BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00027898
         (217 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vi...    67   2e-09
emb|CBI37850.3| unnamed protein product [Vitis vinifera]               67   2e-09
ref|XP_002516388.1| splicing factor, putative [Ricinus communis]...    62   1e-07
ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Popu...    57   3e-06
ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Popu...    56   4e-06
gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus pe...    55   1e-05

>ref|XP_002279887.2| PREDICTED: RNA-binding protein rsd1-like [Vitis vinifera]
          Length = 609

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -2

Query: 198 MGVAGSVGAAPAISPPFVPIGQIPIPVPAGFPTSTFSIPDA-LPLSYTIGNPSECLLLKN 22
           +  A  +GAAP +SP   P+ Q P+P  AG P +   +P   +P   TIG PSECL+LKN
Sbjct: 462 LSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKN 521

Query: 21  MFDPKLE 1
           MFDPKLE
Sbjct: 522 MFDPKLE 528


>emb|CBI37850.3| unnamed protein product [Vitis vinifera]
          Length = 427

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 34/67 (50%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -2

Query: 198 MGVAGSVGAAPAISPPFVPIGQIPIPVPAGFPTSTFSIPDA-LPLSYTIGNPSECLLLKN 22
           +  A  +GAAP +SP   P+ Q P+P  AG P +   +P   +P   TIG PSECL+LKN
Sbjct: 280 LSTAPILGAAPVVSPLVAPLVQAPVPGLAGLPGAGLQVPAVTVPSIDTIGVPSECLMLKN 339

Query: 21  MFDPKLE 1
           MFDPKLE
Sbjct: 340 MFDPKLE 346


>ref|XP_002516388.1| splicing factor, putative [Ricinus communis]
           gi|223544486|gb|EEF46005.1| splicing factor, putative
           [Ricinus communis]
          Length = 609

 Score = 61.6 bits (148), Expect = 1e-07
 Identities = 34/71 (47%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
 Frame = -2

Query: 207 SDGMGV--AGSVGAAPAISPPFVPIGQIPIPVPAGFPTSTFSIPDALPLSYTIGNPSECL 34
           S G+ V  A  +GAAP I P   P+     P   G P ++  +P A+P   TIG PSECL
Sbjct: 458 STGLAVPTAPILGAAPVIPPIVAPLISGSAPAFPGLPGASVQLPGAIPSVDTIGVPSECL 517

Query: 33  LLKNMFDPKLE 1
           LLKNMFDP +E
Sbjct: 518 LLKNMFDPSIE 528


>ref|XP_002306193.2| hypothetical protein POPTR_0004s18320g [Populus trichocarpa]
           gi|550341316|gb|EEE86704.2| hypothetical protein
           POPTR_0004s18320g [Populus trichocarpa]
          Length = 609

 Score = 57.0 bits (136), Expect = 3e-06
 Identities = 28/61 (45%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
 Frame = -2

Query: 180 VGAAPAISPPFVPIGQIPIPVPAGFPTSTFSIP-DALPLSYTIGNPSECLLLKNMFDPKL 4
           +GA P +SP   P+    +P   G P     +P  A+P   TIG PS+CL LKNMFDPK 
Sbjct: 468 LGATPVVSPAVAPLLSGSVPAIPGLPVPGLQLPATAIPTMDTIGVPSDCLFLKNMFDPKT 527

Query: 3   E 1
           E
Sbjct: 528 E 528


>ref|XP_002312948.2| hypothetical protein POPTR_0009s13940g [Populus trichocarpa]
           gi|550331684|gb|EEE86903.2| hypothetical protein
           POPTR_0009s13940g [Populus trichocarpa]
          Length = 599

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 28/61 (45%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = -2

Query: 180 VGAAPAISPPFVPIGQIPIPVPAGFPTSTFSIP-DALPLSYTIGNPSECLLLKNMFDPKL 4
           +GAAPA+SP   P+    +    G P +   +P   +P   TIG PS+C+LLKNMFDPK 
Sbjct: 458 LGAAPAVSPAIAPLLSGSVLAIPGLPVAGLQLPATTIPTVETIGVPSDCILLKNMFDPKK 517

Query: 3   E 1
           E
Sbjct: 518 E 518


>gb|EMJ02383.1| hypothetical protein PRUPE_ppa003064mg [Prunus persica]
          Length = 607

 Score = 55.1 bits (131), Expect = 1e-05
 Identities = 33/61 (54%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
 Frame = -2

Query: 180 VGAAPAISPPFVPIGQIPIPVPAGFPTSTFSIPDA-LPLSYTIGNPSECLLLKNMFDPKL 4
           +GAAP +SP   PI    +P  AG       IP A LP   TIG PSECLLLKNMFDP +
Sbjct: 468 LGAAPVVSPLVPPI--TAVPGIAGLGVGGLQIPTAILPSIDTIGVPSECLLLKNMFDPAV 525

Query: 3   E 1
           E
Sbjct: 526 E 526