BLASTX nr result
ID: Catharanthus23_contig00028176
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00028176
(254 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006848193.1| hypothetical protein AMTR_s00029p00239610 [A... 167 1e-39
prf||1908421A light-harvesting complex IIa protein 165 7e-39
ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein C... 164 1e-38
ref|XP_003562892.1| PREDICTED: chlorophyll a-b binding protein C... 162 3e-38
ref|XP_004958012.1| PREDICTED: chlorophyll a-b binding protein C... 161 9e-38
gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [V... 161 9e-38
gb|EXC23662.1| hypothetical protein L484_015572 [Morus notabilis] 160 1e-37
ref|XP_006657829.1| PREDICTED: chlorophyll a-b binding protein C... 160 1e-37
ref|XP_004506774.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll ... 160 1e-37
ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein C... 160 1e-37
ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group] g... 160 1e-37
ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein C... 160 1e-37
ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein C... 160 1e-37
ref|XP_002528105.1| chlorophyll A/B binding protein, putative [R... 160 1e-37
gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japo... 160 1e-37
ref|NP_195773.1| chlorophyll a-b binding protein CP29.1 [Arabido... 160 2e-37
ref|XP_006366348.1| PREDICTED: chlorophyll a-b binding protein C... 160 2e-37
ref|XP_006407730.1| hypothetical protein EUTSA_v10021263mg [Eutr... 160 2e-37
ref|XP_006398606.1| hypothetical protein EUTSA_v10014055mg [Eutr... 160 2e-37
ref|XP_006300034.1| hypothetical protein CARUB_v10016258mg [Caps... 160 2e-37
>ref|XP_006848193.1| hypothetical protein AMTR_s00029p00239610 [Amborella trichopoda]
gi|548851498|gb|ERN09774.1| hypothetical protein
AMTR_s00029p00239610 [Amborella trichopoda]
Length = 291
Score = 167 bits (424), Expect = 1e-39
Identities = 80/84 (95%), Positives = 83/84 (98%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY EVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELI+GSSYL
Sbjct: 122 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIEGSSYL 181
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
GLPLPFT+T+LIWIEVLVIGYIEF
Sbjct: 182 GLPLPFTMTTLIWIEVLVIGYIEF 205
>prf||1908421A light-harvesting complex IIa protein
Length = 286
Score = 165 bits (417), Expect = 7e-39
Identities = 79/84 (94%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPYAEVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 117 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYL 176
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPFTIT+LIWIEVLVIGYIEF
Sbjct: 177 GQPLPFTITTLIWIEVLVIGYIEF 200
>ref|XP_002279834.1| PREDICTED: chlorophyll a-b binding protein CP29.2, chloroplastic
[Vitis vinifera] gi|147784938|emb|CAN77492.1|
hypothetical protein VITISV_010727 [Vitis vinifera]
Length = 288
Score = 164 bits (414), Expect = 1e-38
Identities = 78/84 (92%), Positives = 82/84 (97%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY EVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELI+GSSYL
Sbjct: 119 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIEGSSYL 178
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF++T+LIWIEVLVIGYIEF
Sbjct: 179 GQPLPFSMTTLIWIEVLVIGYIEF 202
>ref|XP_003562892.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Brachypodium distachyon]
Length = 288
Score = 162 bits (411), Expect = 3e-38
Identities = 78/84 (92%), Positives = 80/84 (95%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STP QPYAEVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 120 STPLQPYAEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYL 179
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPFTIT+LIWIEVLVIGYIEF
Sbjct: 180 GQPLPFTITTLIWIEVLVIGYIEF 203
>ref|XP_004958012.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Setaria italica]
Length = 290
Score = 161 bits (407), Expect = 9e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 120 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 179
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 180 GQPLPFSISTLIWIEVLVIGYIEF 203
>gb|AAD27878.1|AF139466_1 chlorophyll a/b binding protein CP29 [Vigna radiata]
Length = 290
Score = 161 bits (407), Expect = 9e-38
Identities = 76/84 (90%), Positives = 82/84 (97%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL++GSSYL
Sbjct: 120 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 179
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 180 GQPLPFSITTLIWIEVLVIGYIEF 203
>gb|EXC23662.1| hypothetical protein L484_015572 [Morus notabilis]
Length = 287
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL++GSSYL
Sbjct: 118 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYL 177
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 178 GQPLPFSITTLIWIEVLVIGYIEF 201
>ref|XP_006657829.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Oryza brachyantha]
Length = 288
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 119 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYL 178
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 179 GQPLPFSISTLIWIEVLVIGYIEF 202
>ref|XP_004506774.1| PREDICTED: LOW QUALITY PROTEIN: chlorophyll a-b binding protein
CP29.1, chloroplastic-like [Cicer arietinum]
Length = 343
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL++GS+YL
Sbjct: 174 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSTYL 233
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+ITSLIWIEVLVIGYIEF
Sbjct: 234 GQPLPFSITSLIWIEVLVIGYIEF 257
>ref|XP_004147887.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Cucumis sativus]
gi|449516143|ref|XP_004165107.1| PREDICTED: chlorophyll
a-b binding protein CP29.2, chloroplastic-like [Cucumis
sativus]
Length = 284
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY EVFGLQRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL++GSSYL
Sbjct: 116 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVEGSSYL 175
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 176 GQPLPFSITTLIWIEVLVIGYIEF 199
>ref|NP_001059975.1| Os07g0558400 [Oryza sativa Japonica Group]
gi|3075488|gb|AAC14566.1| chlorophyll a/b-binding
protein [Oryza sativa Japonica Group]
gi|34394009|dbj|BAC84033.1| chlorophyll a/b-binding
protein [Oryza sativa Japonica Group]
gi|113611511|dbj|BAF21889.1| Os07g0558400 [Oryza sativa
Japonica Group] gi|125558786|gb|EAZ04322.1| hypothetical
protein OsI_26463 [Oryza sativa Indica Group]
gi|215704418|dbj|BAG93852.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737393|dbj|BAG96322.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215737709|dbj|BAG96839.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215764955|dbj|BAG86652.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215767447|dbj|BAG99675.1| unnamed protein product
[Oryza sativa Japonica Group]
Length = 290
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY EVFGLQRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 120 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 179
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 180 GQPLPFSISTLIWIEVLVIGYIEF 203
>ref|XP_003520609.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Glycine max]
Length = 290
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL++GSSYL
Sbjct: 120 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYL 179
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 180 GQPLPFSITTLIWIEVLVIGYIEF 203
>ref|XP_003516950.1| PREDICTED: chlorophyll a-b binding protein CP29.2,
chloroplastic-like [Glycine max]
Length = 290
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL++GSSYL
Sbjct: 120 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYL 179
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 180 GQPLPFSITTLIWIEVLVIGYIEF 203
>ref|XP_002528105.1| chlorophyll A/B binding protein, putative [Ricinus communis]
gi|223532494|gb|EEF34284.1| chlorophyll A/B binding
protein, putative [Ricinus communis]
Length = 285
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL++GSSYL
Sbjct: 117 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVEGSSYL 176
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 177 GQPLPFSITTLIWIEVLVIGYIEF 200
>gb|EAZ40279.1| hypothetical protein OsJ_24721 [Oryza sativa Japonica Group]
Length = 267
Score = 160 bits (406), Expect = 1e-37
Identities = 76/84 (90%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY EVFGLQRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 97 STPFQPYTEVFGLQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 156
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 157 GQPLPFSISTLIWIEVLVIGYIEF 180
>ref|NP_195773.1| chlorophyll a-b binding protein CP29.1 [Arabidopsis thaliana]
gi|38502901|sp|Q07473.1|CB4A_ARATH RecName:
Full=Chlorophyll a-b binding protein CP29.1,
chloroplastic; AltName: Full=LHCB4.1; AltName:
Full=LHCII protein 4.1; Flags: Precursor
gi|298036|emb|CAA50712.1| CP29 [Arabidopsis thaliana]
gi|7327812|emb|CAB82269.1| chlorophyll a/b-binding
protein CP29 [Arabidopsis thaliana]
gi|15081815|gb|AAK82562.1| AT5g01530/F7A7_50
[Arabidopsis thaliana] gi|16323075|gb|AAL15272.1|
AT5g01530/F7A7_50 [Arabidopsis thaliana]
gi|16648983|gb|AAL24343.1| chlorophyll a/b-binding
protein CP29 [Arabidopsis thaliana]
gi|20148703|gb|AAM10242.1| chlorophyll a/b-binding
protein CP29 [Arabidopsis thaliana]
gi|22137102|gb|AAM91396.1| At5g01530/F7A7_50
[Arabidopsis thaliana] gi|110741014|dbj|BAE98601.1|
Lhcb4- protein [Arabidopsis thaliana]
gi|332002974|gb|AED90357.1| chlorophyll a-b binding
protein CP29.1 [Arabidopsis thaliana]
Length = 290
Score = 160 bits (405), Expect = 2e-37
Identities = 75/84 (89%), Positives = 82/84 (97%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 121 STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 180
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 181 GQPLPFSISTLIWIEVLVIGYIEF 204
>ref|XP_006366348.1| PREDICTED: chlorophyll a-b binding protein CP29.1,
chloroplastic-like [Solanum tuberosum]
Length = 285
Score = 160 bits (405), Expect = 2e-37
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTG+TWQDAGKVEL++GSSYL
Sbjct: 115 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGITWQDAGKVELVEGSSYL 174
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+IT+LIWIEVLVIGYIEF
Sbjct: 175 GQPLPFSITTLIWIEVLVIGYIEF 198
>ref|XP_006407730.1| hypothetical protein EUTSA_v10021263mg [Eutrema salsugineum]
gi|557108876|gb|ESQ49183.1| hypothetical protein
EUTSA_v10021263mg [Eutrema salsugineum]
Length = 287
Score = 160 bits (405), Expect = 2e-37
Identities = 75/84 (89%), Positives = 82/84 (97%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 118 STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 177
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 178 GQPLPFSISTLIWIEVLVIGYIEF 201
>ref|XP_006398606.1| hypothetical protein EUTSA_v10014055mg [Eutrema salsugineum]
gi|557099696|gb|ESQ40059.1| hypothetical protein
EUTSA_v10014055mg [Eutrema salsugineum]
Length = 335
Score = 160 bits (405), Expect = 2e-37
Identities = 75/84 (89%), Positives = 82/84 (97%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFG+QRFRECELIHGRWAMLATLGAL+VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 165 STPFQPYSEVFGIQRFRECELIHGRWAMLATLGALSVEWLTGVTWQDAGKVELVDGSSYL 224
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLVIGYIEF
Sbjct: 225 GQPLPFSISTLIWIEVLVIGYIEF 248
>ref|XP_006300034.1| hypothetical protein CARUB_v10016258mg [Capsella rubella]
gi|482568743|gb|EOA32932.1| hypothetical protein
CARUB_v10016258mg [Capsella rubella]
Length = 287
Score = 160 bits (405), Expect = 2e-37
Identities = 75/84 (89%), Positives = 81/84 (96%)
Frame = -2
Query: 253 STPFQPYAEVFGLQRFRECELIHGRWAMLATLGALAVESLTGVTWQDAGKVELIDGSSYL 74
STPFQPY+EVFGLQRFRECELIHGRWAMLATLGAL VE LTGVTWQDAGKVEL+DGSSYL
Sbjct: 118 STPFQPYSEVFGLQRFRECELIHGRWAMLATLGALTVEWLTGVTWQDAGKVELVDGSSYL 177
Query: 73 GLPLPFTITSLIWIEVLVIGYIEF 2
G PLPF+I++LIWIEVLV+GYIEF
Sbjct: 178 GQPLPFSISTLIWIEVLVVGYIEF 201