BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028054
         (660 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containi...   144   2e-32
emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]   144   2e-32
gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]     139   1e-30
gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus pe...   138   1e-30
gb|EOX94157.1| Pentatricopeptide repeat-containing protein, puta...   133   5e-29
ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containi...   130   4e-28
ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containi...   125   1e-26
ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containi...   116   5e-24
ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis th...   115   2e-23
ref|XP_002330010.1| predicted protein [Populus trichocarpa]           115   2e-23
dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]           115   2e-23
ref|XP_006853394.1| hypothetical protein AMTR_s00032p00145640 [A...   114   2e-23
ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat...   114   3e-23
gb|ADE77588.1| unknown [Picea sitchensis]                             114   3e-23
emb|CBI34855.3| unnamed protein product [Vitis vinifera]              114   3e-23
ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp....   113   6e-23
ref|XP_006485864.1| PREDICTED: pentatricopeptide repeat-containi...   112   8e-23
ref|XP_006436291.1| hypothetical protein CICLE_v10033724mg, part...   112   8e-23
ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutr...   112   8e-23
gb|EOY04173.1| Mitochondrial editing factor 22 [Theobroma cacao]      112   1e-22

>ref|XP_002278166.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 662

 Score =  144 bits (363), Expect = 2e-32
 Identities = 66/95 (69%), Positives = 76/95 (80%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHD 478
           E  G R+  DFSLHDVDEEREC    HSELLA SFGLI T+ G TIRVTKN R+C +CHD
Sbjct: 568 EEEGTRLNLDFSLHDVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHD 627

Query: 477 SVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           S KAI ++V+REIII+DPS FHHF+DG CSCGD+W
Sbjct: 628 SAKAISKIVEREIIIKDPSCFHHFKDGFCSCGDFW 662


>emb|CAN82226.1| hypothetical protein VITISV_011875 [Vitis vinifera]
          Length = 734

 Score =  144 bits (363), Expect = 2e-32
 Identities = 66/95 (69%), Positives = 76/95 (80%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHD 478
           E  G R+  DFSLHDVDEEREC    HSELLA SFGLI T+ G TIRVTKN R+C +CHD
Sbjct: 640 EEEGTRLNLDFSLHDVDEERECVPIGHSELLATSFGLISTQAGATIRVTKNLRMCGNCHD 699

Query: 477 SVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           S KAI ++V+REIII+DPS FHHF+DG CSCGD+W
Sbjct: 700 SAKAISKIVEREIIIKDPSCFHHFKDGFCSCGDFW 734


>gb|EXB73287.1| hypothetical protein L484_009366 [Morus notabilis]
          Length = 676

 Score =  139 bits (349), Expect = 1e-30
 Identities = 60/95 (63%), Positives = 75/95 (78%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHD 478
           E  G +  +D+SLHDVDEER+C    HSE+LA SFGLI +K   T+RVTKNHR+CR CH+
Sbjct: 582 EEEGQKPNADYSLHDVDEERDCIGVGHSEMLAISFGLISSKGSATVRVTKNHRVCRFCHE 641

Query: 477 SVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           S KAI  +V REII++DP+ FHHFRDG+CSCGD+W
Sbjct: 642 SAKAISNIVGREIILKDPNRFHHFRDGLCSCGDFW 676


>gb|EMJ28376.1| hypothetical protein PRUPE_ppa020455mg [Prunus persica]
          Length = 654

 Score =  138 bits (348), Expect = 1e-30
 Identities = 63/95 (66%), Positives = 75/95 (78%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHD 478
           E  G R  SDFS HDVDEEREC    HSE+LA SFGLI T+ G+TIRVTKN R+CR+CHD
Sbjct: 560 EDEGHRRDSDFSFHDVDEERECIPIGHSEMLAISFGLISTQAGSTIRVTKNLRVCRNCHD 619

Query: 477 SVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           S K I ++V REII++DP+ FHHF+DG CSCGD+W
Sbjct: 620 SAKIISQMVGREIILKDPNCFHHFKDGYCSCGDFW 654


>gb|EOX94157.1| Pentatricopeptide repeat-containing protein, putative [Theobroma
           cacao]
          Length = 656

 Score =  133 bits (334), Expect = 5e-29
 Identities = 61/95 (64%), Positives = 74/95 (77%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHD 478
           E  G R +S FSLHDVDEEREC H  HSE+LA SFGLI T+   TIRVTKN R+CRSCHD
Sbjct: 562 EDEGRRPSSVFSLHDVDEERECIHIGHSEMLAISFGLISTQGRETIRVTKNLRVCRSCHD 621

Query: 477 SVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           + K I ++V+R+III+DP+ FHH +DG+C CGD W
Sbjct: 622 TAKVISKIVERKIIIKDPNCFHHIQDGVCLCGDLW 656


>ref|XP_004301045.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Fragaria vesca subsp. vesca]
          Length = 656

 Score =  130 bits (327), Expect = 4e-28
 Identities = 58/86 (67%), Positives = 70/86 (81%)
 Frame = -1

Query: 630 DFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVKAICRVV 451
           D+SLHDV EEREC    HSE+LA SFGLI ++ GTTIRVTKN R+CR+CH S KAI ++V
Sbjct: 571 DYSLHDVYEERECIQIGHSEMLAISFGLISSQTGTTIRVTKNLRVCRNCHASAKAISKMV 630

Query: 450 DREIIIRDPSDFHHFRDGICSCGDYW 373
            REII++DP  FHHF+DG CSCGD+W
Sbjct: 631 GREIILKDPKCFHHFKDGYCSCGDFW 656


>ref|XP_004137884.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 629

 Score =  125 bits (314), Expect = 1e-26
 Identities = 58/94 (61%), Positives = 70/94 (74%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHD 478
           E  G +   DFSLHDVDEEREC    HSELLA SFGLI T+ G TIR+TKN R+C SCH+
Sbjct: 535 EEDGSKPNPDFSLHDVDEERECVPIGHSELLAISFGLISTEAGRTIRITKNLRVCHSCHE 594

Query: 477 SVKAICRVVDREIIIRDPSDFHHFRDGICSCGDY 376
           S K I ++V REII++DP  FHHF+DG CSC ++
Sbjct: 595 SAKFISKMVGREIIVKDPYVFHHFKDGCCSCENF 628


>ref|XP_004136408.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 632

 Score =  116 bits (291), Expect = 5e-24
 Identities = 50/93 (53%), Positives = 70/93 (75%), Gaps = 1/93 (1%)
 Frame = -1

Query: 648 GFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSV 472
           G++  +D  +H++DEE +E   + HSE LA +FGLI T +GTTIR+ KN R+C  CHD++
Sbjct: 540 GYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLRVCNDCHDAI 599

Query: 471 KAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           K I ++V+REI++RD S FHHF+DG CSC DYW
Sbjct: 600 KIISKIVEREIVVRDRSRFHHFKDGKCSCNDYW 632


>ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
           gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g12770 gi|11994419|dbj|BAB02421.1| selenium-binding
           protein-like [Arabidopsis thaliana]
           gi|332641723|gb|AEE75244.1| mitochondrial editing factor
           22 [Arabidopsis thaliana]
          Length = 694

 Score =  115 bits (287), Expect = 2e-23
 Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDV-DEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
           + GGF    D SLHD+ DEE E     HSE +A ++GLI T +GT +R+TKN R C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCH 658

Query: 480 DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            + K I ++VDREI++RD + FHHF+DG+CSCGDYW
Sbjct: 659 AATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694


>ref|XP_002330010.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  115 bits (287), Expect = 2e-23
 Identities = 52/93 (55%), Positives = 67/93 (72%), Gaps = 1/93 (1%)
 Frame = -1

Query: 648 GFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSV 472
           G+   +D +LHDV+EE +EC    HSE LA  F ++ TK G+TIR+TKN R+C  CH + 
Sbjct: 585 GYMPETDSALHDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVAT 644

Query: 471 KAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           K I ++ +REIIIRD   FHHFRDG+CSCGDYW
Sbjct: 645 KLISKIAEREIIIRDTHRFHHFRDGVCSCGDYW 677


>dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  115 bits (287), Expect = 2e-23
 Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDV-DEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
           + GGF    D SLHD+ DEE E     HSE +A ++GLI T +GT +R+TKN R C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCH 658

Query: 480 DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            + K I ++VDREI++RD + FHHF+DG+CSCGDYW
Sbjct: 659 AATKLISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694


>ref|XP_006853394.1| hypothetical protein AMTR_s00032p00145640 [Amborella trichopoda]
           gi|548857047|gb|ERN14861.1| hypothetical protein
           AMTR_s00032p00145640 [Amborella trichopoda]
          Length = 323

 Score =  114 bits (286), Expect = 2e-23
 Identities = 50/92 (54%), Positives = 65/92 (70%)
 Frame = -1

Query: 648 GFRITSDFSLHDVDEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSVK 469
           G  + +DFS+HDVDEEREC  + HSE+LA  FGLI  +    IRV KN R+CR+CH   +
Sbjct: 232 GHVLENDFSMHDVDEERECIPSGHSEMLAIGFGLISIQSRVPIRVVKNLRVCRNCHSMAE 291

Query: 468 AICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            I + VDREI+++D   FHHF+DG CSCG+ W
Sbjct: 292 WISKFVDREIVLKDRDQFHHFKDGNCSCGELW 323


>ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  114 bits (285), Expect = 3e-23
 Identities = 51/96 (53%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657  EHGGFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
            +H G+   +DF LHD++EE +E   + HSE LA +FGLI T  GTT+R+TKN RIC  CH
Sbjct: 1196 KHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCH 1255

Query: 480  DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            +++K I ++V+R I++RD   FH F DG+CSCGDYW
Sbjct: 1256 NAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291


>gb|ADE77588.1| unknown [Picea sitchensis]
          Length = 312

 Score =  114 bits (285), Expect = 3e-23
 Identities = 53/93 (56%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = -1

Query: 648 GFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSV 472
           G+   +DF LHDV+EE +E     HSE LA +FGLI T+ GT+IR+TKN R+C  CH + 
Sbjct: 220 GYVPCTDFVLHDVEEEIKENMLFAHSEKLAIAFGLISTRSGTSIRITKNLRVCGDCHSAT 279

Query: 471 KAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           K I ++V REII+RD + FHHF+DG+CSCGDYW
Sbjct: 280 KFISKIVKREIIMRDLNRFHHFKDGLCSCGDYW 312


>emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  114 bits (285), Expect = 3e-23
 Identities = 51/96 (53%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657  EHGGFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
            +H G+   +DF LHD++EE +E   + HSE LA +FGLI T  GTT+R+TKN RIC  CH
Sbjct: 861  KHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCH 920

Query: 480  DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            +++K I ++V+R I++RD   FH F DG+CSCGDYW
Sbjct: 921  NAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956


>ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297330765|gb|EFH61184.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  113 bits (282), Expect = 6e-23
 Identities = 51/96 (53%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDV-DEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
           + GGF    D SLHD+ DEE E     HSE +  ++GLI T +GTT+R+TKN R C +CH
Sbjct: 599 KEGGFVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCH 658

Query: 480 DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            + K I ++V REI++RD + FHHF+DG+CSCGDYW
Sbjct: 659 AATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694


>ref|XP_006485864.1| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Citrus sinensis]
          Length = 583

 Score =  112 bits (281), Expect = 8e-23
 Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = -1

Query: 648 GFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSV 472
           G+   +DF LHD++EE +E   + HSE LA +FGLI T  GTTIR+TKN RIC  CH+++
Sbjct: 491 GYIPMTDFVLHDIEEEAKEEALSYHSERLAIAFGLIKTAPGTTIRITKNLRICGDCHNAI 550

Query: 471 KAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           K I ++ +R I++RD   FHHF+DG+CSCGDYW
Sbjct: 551 KLISKIENRLIVVRDMHRFHHFKDGVCSCGDYW 583


>ref|XP_006436291.1| hypothetical protein CICLE_v10033724mg, partial [Citrus clementina]
           gi|557538487|gb|ESR49531.1| hypothetical protein
           CICLE_v10033724mg, partial [Citrus clementina]
          Length = 580

 Score =  112 bits (281), Expect = 8e-23
 Identities = 51/93 (54%), Positives = 69/93 (74%), Gaps = 1/93 (1%)
 Frame = -1

Query: 648 GFRITSDFSLHDVDEE-RECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCHDSV 472
           G+   +DF LHD++EE +E   + HSE LA +FGLI T  GTTIR+TKN RIC  CH+++
Sbjct: 488 GYIPMTDFVLHDIEEEAKEEALSYHSERLAIAFGLIKTAPGTTIRITKNLRICGDCHNAI 547

Query: 471 KAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
           K I ++ +R I++RD   FHHF+DG+CSCGDYW
Sbjct: 548 KLISKIENRLIVVRDMHRFHHFKDGVCSCGDYW 580


>ref|XP_006407296.1| hypothetical protein EUTSA_v10020185mg [Eutrema salsugineum]
           gi|557108442|gb|ESQ48749.1| hypothetical protein
           EUTSA_v10020185mg [Eutrema salsugineum]
          Length = 694

 Score =  112 bits (281), Expect = 8e-23
 Identities = 52/96 (54%), Positives = 68/96 (70%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDV-DEERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
           + GGF    D SLHD+ DEE E     HSE +A ++GLI T  GTT+R+TKN R C +CH
Sbjct: 599 KEGGFVAYKDASLHDLNDEEAEETLCSHSERIAIAYGLISTLPGTTLRITKNLRACVNCH 658

Query: 480 DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            + K I ++V REI++RD + FHHF+DG+CSCGDYW
Sbjct: 659 AATKLISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694


>gb|EOY04173.1| Mitochondrial editing factor 22 [Theobroma cacao]
          Length = 735

 Score =  112 bits (280), Expect = 1e-22
 Identities = 52/96 (54%), Positives = 69/96 (71%), Gaps = 1/96 (1%)
 Frame = -1

Query: 657 EHGGFRITSDFSLHDVD-EERECPHTRHSELLAASFGLIYTKKGTTIRVTKNHRICRSCH 481
           +  GF   +D SLHD++ EE E     HSE LA +FGLI T  GTT+R+TKN R C +CH
Sbjct: 640 KQAGFIPHTDSSLHDLNYEEMEETLCNHSERLAIAFGLISTAPGTTLRITKNLRACINCH 699

Query: 480 DSVKAICRVVDREIIIRDPSDFHHFRDGICSCGDYW 373
            + K I ++V+REI++RD + FHHF+DG+CSCGDYW
Sbjct: 700 SATKLISKLVNREIVVRDANRFHHFKDGVCSCGDYW 735