BLASTX nr result
ID: Catharanthus23_contig00025466
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Catharanthus23_contig00025466 (899 letters) Database: ./nr 37,332,560 sequences; 13,225,080,153 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protei... 42 6e-07 gb|EOY31426.1| Uncharacterized protein TCM_038365 [Theobroma cacao] 59 2e-06 emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|73210... 35 7e-06 ref|XP_006305928.1| hypothetical protein CARUB_v10011149mg [Caps... 40 7e-06 >gb|EOY25251.1| Zinc ion binding,nucleic acid binding-like protein [Theobroma cacao] Length = 370 Score = 41.6 bits (96), Expect(2) = 6e-07 Identities = 17/30 (56%), Positives = 24/30 (80%) Frame = +3 Query: 645 VDETTLLASRGRYAQVCIEIDLQKPLISMV 734 VD TT ASRG++A++C+E+ L KPL+S V Sbjct: 201 VDRTTAYASRGKFAKMCVELHLNKPLVSKV 230 Score = 39.3 bits (90), Expect(2) = 6e-07 Identities = 15/36 (41%), Positives = 26/36 (72%) Frame = +1 Query: 550 ISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGKWMRL 657 + S WIRL +P+E+++ +L RIGN+LGK +++ Sbjct: 166 VDSIAAWIRLPGMPLEYYDSGILSRIGNELGKTLKV 201 >gb|EOY31426.1| Uncharacterized protein TCM_038365 [Theobroma cacao] Length = 534 Score = 58.9 bits (141), Expect = 2e-06 Identities = 35/109 (32%), Positives = 61/109 (55%), Gaps = 6/109 (5%) Frame = +1 Query: 526 TLGLPSKE--ISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGKWMRL---PCWPPEGGMHR 690 TLG S++ I S WI L +P+E+++ D++ RIGN+LG+ +++ G R Sbjct: 46 TLGFRSEDASIDSVAAWIPLPGMPLEYYDYDVIARIGNELGRTLKIDQTTYQATRGKFAR 105 Query: 691 CALKLICRNH*SPW*EVWAE-KSVEYEGLC*VCFDCGQYDNRMDFCPKR 834 +++ +N P + + VEYEGL +CF CG++ + +D C +R Sbjct: 106 MCVEIDLKNPFVPKIFIGGRWQKVEYEGLRILCFHCGKFGHNIDCCEQR 154 >emb|CAB78007.1| putative protein [Arabidopsis thaliana] gi|7321071|emb|CAB82118.1| putative protein [Arabidopsis thaliana] Length = 404 Score = 35.4 bits (80), Expect(3) = 7e-06 Identities = 15/26 (57%), Positives = 20/26 (76%) Frame = +3 Query: 645 VDETTLLASRGRYAQVCIEIDLQKPL 722 VD T+ RGR+A+VCIE++L KPL Sbjct: 143 VDLNTITFGRGRFARVCIEVNLAKPL 168 Score = 34.3 bits (77), Expect(3) = 7e-06 Identities = 14/37 (37%), Positives = 24/37 (64%) Frame = +1 Query: 547 EISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGKWMRL 657 +I +T VW+RL +PV +++ LL I LGK +++ Sbjct: 107 DIVTTPVWVRLTNIPVNYYHRCLLEEIARGLGKLLKV 143 Score = 26.6 bits (57), Expect(3) = 7e-06 Identities = 11/24 (45%), Positives = 16/24 (66%) Frame = +2 Query: 443 CLIWKGFVVRFFSKEDYSRTLIGG 514 C+I K F++RF +E+Y L GG Sbjct: 60 CMIVKFFMIRFELEEEYLAALTGG 83 >ref|XP_006305928.1| hypothetical protein CARUB_v10011149mg [Capsella rubella] gi|482574639|gb|EOA38826.1| hypothetical protein CARUB_v10011149mg [Capsella rubella] Length = 245 Score = 40.0 bits (92), Expect(3) = 7e-06 Identities = 17/33 (51%), Positives = 24/33 (72%) Frame = +1 Query: 547 EISSTMVWIRLLQLPVEFFNEDLLMRIGNKLGK 645 +I +T VW+RLL LPV F+++ +LM I LGK Sbjct: 132 DIFTTAVWVRLLNLPVNFYHKAILMEIARGLGK 164 Score = 28.5 bits (62), Expect(3) = 7e-06 Identities = 19/54 (35%), Positives = 26/54 (48%) Frame = +2 Query: 353 NCVLKLLGRNLSECWSNVSPISCV*NMGSTCLIWKGFVVRFFSKEDYSRTLIGG 514 N L++L R L E W + I V L + F+VRF +E+Y L GG Sbjct: 61 NVSLQVLSRKLKEMWEPIGAIYVV------DLPRQFFMVRFELEEEYLTALTGG 108 Score = 27.7 bits (60), Expect(3) = 7e-06 Identities = 11/26 (42%), Positives = 17/26 (65%) Frame = +3 Query: 645 VDETTLLASRGRYAQVCIEIDLQKPL 722 VD L + R+ +VC+E++L KPL Sbjct: 168 VDARALSFVKARFVRVCVEVNLVKPL 193