BLASTX nr result

ID: Catharanthus23_contig00028074 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028074
         (648 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY20208.1| Pentatricopeptide repeat superfamily protein, put...    61   2e-07
gb|EOY20207.1| Pentatricopeptide repeat superfamily protein, put...    61   2e-07

>gb|EOY20208.1| Pentatricopeptide repeat superfamily protein, putative isoform 2
           [Theobroma cacao]
          Length = 657

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
 Frame = -1

Query: 648 VKMIKKILKEMSDSRVEMDSYTYELIKGFLYKSHNSSLVLNIFVELWDSGLLPEKMCSLL 469
           +KM+K++L+E+S++ VE+D  T   +   L++S+     LN F+E+W+SGL+P++     
Sbjct: 553 LKMVKQLLQEISEAEVELDHNTVNSVTKLLFRSYPYPSALNQFIEMWNSGLIPDEAMYAQ 612

Query: 468 VERGKDATVVV--AHRSKVVT-VQD---IGSSSSDECCGLAASVG 352
             +G    V V  AH S + T ++D   + SS SD+   +AASVG
Sbjct: 613 FSKGPAYGVNVGDAHHSFLKTYLRDKLLVDSSGSDDIPYVAASVG 657


>gb|EOY20207.1| Pentatricopeptide repeat superfamily protein, putative isoform 1
           [Theobroma cacao]
          Length = 695

 Score = 61.2 bits (147), Expect = 2e-07
 Identities = 38/105 (36%), Positives = 64/105 (60%), Gaps = 6/105 (5%)
 Frame = -1

Query: 648 VKMIKKILKEMSDSRVEMDSYTYELIKGFLYKSHNSSLVLNIFVELWDSGLLPEKMCSLL 469
           +KM+K++L+E+S++ VE+D  T   +   L++S+     LN F+E+W+SGL+P++     
Sbjct: 591 LKMVKQLLQEISEAEVELDHNTVNSVTKLLFRSYPYPSALNQFIEMWNSGLIPDEAMYAQ 650

Query: 468 VERGKDATVVV--AHRSKVVT-VQD---IGSSSSDECCGLAASVG 352
             +G    V V  AH S + T ++D   + SS SD+   +AASVG
Sbjct: 651 FSKGPAYGVNVGDAHHSFLKTYLRDKLLVDSSGSDDIPYVAASVG 695


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