BLASTX nr result

ID: Catharanthus23_contig00028016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00028016
         (237 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006350556.1| PREDICTED: GDSL esterase/lipase At4g10955-li...    59   1e-09
ref|XP_004235107.1| PREDICTED: GDSL esterase/lipase At4g10955-li...    60   3e-09
ref|XP_002303655.2| lipase class 3 family protein [Populus trich...    52   6e-06

>ref|XP_006350556.1| PREDICTED: GDSL esterase/lipase At4g10955-like [Solanum tuberosum]
          Length = 356

 Score = 58.5 bits (140), Expect(2) = 1e-09
 Identities = 27/43 (62%), Positives = 32/43 (74%)
 Frame = -2

Query: 236 VVKHDRQQNCQGCTNALAPPWWEFFKFQLVHVLEDPDDLSIFG 108
           +++ DRQQN QG  NALAPPWWEFF F L+ VL D +D S FG
Sbjct: 40  ILERDRQQNRQGF-NALAPPWWEFFHFHLIQVLVDNEDQSYFG 81



 Score = 29.6 bits (65), Expect(2) = 1e-09
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 7/39 (17%)
 Frame = -3

Query: 103 VYESQIPYLNYLNYTSHQNH-------PSRYVISFRGIV 8
           +YE + P  N+ N +   NH       P +YVI+FRG +
Sbjct: 83  IYEYKFPNSNFHNKSMDDNHNQNQNQNPPKYVIAFRGTI 121


>ref|XP_004235107.1| PREDICTED: GDSL esterase/lipase At4g10955-like [Solanum
           lycopersicum]
          Length = 354

 Score = 60.5 bits (145), Expect(2) = 3e-09
 Identities = 28/43 (65%), Positives = 33/43 (76%)
 Frame = -2

Query: 236 VVKHDRQQNCQGCTNALAPPWWEFFKFQLVHVLEDPDDLSIFG 108
           +++ DRQQN QG  NALAPPWWEFF FQL+ VL D +D S FG
Sbjct: 40  ILERDRQQNRQGF-NALAPPWWEFFHFQLIQVLVDNEDQSYFG 81



 Score = 26.2 bits (56), Expect(2) = 3e-09
 Identities = 12/37 (32%), Positives = 21/37 (56%), Gaps = 5/37 (13%)
 Frame = -3

Query: 103 VYESQIPYLNYLNYTSHQ-----NHPSRYVISFRGIV 8
           +YE + P  ++ N T +       +P +YVI+FRG +
Sbjct: 83  IYEYKFPNSHFHNKTKNDIQNQNQNPPKYVIAFRGTI 119


>ref|XP_002303655.2| lipase class 3 family protein [Populus trichocarpa]
           gi|550343136|gb|EEE78634.2| lipase class 3 family
           protein [Populus trichocarpa]
          Length = 343

 Score = 52.4 bits (124), Expect(2) = 6e-06
 Identities = 25/43 (58%), Positives = 30/43 (69%)
 Frame = -2

Query: 236 VVKHDRQQNCQGCTNALAPPWWEFFKFQLVHVLEDPDDLSIFG 108
           +++ DRQ   QG + ALAPPWWEFF FQL+  L D  D SIFG
Sbjct: 40  ILERDRQVKRQG-SQALAPPWWEFFHFQLIRQLVDDVDSSIFG 81



 Score = 23.1 bits (48), Expect(2) = 6e-06
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = -3

Query: 103 VYESQIPYLNYLNYTSHQNHPSRYVISFRGIV 8
           +YE + P  +Y N         RYVI+FRG +
Sbjct: 83  IYEFKPPESHYHNSVDES---PRYVIAFRGTI 111


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