BLASTX nr result

ID: Catharanthus23_contig00025466 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025466
         (899 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protei...    42   6e-07
gb|EOY31426.1| Uncharacterized protein TCM_038365 [Theobroma cacao]    59   2e-06
emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|73210...    35   7e-06
ref|XP_006305928.1| hypothetical protein CARUB_v10011149mg [Caps...    40   7e-06

>gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protein [Theobroma
           cacao]
          Length = 370

 Score = 41.6 bits (96), Expect(2) = 6e-07
 Identities = 17/30 (56%), Positives = 24/30 (80%)
 Frame = +3

Query: 645 VDETTLLASRGRYAQVCIEIDLQKPLISMV 734
           VD TT  ASRG++A++C+E+ L KPL+S V
Sbjct: 201 VDRTTAYASRGKFAKMCVELHLNKPLVSKV 230



 Score = 39.3 bits (90), Expect(2) = 6e-07
 Identities = 15/36 (41%), Positives = 26/36 (72%)
 Frame = +1

Query: 550 ISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGKWMRL 657
           + S   WIRL  +P+E+++  +L RIGN+LGK +++
Sbjct: 166 VDSIAAWIRLPGMPLEYYDSGILSRIGNELGKTLKV 201


>gb|EOY31426.1| Uncharacterized protein TCM_038365 [Theobroma cacao]
          Length = 534

 Score = 58.9 bits (141), Expect = 2e-06
 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
 Frame = +1

Query: 526 TLGLPSKE--ISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGKWMRL---PCWPPEGGMHR 690
           TLG  S++  I S   WI L  +P+E+++ D++ RIGN+LG+ +++         G   R
Sbjct: 46  TLGFRSEDASIDSVAAWIPLPGMPLEYYDYDVIARIGNELGRTLKIDQTTYQATRGKFAR 105

Query: 691 CALKLICRNH*SPW*EVWAE-KSVEYEGLC*VCFDCGQYDNRMDFCPKR 834
             +++  +N   P   +    + VEYEGL  +CF CG++ + +D C +R
Sbjct: 106 MCVEIDLKNPFVPKIFIGGRWQKVEYEGLRILCFHCGKFGHNIDCCEQR 154


>emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|7321071|emb|CAB82118.1|
           putative protein [Arabidopsis thaliana]
          Length = 404

 Score = 35.4 bits (80), Expect(3) = 7e-06
 Identities = 15/26 (57%), Positives = 20/26 (76%)
 Frame = +3

Query: 645 VDETTLLASRGRYAQVCIEIDLQKPL 722
           VD  T+   RGR+A+VCIE++L KPL
Sbjct: 143 VDLNTITFGRGRFARVCIEVNLAKPL 168



 Score = 34.3 bits (77), Expect(3) = 7e-06
 Identities = 14/37 (37%), Positives = 24/37 (64%)
 Frame = +1

Query: 547 EISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGKWMRL 657
           +I +T VW+RL  +PV +++  LL  I   LGK +++
Sbjct: 107 DIVTTPVWVRLTNIPVNYYHRCLLEEIARGLGKLLKV 143



 Score = 26.6 bits (57), Expect(3) = 7e-06
 Identities = 11/24 (45%), Positives = 16/24 (66%)
 Frame = +2

Query: 443 CLIWKGFVVRFFSKEDYSRTLIGG 514
           C+I K F++RF  +E+Y   L GG
Sbjct: 60  CMIVKFFMIRFELEEEYLAALTGG 83


>ref|XP_006305928.1| hypothetical protein CARUB_v10011149mg [Capsella rubella]
           gi|482574639|gb|EOA38826.1| hypothetical protein
           CARUB_v10011149mg [Capsella rubella]
          Length = 245

 Score = 40.0 bits (92), Expect(3) = 7e-06
 Identities = 17/33 (51%), Positives = 24/33 (72%)
 Frame = +1

Query: 547 EISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGK 645
           +I +T VW+RLL LPV F+++ +LM I   LGK
Sbjct: 132 DIFTTAVWVRLLNLPVNFYHKAILMEIARGLGK 164



 Score = 28.5 bits (62), Expect(3) = 7e-06
 Identities = 19/54 (35%), Positives = 26/54 (48%)
 Frame = +2

Query: 353 NCVLKLLGRNLSECWSNVSPISCV*NMGSTCLIWKGFVVRFFSKEDYSRTLIGG 514
           N  L++L R L E W  +  I  V       L  + F+VRF  +E+Y   L GG
Sbjct: 61  NVSLQVLSRKLKEMWEPIGAIYVV------DLPRQFFMVRFELEEEYLTALTGG 108



 Score = 27.7 bits (60), Expect(3) = 7e-06
 Identities = 11/26 (42%), Positives = 17/26 (65%)
 Frame = +3

Query: 645 VDETTLLASRGRYAQVCIEIDLQKPL 722
           VD   L   + R+ +VC+E++L KPL
Sbjct: 168 VDARALSFVKARFVRVCVEVNLVKPL 193


Top