BLASTX nr result

ID: Catharanthus23_contig00027244 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00027244
         (279 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002303119.1| hypothetical protein POPTR_0002s26020g [Popu...    58   1e-06
ref|XP_006386917.1| hypothetical protein POPTR_0002s26020g [Popu...    56   4e-06

>ref|XP_002303119.1| hypothetical protein POPTR_0002s26020g [Populus trichocarpa]
           gi|222844845|gb|EEE82392.1| hypothetical protein
           POPTR_0002s26020g [Populus trichocarpa]
          Length = 983

 Score = 57.8 bits (138), Expect = 1e-06
 Identities = 32/65 (49%), Positives = 39/65 (60%)
 Frame = +3

Query: 6   SPDEKPIIGTVGSYWRHTGQAVDEFSGSSYGQISNEPMSGQCRNGRMKSPSTTVQTRLEK 185
           SPDE PIIGTVG+YW H G   D  S SSY  I N   S    + R+   ST  +TRLE+
Sbjct: 366 SPDEMPIIGTVGTYWNHGGSGKDSGSASSYKGIPN-TTSKYREDKRVNWHSTPFETRLER 424

Query: 186 AMDSV 200
           A++ V
Sbjct: 425 ALNGV 429


>ref|XP_006386917.1| hypothetical protein POPTR_0002s26020g [Populus trichocarpa]
           gi|550345841|gb|ERP64714.1| hypothetical protein
           POPTR_0002s26020g [Populus trichocarpa]
          Length = 442

 Score = 56.2 bits (134), Expect = 4e-06
 Identities = 31/63 (49%), Positives = 38/63 (60%)
 Frame = +3

Query: 6   SPDEKPIIGTVGSYWRHTGQAVDEFSGSSYGQISNEPMSGQCRNGRMKSPSTTVQTRLEK 185
           SPDE PIIGTVG+YW H G   D  S SSY  I N   S    + R+   ST  +TRLE+
Sbjct: 366 SPDEMPIIGTVGTYWNHGGSGKDSGSASSYKGIPN-TTSKYREDKRVNWHSTPFETRLER 424

Query: 186 AMD 194
           A++
Sbjct: 425 ALN 427


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