BLASTX nr result
ID: Catharanthus23_contig00027515
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00027515
(304 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 73 1e-11
emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera] 72 2e-11
gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 proteas... 73 3e-11
gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsi... 71 1e-10
emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 71 2e-10
emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|72697... 70 4e-10
gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. ... 69 6e-10
emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera] 68 8e-10
gb|AAC35532.1| contains similarity to proteases [Arabidopsis tha... 68 1e-09
emb|CAB40035.1| retrotransposon like protein [Arabidopsis thalia... 68 1e-09
emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana] 67 2e-09
ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488... 67 2e-09
emb|CBI36090.3| unnamed protein product [Vitis vinifera] 66 5e-09
emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera] 66 5e-09
gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsi... 65 7e-09
gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana] 65 7e-09
emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera] 65 1e-08
gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Ar... 64 2e-08
emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera] 64 3e-08
emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera] 64 3e-08
>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
Length = 1239
Score = 72.8 bits (177), Expect(2) = 1e-11
Identities = 34/86 (39%), Positives = 47/86 (54%)
Frame = -2
Query: 258 STLRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSP 79
S + L K +++ + SLC+ CQLAK LP + IHC+LWGPSP
Sbjct: 440 SVISFLNKKGHLSLTSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSP 499
Query: 78 VLSLGKIFYYACFVDDFSRYTWIIPL 1
+ S YY F+DD+SR+TW+ PL
Sbjct: 500 IKSNSGFLYYVIFIDDYSRFTWLYPL 525
Score = 21.9 bits (45), Expect(2) = 1e-11
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 293 DLWHQQLGLLKCPLFGCYNKR 231
DLWH +LG + + NK+
Sbjct: 428 DLWHARLGHVNYSVISFLNKK 448
>emb|CAN69607.1| hypothetical protein VITISV_009561 [Vitis vinifera]
Length = 1207
Score = 72.4 bits (176), Expect(2) = 2e-11
Identities = 33/86 (38%), Positives = 46/86 (53%)
Frame = -2
Query: 258 STLRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSP 79
S + L K +++ + SLC+ CQ AK LP + IHC+LWGPSP
Sbjct: 402 SVISFLNKKXQLSLTSLLPSPSLCSTCQFAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSP 461
Query: 78 VLSLGKIFYYACFVDDFSRYTWIIPL 1
+ S YY F+DD+SR+TW+ PL
Sbjct: 462 IKSNSSFLYYVIFIDDYSRFTWLYPL 487
Score = 21.9 bits (45), Expect(2) = 2e-11
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -3
Query: 293 DLWHQQLGLLKCPLFGCYNKR 231
DLWH +LG + + NK+
Sbjct: 390 DLWHARLGHVNYSVISFLNKK 410
>gb|AAD21687.1| Strong similarity to gi|3600044 T12H20.12 protease homolog from
Arabidopsis thaliana BAC gb|AF080119 and is a member of
the reverse transcriptase family PF|00078 [Arabidopsis
thaliana]
Length = 1415
Score = 73.2 bits (178), Expect = 3e-11
Identities = 37/84 (44%), Positives = 49/84 (58%)
Frame = -2
Query: 252 LRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVL 73
L+ LQ I + S +T +C CQ+ K S LP ++IHC+LWGPSPV+
Sbjct: 468 LQHLQNSKAIQINKS-RTSPVCEPCQMGKSSRLPFLISDSRVLHPLDRIHCDLWGPSPVV 526
Query: 72 SLGKIFYYACFVDDFSRYTWIIPL 1
S + YYA FVDD+SRY+W PL
Sbjct: 527 SNQGLKYYAIFVDDYSRYSWFYPL 550
>gb|AAC67200.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1402
Score = 71.2 bits (173), Expect = 1e-10
Identities = 32/70 (45%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Frame = -2
Query: 207 NKT-QSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDD 31
NKT +SLC CQL K + LP ++HC+LWGPSP+ S+ YYA F+D
Sbjct: 491 NKTSKSLCEACQLGKSTRLPFVSSSFTSNRPLERVHCDLWGPSPITSVQGFRYYAVFIDH 550
Query: 30 FSRYTWIIPL 1
+SR++WI PL
Sbjct: 551 YSRFSWIYPL 560
>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
Length = 1501
Score = 70.9 bits (172), Expect = 2e-10
Identities = 31/65 (47%), Positives = 39/65 (60%)
Frame = -2
Query: 195 SLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDDFSRYT 16
SLC+ CQLAK LP + IHC+LWGPSP+ S YY F+DD+SR+T
Sbjct: 439 SLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLWGPSPIKSNSGFLYYVIFIDDYSRFT 498
Query: 15 WIIPL 1
W+ PL
Sbjct: 499 WLYPL 503
>emb|CAB43904.1| putative protein [Arabidopsis thaliana] gi|7269745|emb|CAB81478.1|
putative protein [Arabidopsis thaliana]
Length = 1415
Score = 69.7 bits (169), Expect = 4e-10
Identities = 29/74 (39%), Positives = 43/74 (58%)
Frame = -2
Query: 222 AVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYAC 43
A+ S + SLC+ CQ+ K+ LP ++HC+LWGP+PV+S YY
Sbjct: 447 AIVISKTSHSLCDACQMGKICKLPFASSDFVSSRLLERVHCDLWGPAPVVSSQGFRYYVI 506
Query: 42 FVDDFSRYTWIIPL 1
F+D++SR+TW PL
Sbjct: 507 FIDNYSRFTWFYPL 520
>gb|ACP30598.1| disease resistance protein [Brassica rapa subsp. pekinensis]
Length = 2301
Score = 68.9 bits (167), Expect = 6e-10
Identities = 28/70 (40%), Positives = 44/70 (62%)
Frame = -2
Query: 210 SNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDD 31
+ +++SLC CQ+AK S LP +IHC++WGPSPV+S+ + YY +D+
Sbjct: 489 NKRSKSLCVSCQMAKSSRLPFSASQFVATRPLERIHCDVWGPSPVVSVQEFKYYVVLIDN 548
Query: 30 FSRYTWIIPL 1
+SRY W+ P+
Sbjct: 549 YSRYCWMYPM 558
>emb|CAN79884.1| hypothetical protein VITISV_002539 [Vitis vinifera]
Length = 1453
Score = 67.8 bits (164), Expect(2) = 8e-10
Identities = 34/86 (39%), Positives = 45/86 (52%)
Frame = -2
Query: 258 STLRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSP 79
S L LL K + + T SLC+ CQLAK LP +HC++WG +P
Sbjct: 422 SILSLLNKKGQLFLTSLLPTPSLCSTCQLAKSHRLPFSSNTTRSNVVLGLVHCDIWGLAP 481
Query: 78 VLSLGKIFYYACFVDDFSRYTWIIPL 1
V S YY F+DD+SR+TW+ PL
Sbjct: 482 VKSNLGFNYYVLFIDDYSRFTWLYPL 507
Score = 20.8 bits (42), Expect(2) = 8e-10
Identities = 7/21 (33%), Positives = 12/21 (57%)
Frame = -3
Query: 293 DLWHQQLGLLKCPLFGCYNKR 231
+LWH +LG + + NK+
Sbjct: 410 ELWHARLGHVNHSILSLLNKK 430
>gb|AAC35532.1| contains similarity to proteases [Arabidopsis thaliana]
Length = 1392
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -2
Query: 207 NKTQS-LCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDD 31
NKT S +C CQ+ K+ LP +IHC+LWGP+PV S YY F+D+
Sbjct: 485 NKTSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDN 544
Query: 30 FSRYTWIIPL 1
+SR+TW PL
Sbjct: 545 YSRFTWFYPL 554
>emb|CAB40035.1| retrotransposon like protein [Arabidopsis thaliana]
gi|7267767|emb|CAB81170.1| retrotransposon like protein
[Arabidopsis thaliana]
Length = 1515
Score = 67.8 bits (164), Expect = 1e-09
Identities = 30/70 (42%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Frame = -2
Query: 207 NKTQS-LCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDD 31
NKT S +C CQ+ K+ LP +IHC+LWGP+PV S YY F+D+
Sbjct: 482 NKTSSNMCEACQMGKVCRLPFVASEFVSSRPLERIHCDLWGPAPVTSAQGFQYYVIFIDN 541
Query: 30 FSRYTWIIPL 1
+SR+TW PL
Sbjct: 542 YSRFTWFYPL 551
>emb|CAC37623.1| copia-like polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 67.4 bits (163), Expect = 2e-09
Identities = 29/69 (42%), Positives = 41/69 (59%)
Frame = -2
Query: 207 NKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDDF 28
++T +C CQ+ K + L +++HC+LWGPSPV+S YYA FVDDF
Sbjct: 484 SRTSPVCEPCQMGKSTRLQFFSSDFRALKPLDRVHCDLWGPSPVVSNQGFKYYAVFVDDF 543
Query: 27 SRYTWIIPL 1
SR++W PL
Sbjct: 544 SRFSWFFPL 552
>ref|XP_004513130.1| PREDICTED: uncharacterized protein LOC101488260 [Cicer arietinum]
Length = 752
Score = 67.0 bits (162), Expect = 2e-09
Identities = 31/70 (44%), Positives = 38/70 (54%)
Frame = -2
Query: 210 SNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDD 31
SN LC CQ KL +LP + IH +WGP+P+LS YY F+DD
Sbjct: 446 SNDHFLLCEACQFGKLHLLPFTSSYSHAKEPLDLIHSGVWGPAPILSPSNFKYYVHFIDD 505
Query: 30 FSRYTWIIPL 1
FSR+TWI PL
Sbjct: 506 FSRFTWIFPL 515
>emb|CBI36090.3| unnamed protein product [Vitis vinifera]
Length = 1273
Score = 65.9 bits (159), Expect = 5e-09
Identities = 32/84 (38%), Positives = 45/84 (53%)
Frame = -2
Query: 252 LRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVL 73
+ L K +++ + SLC+ CQLAK LP + IHC+L GPSP+
Sbjct: 1018 ISFLHKKGHLSLMSLLPSPSLCSTCQLAKNHRLPYSRNEHRSSHVLDLIHCDLPGPSPIK 1077
Query: 72 SLGKIFYYACFVDDFSRYTWIIPL 1
S YY F+DD+SR+TW+ PL
Sbjct: 1078 SNSGFLYYVIFIDDYSRFTWLYPL 1101
>emb|CAN75041.1| hypothetical protein VITISV_027174 [Vitis vinifera]
Length = 1381
Score = 65.9 bits (159), Expect = 5e-09
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Frame = -2
Query: 300 HCRLV-ASTTRTSQVSTLRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXX 124
H RL A ++R Q+ + LL S + +K C CQL K LP
Sbjct: 476 HSRLGHAPSSRVQQLVSRGLLGSVSRGLLGSVSKDNFDCTSCQLGKQPALPFNNSDSISK 535
Query: 123 XXXNKIHCELWGPSPVLSLGKIFYYACFVDDFSRYTWIIPL 1
IH ++WGPSPV S+G Y+ F+DD+SRY+WI P+
Sbjct: 536 SIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWIFPM 576
>gb|AAC61290.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1149
Score = 65.5 bits (158), Expect = 7e-09
Identities = 28/74 (37%), Positives = 40/74 (54%)
Frame = -2
Query: 222 AVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYAC 43
A+Q + T +C C+L K S LP ++HC+LWGP+PV S+ YY
Sbjct: 469 AIQINKSTSKMCESCRLGKSSRLPFIASDFIASRPLERVHCDLWGPAPVSSIQGFQYYVI 528
Query: 42 FVDDFSRYTWIIPL 1
F+D+ SR+ W PL
Sbjct: 529 FIDNRSRFCWFYPL 542
>gb|AAK51235.1|AF287471_1 polyprotein [Arabidopsis thaliana]
Length = 1453
Score = 65.5 bits (158), Expect = 7e-09
Identities = 29/69 (42%), Positives = 38/69 (55%)
Frame = -2
Query: 207 NKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDDF 28
++ +C CQ+ K S L +IHC+LWGPSPV+S YY FVDD+
Sbjct: 485 SRMSPVCEPCQMGKSSKLQFFSSNSRELDLLGRIHCDLWGPSPVVSKQGFKYYVVFVDDY 544
Query: 27 SRYTWIIPL 1
SRY+W PL
Sbjct: 545 SRYSWFYPL 553
>emb|CAN62394.1| hypothetical protein VITISV_021305 [Vitis vinifera]
Length = 1287
Score = 64.7 bits (156), Expect = 1e-08
Identities = 32/92 (34%), Positives = 46/92 (50%)
Frame = -2
Query: 276 TRTSQVSTLRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCE 97
+R S+ R+ Q S + +K C CQ+ K LP IH +
Sbjct: 452 SRLGHASSSRVQQLVSRGLLGSVSKDIFYCTSCQIGKQPALPFNNSESISHSIFELIHSD 511
Query: 96 LWGPSPVLSLGKIFYYACFVDDFSRYTWIIPL 1
+WGPSPV S+G Y+ F+DD+SRY+WI P+
Sbjct: 512 VWGPSPVASIGGSRYFVVFIDDYSRYSWIFPM 543
>gb|AAF02855.1|AC009324_4 Similar to retrotransposon proteins [Arabidopsis thaliana]
Length = 1522
Score = 64.3 bits (155), Expect = 2e-08
Identities = 31/78 (39%), Positives = 41/78 (52%)
Frame = -2
Query: 234 KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIF 55
KS+I + KT +C C L K + LP +IHC+LWGPSP S+
Sbjct: 479 KSIIIINKVVKT--VCEACHLGKSTRLPFMLSTFNASRPLERIHCDLWGPSPTSSVQGFR 536
Query: 54 YYACFVDDFSRYTWIIPL 1
YY F+D +SR+TW PL
Sbjct: 537 YYVVFIDHYSRFTWFYPL 554
>emb|CAN61929.1| hypothetical protein VITISV_014855 [Vitis vinifera]
Length = 1271
Score = 63.5 bits (153), Expect = 3e-08
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = -2
Query: 189 CNICQLAKLSILPXXXXXXXXXXXXNKIHCELWGPSPVLSLGKIFYYACFVDDFSRYTWI 10
C CQL K LP IH ++WGPSPV S+G Y+ F+DD+SRY+WI
Sbjct: 506 CTSCQLGKQPALPFNNSDSISKSIFELIHSDVWGPSPVASIGGSRYFVVFIDDYSRYSWI 565
Query: 9 IPL 1
P+
Sbjct: 566 FPM 568
>emb|CAN70361.1| hypothetical protein VITISV_033646 [Vitis vinifera]
Length = 1013
Score = 63.5 bits (153), Expect = 3e-08
Identities = 33/92 (35%), Positives = 45/92 (48%)
Frame = -2
Query: 276 TRTSQVSTLRLLQ*KSMIAVQGSNKTQSLCNICQLAKLSILPXXXXXXXXXXXXNKIHCE 97
+R S+ R+ Q S + +K C CQL K LP IH +
Sbjct: 176 SRLGHASSSRVQQLVSRGLLGFVSKDIFYCTSCQLGKQPTLPFNNSESISNSIFELIHSD 235
Query: 96 LWGPSPVLSLGKIFYYACFVDDFSRYTWIIPL 1
+WGPSPV S+G Y+ F+DD+SRY WI P+
Sbjct: 236 VWGPSPVASIGGSRYFVVFIDDYSRYIWIFPM 267