BLASTX nr result

ID: Catharanthus23_contig00027464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00027464
         (355 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006345691.1| PREDICTED: pentatricopeptide repeat-containi...    58   2e-06

>ref|XP_006345691.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g37320-like [Solanum tuberosum]
          Length = 483

 Score = 57.8 bits (138), Expect = 2e-06
 Identities = 31/97 (31%), Positives = 57/97 (58%), Gaps = 1/97 (1%)
 Frame = +3

Query: 63  NSLPFNSAVQSSKPFSALQELGQSAKTIQFKGKRVLDIVASKPNVANNCQSHLRLVQDFL 242
           N+L F   ++ + P + ++           KG+R LDI+A K NV  N Q+ ++L++DFL
Sbjct: 2   NNLLFRYGMRKNLPLTKIKR--------PLKGQRFLDILAPKQNVIKNHQNCVKLIEDFL 53

Query: 243 RTNPIQLKETQIDNE-TFHPDQNENSISILYKLHKRG 350
           +T  +Q  +  +D + +F   + E+S+S+L++ HK G
Sbjct: 54  QTGSVQNCKHPLDKDNSFSYSKEEDSVSLLFRFHKEG 90


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