BLASTX nr result
ID: Catharanthus23_contig00025428
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025428
(513 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis] 72 1e-21
emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group] 69 2e-21
gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsi... 64 2e-21
gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-... 69 4e-21
gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subc... 69 4e-21
emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera] 65 9e-21
gb|AFB73911.1| polyprotein [Citrus sinensis] 70 1e-20
gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subc... 69 1e-20
emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera] 62 2e-20
emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera] 61 2e-20
gb|AFB73912.1| polyprotein [Citrus sinensis] 69 3e-20
emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera] 62 3e-20
emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera] 67 3e-20
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula] 67 4e-20
emb|CAN79526.1| hypothetical protein VITISV_001135 [Vitis vinifera] 61 4e-20
gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidop... 62 6e-20
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula] 65 8e-20
gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula] 65 8e-20
emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera] 62 9e-20
emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera] 62 9e-20
>emb|CAJ09951.2| putative gag-pol polyprotein [Citrus sinensis]
Length = 1334
Score = 72.4 bits (176), Expect(2) = 1e-21
Identities = 35/77 (45%), Positives = 56/77 (72%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA K K ++ +LK+ LK+EF++KDLG A RIL M+I+++R +L +SQG +KK
Sbjct: 1013 VDDMLIASKYKSEIERLKNLLKAEFEMKDLGNAKRILGMDIIRDRSAGTLFLSQGKYIKK 1072
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F + CK V T +
Sbjct: 1073 VLERFEMQDCKPVQTPL 1089
Score = 56.2 bits (134), Expect(2) = 1e-21
Identities = 22/57 (38%), Positives = 39/57 (68%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ PY ++ S+MY+M+ TR DIA+ ++++S ++S P K H A+KW + YLK
Sbjct: 1104 ESQMNEFPYAQAVGSLMYAMVCTRSDIAYAVSVVSRYLSCPGKVHWNAVKWIMRYLK 1160
>emb|CAH66122.1| OSIGBa0146N20.7 [Oryza sativa Indica Group]
Length = 1335
Score = 68.6 bits (166), Expect(2) = 2e-21
Identities = 35/75 (46%), Positives = 54/75 (72%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA K K ++ KLK L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK
Sbjct: 1017 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1076
Query: 182 IVLKFSVDSCKSVCT 226
++ +F++ + K+V T
Sbjct: 1077 VLQRFNMQNAKAVST 1091
Score = 59.3 bits (142), Expect(2) = 2e-21
Identities = 22/54 (40%), Positives = 41/54 (75%)
Frame = +3
Query: 291 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H AL+W YL+
Sbjct: 1114 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRALQWIFRYLR 1167
>gb|AAD23690.1| putative retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1333
Score = 63.9 bits (154), Expect(2) = 2e-21
Identities = 32/77 (41%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+L+A K K+ + +LK L FD+KDLG A RIL M I++NR+ ++L +SQ L K
Sbjct: 1013 VDDMLVAAKNKEDISQLKEELSQRFDMKDLGAAKRILGMEIIRNREENTLWLSQNGYLNK 1072
Query: 182 IVLKFSVDSCKSVCTSM 232
I+ +++ K V T +
Sbjct: 1073 ILETYNMAESKHVVTPL 1089
Score = 63.9 bits (154), Expect(2) = 2e-21
Identities = 23/52 (44%), Positives = 39/52 (75%)
Frame = +3
Query: 297 NLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
++PY ++ S+MY+MI TRPD+A+P+ ++S +MS P ++H +KW L Y+K
Sbjct: 1112 SIPYSSAVGSIMYAMIGTRPDLAYPVGIISRYMSQPAREHWLGVKWVLRYIK 1163
>gb|AAX92861.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
Japonica Group] gi|77549942|gb|ABA92739.1|
retrotransposon protein, putative, Ty1-copia subclass
[Oryza sativa Japonica Group]
Length = 1373
Score = 68.6 bits (166), Expect(2) = 4e-21
Identities = 35/75 (46%), Positives = 54/75 (72%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA K K ++ KLK L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK
Sbjct: 1015 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1074
Query: 182 IVLKFSVDSCKSVCT 226
++ +F++ + K+V T
Sbjct: 1075 VLQRFNMQNAKAVST 1089
Score = 58.2 bits (139), Expect(2) = 4e-21
Identities = 21/54 (38%), Positives = 41/54 (75%)
Frame = +3
Query: 291 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H A++W YL+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLR 1165
>gb|ABA98656.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 68.6 bits (166), Expect(2) = 4e-21
Identities = 35/75 (46%), Positives = 54/75 (72%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA K K ++ KLK L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK
Sbjct: 1015 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILGMEISRDRKSGLLFLSQHNYIKK 1074
Query: 182 IVLKFSVDSCKSVCT 226
++ +F++ + K+V T
Sbjct: 1075 VLQRFNMQNAKAVST 1089
Score = 58.2 bits (139), Expect(2) = 4e-21
Identities = 21/54 (38%), Positives = 41/54 (75%)
Frame = +3
Query: 291 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H A++W YL+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRAVQWIFRYLR 1165
>emb|CAN72400.1| hypothetical protein VITISV_041204 [Vitis vinifera]
Length = 1067
Score = 65.1 bits (157), Expect(3) = 9e-21
Identities = 28/57 (49%), Positives = 40/57 (70%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS PRK H A+KW L YLK
Sbjct: 935 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPRKQHWEAVKWILRYLK 991
Score = 58.2 bits (139), Expect(3) = 9e-21
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA +K+ LK L +F +KDLG A +IL M I++++ N +L +SQ +KK
Sbjct: 841 VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKTNGTLKLSQSEYVKK 900
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F+++ K V T +
Sbjct: 901 VLSRFNMNEAKPVSTPL 917
Score = 22.3 bits (46), Expect(3) = 9e-21
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFER 285
SHF+LS P+T+ ER
Sbjct: 919 SHFKLSKXQSPKTEEER 935
>gb|AFB73911.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 70.5 bits (171), Expect(2) = 1e-20
Identities = 36/81 (44%), Positives = 57/81 (70%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+L+A KD++ +LK+ L EF++KDLG A++IL M I ++R N + +SQ LKK
Sbjct: 990 VDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNMKIWLSQKNYLKK 1049
Query: 182 IVLKFSVDSCKSVCTSM*VIF 244
I+ +F++ CKS+ TS+ V F
Sbjct: 1050 ILRRFNMQDCKSISTSLPVNF 1070
Score = 55.1 bits (131), Expect(2) = 1e-20
Identities = 23/57 (40%), Positives = 41/57 (71%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+KE++ +PY ++ S+M++MI TRPDIA + ++S +M+NP +H A+K L Y++
Sbjct: 1084 RKEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGGEHWIAVKRILRYIR 1140
>gb|ABA98804.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1333
Score = 68.6 bits (166), Expect(2) = 1e-20
Identities = 35/75 (46%), Positives = 54/75 (72%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA K K ++ KLK L SEFD+KDLG+A +IL M I ++RK+ L +SQ +KK
Sbjct: 1015 VDDMLIAAKSKIEITKLKKLLSSEFDMKDLGSAKKILVMEISRDRKSGLLFLSQHNYIKK 1074
Query: 182 IVLKFSVDSCKSVCT 226
++ +F++ + K+V T
Sbjct: 1075 VLQRFNMQNAKAVST 1089
Score = 56.6 bits (135), Expect(2) = 1e-20
Identities = 20/54 (37%), Positives = 40/54 (74%)
Frame = +3
Query: 291 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
++ +PY ++ S+MY+M+ +RPD+++ ++L+S +MSNP K+H ++W YL+
Sbjct: 1112 MSRVPYSSAVGSLMYAMVCSRPDLSYAMSLVSRYMSNPGKEHWRVVQWIFRYLR 1165
>emb|CAN62181.1| hypothetical protein VITISV_044399 [Vitis vinifera]
Length = 1264
Score = 62.4 bits (150), Expect(3) = 2e-20
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 1040 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHXEAVKWILRYLK 1096
Score = 59.3 bits (142), Expect(3) = 2e-20
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA +K+ LK L +F +KDLG A +IL M I++++ N +L +SQ +KK
Sbjct: 946 VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRBKANGTLKLSQSEYVKK 1005
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F+++ K V T +
Sbjct: 1006 VLSRFNMNEAKPVSTPL 1022
Score = 23.1 bits (48), Expect(3) = 2e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFER 285
SHF+LS + P+T+ ER
Sbjct: 1024 SHFKLSKEQSPKTEEER 1040
>emb|CAN76896.1| hypothetical protein VITISV_010605 [Vitis vinifera]
Length = 1146
Score = 61.2 bits (147), Expect(3) = 2e-20
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 922 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSIFMSRPGKQHWEAVKWILRYLK 978
Score = 60.1 bits (144), Expect(3) = 2e-20
Identities = 30/77 (38%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA +K+ LK L +F +KDLG A +IL M I++N+ N +L +SQ +KK
Sbjct: 828 VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRNKANGTLKLSQSEYVKK 887
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F+++ K V T +
Sbjct: 888 VLSRFNMNEAKPVSTPL 904
Score = 23.1 bits (48), Expect(3) = 2e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFER 285
SHF+LS + P+T+ ER
Sbjct: 906 SHFKLSKEQSPKTEEER 922
>gb|AFB73912.1| polyprotein [Citrus sinensis]
Length = 1309
Score = 69.3 bits (168), Expect(3) = 3e-20
Identities = 35/81 (43%), Positives = 56/81 (69%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+L+A KD++ +LK+ L EF++KDLG A++IL M I ++R N + +SQ LKK
Sbjct: 990 VDDMLVAGPNKDRIQELKAQLAREFEMKDLGPANKILGMQIHRDRNNRKIWLSQKNYLKK 1049
Query: 182 IVLKFSVDSCKSVCTSM*VIF 244
I+ +F++ CKS+ T + V F
Sbjct: 1050 ILRRFNMQDCKSISTPLPVNF 1070
Score = 54.3 bits (129), Expect(3) = 3e-20
Identities = 23/57 (40%), Positives = 40/57 (70%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+KE++ +PY ++ S+M++MI TRPDIA + +S +M+NP +H A+K L Y++
Sbjct: 1084 RKEMSRVPYASAVGSLMFAMICTRPDIAQAVGAVSRYMANPGGEHWIAVKRILRYIR 1140
Score = 20.4 bits (41), Expect(3) = 3e-20
Identities = 8/19 (42%), Positives = 13/19 (68%)
Frame = +1
Query: 238 HFQLSSKTRPETDFERKKL 294
+F+LSS P + ERK++
Sbjct: 1069 NFKLSSSMCPSNEAERKEM 1087
>emb|CAN60796.1| hypothetical protein VITISV_015834 [Vitis vinifera]
Length = 1186
Score = 62.4 bits (150), Expect(3) = 3e-20
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 754 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLK 810
Score = 58.5 bits (140), Expect(3) = 3e-20
Identities = 29/77 (37%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA +K+ LK L +F +KDLG A +IL M I++++ N +L +SQ +KK
Sbjct: 660 VDDMLIAGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANSTLKLSQSEYVKK 719
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F+++ K V T +
Sbjct: 720 VLSRFNMNEAKPVSTPL 736
Score = 23.1 bits (48), Expect(3) = 3e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFER 285
SHF+LS + P+T+ ER
Sbjct: 738 SHFKLSKEQSPKTEEER 754
>emb|CAN72704.1| hypothetical protein VITISV_016225 [Vitis vinifera]
Length = 817
Score = 67.0 bits (162), Expect(2) = 3e-20
Identities = 32/73 (43%), Positives = 54/73 (73%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+L+ACK K ++ ++K LKSEFD+ DLG A RIL M I++N+++ +L SQ L+K
Sbjct: 514 VDDMLLACKDKSQIQEVKRILKSEFDMIDLGNARRILGMEIVRNKEDSTLFFSQKGYLEK 573
Query: 182 IVLKFSVDSCKSV 220
++ +FS+++ K +
Sbjct: 574 VLKRFSMENSKPI 586
Score = 57.0 bits (136), Expect(2) = 3e-20
Identities = 22/57 (38%), Positives = 40/57 (70%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ E+ +PY SI S+MY+M+ +RP+I+ +++LS F +NP ++H +KW L Y++
Sbjct: 608 RNEMNYVPYANSIGSLMYAMVCSRPNISHSVSVLSRFTANPSREHWNGVKWLLQYVR 664
>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 66.6 bits (161), Expect(2) = 4e-20
Identities = 33/81 (40%), Positives = 55/81 (67%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+DIL+ KD++ +LK+ L EFD+KDLG A++IL M I ++RK+ + +SQ L+K
Sbjct: 986 VDDILVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRK 1045
Query: 182 IVLKFSVDSCKSVCTSM*VIF 244
++ +F++ CK + T + V F
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNF 1066
Score = 57.0 bits (136), Expect(2) = 4e-20
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ E++ +PY ++ S+MY+MI TRPDIA + ++S FM++P K+H A+K + Y+K
Sbjct: 1080 RMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIK 1136
>emb|CAN79526.1| hypothetical protein VITISV_001135 [Vitis vinifera]
Length = 965
Score = 61.2 bits (147), Expect(3) = 4e-20
Identities = 31/77 (40%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LIA +K+ LK L +F +KDLG A +IL M I++N+ N +L +SQ +KK
Sbjct: 717 VDDMLIAGSSIEKINNLKKQLSKQFVMKDLGAAKKILGMRIIRNKTNGTLKLSQSEYVKK 776
Query: 182 IVLKFSVDSCKSVCTSM 232
+V +F+++ K V T +
Sbjct: 777 VVSRFNMNEAKPVSTPL 793
Score = 60.8 bits (146), Expect(3) = 4e-20
Identities = 27/54 (50%), Positives = 38/54 (70%)
Frame = +3
Query: 291 ITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
++ + Y +I S+MY+M+ TRPDIA + ++S FMS PRK H A+KW L YLK
Sbjct: 814 MSKVSYASTIGSLMYAMVCTRPDIAHAVGVVSRFMSRPRKQHWEAVKWSLRYLK 867
Score = 21.2 bits (43), Expect(3) = 4e-20
Identities = 8/16 (50%), Positives = 12/16 (75%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFE 282
SHF+LS + P+T+ E
Sbjct: 795 SHFKLSKEQSPKTEEE 810
>gb|AAC62132.1| copia-like retroelement pol polyprotein [Arabidopsis thaliana]
Length = 1137
Score = 62.0 bits (149), Expect(2) = 6e-20
Identities = 35/77 (45%), Positives = 50/77 (64%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+DILIA + K + LK+ L SEF++KDLG A +IL M I+++RK ++ ISQ L K
Sbjct: 833 VDDILIASRDKRTVCDLKALLNSEFEMKDLGDAKKILGMEIVRDRKAGTMSISQEGYLLK 892
Query: 182 IVLKFSVDSCKSVCTSM 232
++ F +D K V T M
Sbjct: 893 VLGNFGMDQAKPVFTPM 909
Score = 60.8 bits (146), Expect(2) = 6e-20
Identities = 25/51 (49%), Positives = 37/51 (72%)
Frame = +3
Query: 300 LPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+PY+ ++ S+MYSMI TRPD+A + L+ FMS P K+H A+KW L Y++
Sbjct: 933 VPYQSAVGSLMYSMIGTRPDLAHSVGLVCRFMSKPLKEHWQAVKWILRYIR 983
>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 65.5 bits (158), Expect(2) = 8e-20
Identities = 32/81 (39%), Positives = 55/81 (67%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+L+ KD++ +LK+ L EFD+KDLG A++IL M I ++RK+ + +SQ L+K
Sbjct: 986 VDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRK 1045
Query: 182 IVLKFSVDSCKSVCTSM*VIF 244
++ +F++ CK + T + V F
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNF 1066
Score = 57.0 bits (136), Expect(2) = 8e-20
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ E++ +PY ++ S+MY+MI TRPDIA + ++S FM++P K+H A+K + Y+K
Sbjct: 1080 RMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIK 1136
>gb|ACL97384.1| Gag-Pol polyprotein [Medicago truncatula]
Length = 1305
Score = 65.5 bits (158), Expect(2) = 8e-20
Identities = 32/81 (39%), Positives = 55/81 (67%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+L+ KD++ +LK+ L EFD+KDLG A++IL M I ++RK+ + +SQ L+K
Sbjct: 986 VDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRK 1045
Query: 182 IVLKFSVDSCKSVCTSM*VIF 244
++ +F++ CK + T + V F
Sbjct: 1046 VLRRFNMQDCKPISTPLPVNF 1066
Score = 57.0 bits (136), Expect(2) = 8e-20
Identities = 24/57 (42%), Positives = 41/57 (71%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ E++ +PY ++ S+MY+MI TRPDIA + ++S FM++P K+H A+K + Y+K
Sbjct: 1080 RMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRIMRYIK 1136
>emb|CAN76321.1| hypothetical protein VITISV_044445 [Vitis vinifera]
Length = 1279
Score = 62.4 bits (150), Expect(3) = 9e-20
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 1055 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLK 1111
Score = 56.6 bits (135), Expect(3) = 9e-20
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LI +K+ LK L +F +KDLG A +IL M I++++ N +L +SQ +KK
Sbjct: 961 VDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKK 1020
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F+++ K V T +
Sbjct: 1021 VLSRFNMNEAKPVSTPL 1037
Score = 23.1 bits (48), Expect(3) = 9e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFER 285
SHF+LS + P+T+ ER
Sbjct: 1039 SHFKLSKEQSPKTEEER 1055
>emb|CAN74702.1| hypothetical protein VITISV_023139 [Vitis vinifera]
Length = 1222
Score = 62.4 bits (150), Expect(3) = 9e-20
Identities = 27/57 (47%), Positives = 39/57 (68%)
Frame = +3
Query: 282 KKEITNLPYRMSIRSVMYSMISTRPDIAFPINLLSHFMSNPRKDH*TALKWFLSYLK 452
+ ++ +PY +I S+MY+M+ TRPDIA + ++S FMS P K H A+KW L YLK
Sbjct: 998 RDHMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRFMSRPGKQHWEAVKWILRYLK 1054
Score = 56.6 bits (135), Expect(3) = 9e-20
Identities = 28/77 (36%), Positives = 49/77 (63%)
Frame = +2
Query: 2 VNDILIACK*KDKLIKLKSHLKSEFDIKDLGTASRILEMNILKNRKNHSLIISQGPILKK 181
V+D+LI +K+ LK L +F +KDLG A +IL M I++++ N +L +SQ +KK
Sbjct: 904 VDDMLIVGSDIEKINNLKKQLSKQFAMKDLGAAKQILGMRIIRDKANGTLKLSQSEYVKK 963
Query: 182 IVLKFSVDSCKSVCTSM 232
++ +F+++ K V T +
Sbjct: 964 VLSRFNMNEAKPVSTPL 980
Score = 23.1 bits (48), Expect(3) = 9e-20
Identities = 9/17 (52%), Positives = 13/17 (76%)
Frame = +1
Query: 235 SHFQLSSKTRPETDFER 285
SHF+LS + P+T+ ER
Sbjct: 982 SHFKLSKEQSPKTEEER 998