ00280.1| hypothetical protein PRUPE_ppa019139mg [Prunus persica]
Length = 607
Score = 93.6 bits (231), Expect = 2e-17
Identities = 49/138 (35%), Positives = 79/138 (57%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++++K M+ E M+ D + ++ C LG L L HGF+I+ GL D V TSL++M
Sbjct: 191 VDMYKRMQNEGMEFDGVVLMGLVQACASLGDLRLGLSVHGFMIRTGLPMDVMVQTSLVHM 250
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y++ G EL VF+ + KN + W LIS + QNG + ++ +L ++ G P S+S+
Sbjct: 251 YAKSGHLELASCVFNKMPYKNAISWGALISGFAQNGFAGHALEMLVEMQGSGFEPDSVSL 310
Query: 54 TTVLMAISSVAALLKGKA 1
+ L+A S V L GK+
Sbjct: 311 VSALLACSQVGFLKLGKS 328
Score = 62.4 bits (150), Expect = 6e-08
Identities = 35/137 (25%), Positives = 69/137 (50%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L + M+ +PD S + C ++G L H +++K LD D +GT+L++M
Sbjct: 292 LEMLVEMQGSGFEPDSVSLVSALLACSQVGFLKLGKSTHAYILKM-LDFDEVLGTALIDM 350
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YS+ G +F I+ ++L+ WN +I+ Y +G + ++ L Q+ + + P +
Sbjct: 351 YSKCGSLSYARALFDQIVSRDLISWNAMIASYGIHGHGEEALVLFLQMTETNIKPDHATF 410
Query: 54 TTVLMAISSVAALLKGK 4
++L A S + +G+
Sbjct: 411 ASLLSAFSHSGLVGEGR 427
>gb|ABD33369.1| Tetratricopeptide-like helical [Medicago truncatula]
Length = 609
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/130 (34%), Positives = 76/130 (58%)
Frame = -3
Query: 393 ELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNMYSRYGQP 214
E +PD S++ CGELG L GFV++RG+ + ++G++L++MYS+ G+
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGEL 270
Query: 213 ELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISITTVLMAI 34
+F + ++ + WN IS Y QNG++D +ISL + + G+ P +++T VL A
Sbjct: 271 VSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSAC 330
Query: 33 SSVAALLKGK 4
+S+ AL GK
Sbjct: 331 ASIGALDLGK 340
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L+L+ M+ ++ P+ + C L + H V K GLD+D S++ M
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTM 161
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQ-GLYPGSIS 58
Y R G+ + VF +I K+LV WN L+S Y + G + ++ + ++ ++ G P +S
Sbjct: 162 YFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMS 221
Query: 57 ITTVLMAISSVAALLKGK 4
+ +VL A + L G+
Sbjct: 222 LVSVLGACGELGDLELGR 239
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++LF +M+ + P+ ++++ C +G+L + RGL D FV T+L++M
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQG--LYPGSI 61
Y++ G E VF+D+ KN WN +IS +G + ++SL ++ +G P I
Sbjct: 365 YAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDI 424
Query: 60 SITTVLMA 37
+ ++L A
Sbjct: 425 TFVSLLSA 432
>ref|XP_003594983.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
gi|355484031|gb|AES65234.1| Pentatricopeptide
repeat-containing protein [Medicago truncatula]
Length = 702
Score = 92.8 bits (229), Expect = 4e-17
Identities = 45/130 (34%), Positives = 76/130 (58%)
Frame = -3
Query: 393 ELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNMYSRYGQP 214
E +PD S++ CGELG L GFV++RG+ + ++G++L++MYS+ G+
Sbjct: 211 EESGFEPDEMSLVSVLGACGELGDLELGRWVEGFVVERGMKVNSYIGSALISMYSKCGEL 270
Query: 213 ELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISITTVLMAI 34
+F + ++ + WN IS Y QNG++D +ISL + + G+ P +++T VL A
Sbjct: 271 VSSRRIFDGMPSRDFITWNAAISAYAQNGMADEAISLFHSMKENGVDPNKVTLTAVLSAC 330
Query: 33 SSVAALLKGK 4
+S+ AL GK
Sbjct: 331 ASIGALDLGK 340
Score = 63.5 bits (153), Expect = 3e-08
Identities = 38/138 (27%), Positives = 68/138 (49%), Gaps = 1/138 (0%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L+L+ M+ ++ P+ + C L + H V K GLD+D S++ M
Sbjct: 102 LHLYHQMKTLNISPNNFTFPFVFLACANLEEIRMARLAHCEVFKLGLDNDHHTVNSMVTM 161
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQ-GLYPGSIS 58
Y R G+ + VF +I K+LV WN L+S Y + G + ++ + ++ ++ G P +S
Sbjct: 162 YFRCGENGVARKVFDEITEKDLVSWNSLLSGYAKLGFAREAVEVFGRLREESGFEPDEMS 221
Query: 57 ITTVLMAISSVAALLKGK 4
+ +VL A + L G+
Sbjct: 222 LVSVLGACGELGDLELGR 239
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/128 (28%), Positives = 67/128 (52%), Gaps = 2/128 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++LF +M+ + P+ ++++ C +G+L + RGL D FV T+L++M
Sbjct: 305 ISLFHSMKENGVDPNKVTLTAVLSACASIGALDLGKQMDEYATHRGLQHDIFVATALIDM 364
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQG--LYPGSI 61
Y++ G E VF+D+ KN WN +IS +G + ++SL ++ +G P I
Sbjct: 365 YAKCGSLESAQRVFNDMPRKNDASWNAMISALASHGKAKEALSLFERMSDEGGSARPNDI 424
Query: 60 SITTVLMA 37
+ ++L A
Sbjct: 425 TFVSLLSA 432
>ref|XP_004242848.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like isoform 1 [Solanum lycopersicum]
gi|460394517|ref|XP_004242849.1| PREDICTED:
pentatricopeptide repeat-containing protein
At2g34400-like isoform 2 [Solanum lycopersicum]
Length = 622
Score = 92.4 bits (228), Expect = 5e-17
Identities = 46/138 (33%), Positives = 79/138 (57%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+ LF M E +PD S++ CG+LG + +V+ + ++ + F+G++L+NM
Sbjct: 216 VGLFMEMRDEGFEPDERSLVSVLVACGDLGDVNLGKWVEEYVLGKRMEMNSFIGSALINM 275
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G +F + K+ + WN +IS Y QNGLSD +ISL + + G+ P +I++
Sbjct: 276 YGKCGDLVSARRIFDGMKKKDAITWNAMISGYAQNGLSDETISLFNAMKEAGVNPNNITL 335
Query: 54 TTVLMAISSVAALLKGKA 1
+VL A +S+ AL GK+
Sbjct: 336 VSVLSACASIGALDVGKS 353
Score = 72.4 bits (176), Expect = 6e-11
Identities = 44/137 (32%), Positives = 68/137 (49%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L + M+ +K D + CG L ++ H V+K GL D VG SL+ M
Sbjct: 115 LEFYHKMKSLGLKTDNFTYPFVFMCCGNLLAVKLGRLAHCEVVKNGLFVDFHVGHSLITM 174
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YSR+G+ VF +I ++LV WN +IS Y Q G S ++ L ++ +G P S+
Sbjct: 175 YSRFGKMGFARKVFDEISLRDLVSWNSMISGYAQTGCSREAVGLFMEMRDEGFEPDERSL 234
Query: 54 TTVLMAISSVAALLKGK 4
+VL+A + + GK
Sbjct: 235 VSVLVACGDLGDVNLGK 251
Score = 60.5 bits (145), Expect = 2e-07
Identities = 36/139 (25%), Positives = 69/139 (49%), Gaps = 2/139 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++LF AM+ + P+ S+++ C +G+L + +RG+ D +V T+L++M
Sbjct: 317 ISLFNAMKEAGVNPNNITLVSVLSACASIGALDVGKSIDDYASRRGIKYDIYVATALIDM 376
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQ--IMQQGLYPGSI 61
Y++ G+ + +F + KN V WN +IS +G + ++SL + + P +
Sbjct: 377 YAKSGKLDDAYQIFESMPRKNEVSWNAMISALAFHGRAQEALSLFERMSLKSSDARPDDV 436
Query: 60 SITTVLMAISSVAALLKGK 4
+ VL A + KGK
Sbjct: 437 TFVGVLSACVHAGLVDKGK 455
>ref|XP_006366836.1| PREDICTED: pentatricopeptide repeat-containing protein
At2g34400-like [Solanum tuberosum]
Length = 622
Score = 92.0 bits (227), Expect = 7e-17
Identities = 45/138 (32%), Positives = 79/138 (57%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+ LF M + +PD S++ CG+LG + +V+ + ++ + F+G++L+NM
Sbjct: 216 VGLFMEMRNDGFEPDERSLVSVLVACGDLGDVNLGKWVEEYVVGKRMEMNSFIGSALINM 275
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G +F + K+ + WN +IS Y QNGLSD +ISL + + G+ P +I++
Sbjct: 276 YGKCGDLVSARRIFDGMRKKDAITWNAMISGYAQNGLSDETISLFNAMKEAGVNPNNITL 335
Query: 54 TTVLMAISSVAALLKGKA 1
+VL A +S+ AL GK+
Sbjct: 336 VSVLSACASIGALDVGKS 353
Score = 71.6 bits (174), Expect = 1e-10
Identities = 44/137 (32%), Positives = 67/137 (48%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
L + M+ +K D + CG L ++ H V+K GL D VG SL+ M
Sbjct: 115 LEFYHKMKSLGLKTDNFTYPFVFMCCGNLLAVKLGGLAHCEVVKNGLFVDFHVGHSLITM 174
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
YSR+G+ VF +I ++LV WN +IS Y Q G S ++ L ++ G P S+
Sbjct: 175 YSRFGKMGFARKVFDEISQRDLVSWNSMISGYAQTGCSREAVGLFMEMRNDGFEPDERSL 234
Query: 54 TTVLMAISSVAALLKGK 4
+VL+A + + GK
Sbjct: 235 VSVLVACGDLGDVNLGK 251
Score = 58.9 bits (141), Expect = 7e-07
Identities = 35/139 (25%), Positives = 70/139 (50%), Gaps = 2/139 (1%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
++LF AM+ + P+ S+++ C +G+L + +RG+ D +V T+L++M
Sbjct: 317 ISLFNAMKEAGVNPNNITLVSVLSACASIGALDVGKSIDDYASRRGIRHDIYVATALIDM 376
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQG--LYPGSI 61
Y++ G+ + +F + KN V WN +IS +G + ++SL ++ + P +
Sbjct: 377 YAKSGKLDDAYQIFESMPRKNEVSWNAMISALAFHGRAQEALSLFERMSLESSDACPDDV 436
Query: 60 SITTVLMAISSVAALLKGK 4
+ VL A + +GK
Sbjct: 437 TFVGVLSACVHAGLVDQGK 455
>ref|XP_002266689.1| PREDICTED: pentatricopeptide repeat-containing protein At2g34400
[Vitis vinifera] gi|296090299|emb|CBI40118.3| unnamed
protein product [Vitis vinifera]
Length = 618
Score = 89.7 bits (221), Expect = 4e-16
Identities = 49/137 (35%), Positives = 76/137 (55%)
Frame = -3
Query: 414 LNLFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNM 235
+ LF M +PD SI+ CG+LG L GFV++ +D + FVG++L+ M
Sbjct: 212 VGLFGEMRDAGFEPDEMTLVSILGACGDLGDLGLGSWIEGFVVENEMDLNSFVGSALIGM 271
Query: 234 YSRYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISI 55
Y + G VF ++ K++V WN +I+ Y QNG+SD +I L + + G+ P I++
Sbjct: 272 YGKCGDLSSARRVFDRMVKKDVVTWNAMITGYAQNGVSDEAIILFSGMRESGVNPDKITL 331
Query: 54 TTVLMAISSVAALLKGK 4
VL A +S+ AL GK
Sbjct: 332 VGVLSACASIGALDFGK 348
Score = 64.7 bits (156), Expect = 1e-08
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = -3
Query: 408 LFKAMELEDMKPDPNIAASIITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNMYS 229
LF M + PD +++ C +G+L + +RGL +D +V T+L++MY+
Sbjct: 315 LFSGMRESGVNPDKITLVGVLSACASIGALDFGKWLDTYASERGLQNDIYVSTALIDMYA 374
Query: 228 RYGQPELVGNVFSDILPKNLVVWNCLISCYCQNGLSDLSISLLPQIMQQG--LYPGSISI 55
+ G + VF D+ KN V WN +IS +G S+SL ++ ++G + P IS
Sbjct: 375 KCGSLDDALRVFEDMPQKNEVSWNAMISALAFHGRPQESLSLFKRMSKEGGAVRPNDISF 434
Query: 54 TTVLMAISSVAALLKGK 4
VL A + +G+
Sbjct: 435 IGVLSACVHAGLVDEGR 451
Score = 63.5 bits (153), Expect = 3e-08
Identities = 36/112 (32%), Positives = 56/112 (50%)
Frame = -3
Query: 351 IITVCGELGSLYPVLCGHGFVIKRGLDSDPFVGTSLMNMYSRYGQPELVGNVFSDILPKN 172
+ C L L C H V+K GL +D V SL+ MYSR G+ VF +I K+
Sbjct: 132 VFIACANLLVLNHGQCAHSGVLKSGLCADGHVRHSLITMYSRCGELGCARRVFDEISEKD 191
Query: 171 LVVWNCLISCYCQNGLSDLSISLLPQIMQQGLYPGSISITTVLMAISSVAAL 16
LV WN +IS Y + G + ++ L ++ G P +++ ++L A + L
Sbjct: 192 LVSWNSMISGYSRMGYAGDAVGLFGEMRDAGFEPDEMTLVSILGACGDLGDL 243