BLASTX nr result
ID: Catharanthus23_contig00025394
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025394
(1061 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|EOY07016.1| RNA-binding family protein [Theobroma cacao] 94 9e-17
gb|EMJ27769.1| hypothetical protein PRUPE_ppa024322mg [Prunus pe... 90 2e-15
ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleop... 89 3e-15
ref|XP_002327956.1| predicted protein [Populus trichocarpa] gi|5... 88 7e-15
gb|ESW11156.1| hypothetical protein PHAVU_008G006500g [Phaseolus... 87 1e-14
ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, pu... 87 1e-14
ref|XP_006495303.1| PREDICTED: U11/U12 small nuclear ribonucleop... 86 3e-14
ref|XP_006494202.1| PREDICTED: U11/U12 small nuclear ribonucleop... 86 3e-14
ref|XP_006364676.1| PREDICTED: U11/U12 small nuclear ribonucleop... 85 6e-14
ref|XP_006450017.1| hypothetical protein CICLE_v10013958mg [Citr... 85 6e-14
ref|XP_006443096.1| hypothetical protein CICLE_v10020999mg [Citr... 85 6e-14
ref|XP_006443089.1| hypothetical protein CICLE_v10021004mg [Citr... 85 6e-14
ref|XP_004247986.1| PREDICTED: uncharacterized protein LOC101256... 84 7e-14
ref|XP_003530916.1| PREDICTED: U11/U12 small nuclear ribonucleop... 84 1e-13
ref|XP_003551845.1| PREDICTED: U11/U12 small nuclear ribonucleop... 82 3e-13
ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [S... 82 4e-13
ref|XP_006660840.1| PREDICTED: U11/U12 small nuclear ribonucleop... 82 5e-13
ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleop... 82 5e-13
tpg|DAA62263.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea m... 79 3e-12
ref|NP_001169404.1| hypothetical protein [Zea mays] gi|224029143... 79 3e-12
>gb|EOY07016.1| RNA-binding family protein [Theobroma cacao]
Length = 338
Score = 94.0 bits (232), Expect = 9e-17
Identities = 41/52 (78%), Positives = 48/52 (92%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR 905
FRAPLRQIP++DLK LGI PPPEGRYMSRFQVPSPPR+ R+SV+ E+YSH+R
Sbjct: 173 FRAPLRQIPYEDLKTLGIRPPPEGRYMSRFQVPSPPRKRRSSVEKEEYSHKR 224
>gb|EMJ27769.1| hypothetical protein PRUPE_ppa024322mg [Prunus persica]
Length = 309
Score = 89.7 bits (221), Expect = 2e-15
Identities = 41/58 (70%), Positives = 47/58 (81%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRKEHTAA 887
FRAPLR IP+DDL+RLGI PPPEGRYMSR+QVPSPPRR+R SVD E+ H+R A
Sbjct: 174 FRAPLRSIPYDDLERLGIPPPPEGRYMSRYQVPSPPRRKRNSVDREEGIHKRSMERGA 231
>ref|XP_002263044.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein
[Vitis vinifera] gi|297743756|emb|CBI36639.3| unnamed
protein product [Vitis vinifera]
Length = 340
Score = 89.0 bits (219), Expect = 3e-15
Identities = 40/51 (78%), Positives = 45/51 (88%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHR 908
FRAPLR IP DDLKRLGI PPPEGRYMSRFQVP PPRR+R+++D E+ SHR
Sbjct: 172 FRAPLRPIPLDDLKRLGIPPPPEGRYMSRFQVPPPPRRKRSNMDREEPSHR 222
>ref|XP_002327956.1| predicted protein [Populus trichocarpa]
gi|566211726|ref|XP_006372915.1| U1 small nuclear
ribonucleoprotein 70 kDa [Populus trichocarpa]
gi|550319563|gb|ERP50712.1| U1 small nuclear
ribonucleoprotein 70 kDa [Populus trichocarpa]
Length = 317
Score = 87.8 bits (216), Expect = 7e-15
Identities = 39/52 (75%), Positives = 46/52 (88%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR 905
FRAPL+ IP+DDLKRLGI PPPEGRYMS ++VPSPPRR+R+S D E+ SHRR
Sbjct: 172 FRAPLQTIPYDDLKRLGIPPPPEGRYMSHYEVPSPPRRKRSSRDKEESSHRR 223
>gb|ESW11156.1| hypothetical protein PHAVU_008G006500g [Phaseolus vulgaris]
Length = 338
Score = 87.0 bits (214), Expect = 1e-14
Identities = 38/53 (71%), Positives = 46/53 (86%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRK 902
FRAPL+ IP+++LK+LGI PPPEGRYMSRFQVPSPPRRER+ D E+ SHR +
Sbjct: 174 FRAPLKSIPYEELKKLGIPPPPEGRYMSRFQVPSPPRRERSLSDREEDSHRHR 226
>ref|XP_002529752.1| U1 small nuclear ribonucleoprotein 70 kD, putative [Ricinus communis]
gi|223530750|gb|EEF32618.1| U1 small nuclear
ribonucleoprotein 70 kD, putative [Ricinus communis]
Length = 389
Score = 87.0 bits (214), Expect = 1e-14
Identities = 40/53 (75%), Positives = 47/53 (88%), Gaps = 1/53 (1%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHED-YSHRR 905
FRAPL+ +PFD+LKRLGISPPPEGRYMSRF VPSPPRR ++S+D E+ SHRR
Sbjct: 172 FRAPLQSVPFDELKRLGISPPPEGRYMSRFGVPSPPRRNQSSIDREEGSSHRR 224
>ref|XP_006495303.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Citrus sinensis]
Length = 339
Score = 85.5 bits (210), Expect = 3e-14
Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR-----KEH 896
FRAPLR IPFD+LKRLGI PPPEGRYMSRFQVPSPPR R S++ E+ + R +EH
Sbjct: 172 FRAPLRPIPFDELKRLGIPPPPEGRYMSRFQVPSPPRSRRCSIEKEENTRSRSLKHSEEH 231
Query: 895 T 893
T
Sbjct: 232 T 232
>ref|XP_006494202.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Citrus sinensis]
Length = 359
Score = 85.5 bits (210), Expect = 3e-14
Identities = 41/61 (67%), Positives = 47/61 (77%), Gaps = 5/61 (8%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR-----KEH 896
FRAPLR IPFD+LKRLGI PPPEGRYMSRFQVPSPPR R S++ E+ + R +EH
Sbjct: 192 FRAPLRPIPFDELKRLGIPPPPEGRYMSRFQVPSPPRSRRCSIEKEENTRSRSLKHSEEH 251
Query: 895 T 893
T
Sbjct: 252 T 252
>ref|XP_006364676.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Solanum tuberosum]
Length = 352
Score = 84.7 bits (208), Expect = 6e-14
Identities = 39/51 (76%), Positives = 42/51 (82%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHR 908
FRAPLR IP+DDLKRLGI PPPEGRYMSRFQ PSPPRR R+ D D SH+
Sbjct: 181 FRAPLRPIPWDDLKRLGIPPPPEGRYMSRFQAPSPPRRARSLEDARDSSHK 231
>ref|XP_006450017.1| hypothetical protein CICLE_v10013958mg [Citrus clementina]
gi|557553189|gb|ESR63257.1| hypothetical protein
CICLE_v10013958mg [Citrus clementina]
Length = 221
Score = 84.7 bits (208), Expect = 6e-14
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR 905
FRAPLR IPFD+LKRLGI PPPEGRYMSRFQVPSPPR +R S++ E+ + R
Sbjct: 54 FRAPLRPIPFDELKRLGIPPPPEGRYMSRFQVPSPPRSKRCSIEKEENTRSR 105
>ref|XP_006443096.1| hypothetical protein CICLE_v10020999mg [Citrus clementina]
gi|557545358|gb|ESR56336.1| hypothetical protein
CICLE_v10020999mg [Citrus clementina]
Length = 339
Score = 84.7 bits (208), Expect = 6e-14
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR 905
FRAPLR IPFD+LKRLGI PPPEGRYMSRFQVPSPPR +R S++ E+ + R
Sbjct: 172 FRAPLRPIPFDELKRLGIPPPPEGRYMSRFQVPSPPRSKRCSIEKEENTRSR 223
>ref|XP_006443089.1| hypothetical protein CICLE_v10021004mg [Citrus clementina]
gi|557545351|gb|ESR56329.1| hypothetical protein
CICLE_v10021004mg [Citrus clementina]
Length = 339
Score = 84.7 bits (208), Expect = 6e-14
Identities = 38/52 (73%), Positives = 44/52 (84%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRR 905
FRAPLR IPFD+LKRLGI PPPEGRYMSRFQVPSPPR +R S++ E+ + R
Sbjct: 172 FRAPLRPIPFDELKRLGIPPPPEGRYMSRFQVPSPPRSKRCSIEKEENTRSR 223
>ref|XP_004247986.1| PREDICTED: uncharacterized protein LOC101256810 [Solanum
lycopersicum]
Length = 355
Score = 84.3 bits (207), Expect = 7e-14
Identities = 39/56 (69%), Positives = 44/56 (78%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRKEHT 893
FRAPLR IP+DDLKRLGI PPPEGRYMSRFQ PSPPRR R+ D D SH+ + +
Sbjct: 181 FRAPLRPIPWDDLKRLGIPPPPEGRYMSRFQAPSPPRRARSLEDAGDSSHKHDKRS 236
>ref|XP_003530916.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Glycine max]
Length = 358
Score = 83.6 bits (205), Expect = 1e-13
Identities = 39/54 (72%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHED--YSHRR 905
FRAPL+ IP+++LK+LGI PPPEGRYMSRFQVPSPPRRER D E+ +SHRR
Sbjct: 174 FRAPLKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRRERNLSDREEDSHSHRR 227
>ref|XP_003551845.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Glycine max]
Length = 347
Score = 82.4 bits (202), Expect = 3e-13
Identities = 38/54 (70%), Positives = 46/54 (85%), Gaps = 2/54 (3%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHED--YSHRR 905
FRAPL+ IP+++LK+LGI PPPEGRYMSRFQVPSPPR ER+ D E+ +SHRR
Sbjct: 174 FRAPLKPIPYEELKKLGIPPPPEGRYMSRFQVPSPPRSERSLSDREEDSHSHRR 227
>ref|XP_002460516.1| hypothetical protein SORBIDRAFT_02g029740 [Sorghum bicolor]
gi|241923893|gb|EER97037.1| hypothetical protein
SORBIDRAFT_02g029740 [Sorghum bicolor]
Length = 437
Score = 82.0 bits (201), Expect = 4e-13
Identities = 37/58 (63%), Positives = 45/58 (77%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRKEHTAA 887
FRAPLR IP+D+LK+LGI PPPEGRYM+R+QVP PPRR+ + VD ED RR+ A
Sbjct: 172 FRAPLRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSKVDIEDSPPRRRSKDGA 229
>ref|XP_006660840.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Oryza brachyantha]
Length = 367
Score = 81.6 bits (200), Expect = 5e-13
Identities = 36/53 (67%), Positives = 44/53 (83%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRK 902
FRAPLR IP+D+LKRLGI PPPEGRYM RFQVP PPRR+ +++D E+ RR+
Sbjct: 172 FRAPLRPIPYDELKRLGIPPPPEGRYMLRFQVPPPPRRKGSNIDREESPPRRR 224
>ref|XP_004147652.1| PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa
protein-like [Cucumis sativus]
gi|449498819|ref|XP_004160643.1| PREDICTED: U11/U12 small
nuclear ribonucleoprotein 35 kDa protein-like [Cucumis
sativus]
Length = 333
Score = 81.6 bits (200), Expect = 5e-13
Identities = 37/53 (69%), Positives = 44/53 (83%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRK 902
FRAPLR IP+DDLKRLGI+PPPEGRY SRFQ+PSPPRRE S E+ S++ +
Sbjct: 172 FRAPLRPIPYDDLKRLGITPPPEGRYKSRFQIPSPPRRETDSERREEGSNKNE 224
>tpg|DAA62263.1| TPA: hypothetical protein ZEAMMB73_967106 [Zea mays]
Length = 385
Score = 79.0 bits (193), Expect = 3e-12
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRKEHTAA 887
FRAPLR IP+D+LK+LGI PPPEGRYM+R+QVP PPRR+ +++D ED R+ A
Sbjct: 74 FRAPLRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSNIDIEDSPPGRRSKDRA 131
>ref|NP_001169404.1| hypothetical protein [Zea mays] gi|224029143|gb|ACN33647.1| unknown
[Zea mays] gi|414886248|tpg|DAA62262.1| TPA: hypothetical
protein ZEAMMB73_967106 [Zea mays]
Length = 483
Score = 79.0 bits (193), Expect = 3e-12
Identities = 35/58 (60%), Positives = 45/58 (77%)
Frame = -2
Query: 1060 FRAPLRQIPFDDLKRLGISPPPEGRYMSRFQVPSPPRRERASVDHEDYSHRRKEHTAA 887
FRAPLR IP+D+LK+LGI PPPEGRYM+R+QVP PPRR+ +++D ED R+ A
Sbjct: 172 FRAPLRPIPYDELKKLGIPPPPEGRYMTRYQVPPPPRRKSSNIDIEDSPPGRRSKDRA 229