BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025334
         (707 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobrom...   172   8e-64
gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobrom...   169   5e-63
gb|EOY21236.1| Uncharacterized protein TCM_012637 [Theobroma cacao]   172   5e-63
gb|EOY08653.1| DNA/RNA polymerases superfamily protein [Theobrom...   167   6e-62
gb|EOX94092.1| Gag protease polyprotein [Theobroma cacao]             165   1e-61
gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobrom...   166   1e-60
gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobrom...   164   5e-60
gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobrom...   161   3e-59
gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobrom...   162   4e-59
gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobrom...   155   6e-59
gb|AAX95261.1| retrotransposon protein, putative, Ty3-gypsy sub-...   158   7e-59
gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, puta...   161   8e-59
gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobrom...   161   8e-59
gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]   160   8e-59
emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]           155   1e-58
gb|ADB85337.1| putative retrotransposon protein [Phyllostachys e...   157   1e-58
gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Ja...   156   2e-58
gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Ory...   156   2e-58
dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana...   141   2e-58
gb|EMJ22433.1| hypothetical protein PRUPE_ppb019121mg [Prunus pe...   150   2e-58

>gb|EOX93994.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 811

 Score =  172 bits (435), Expect(2) = 8e-64
 Identities = 80/136 (58%), Positives = 105/136 (77%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW GMKR+IA++VA C TCQ++KAE+QKS+  LQPLP+PEWKW++V +D V    RT+  
Sbjct: 528 WWPGMKRDIAKFVAKCLTCQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLPRTQSG 587

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
           KDAIWVIVD+L K AHF+AI+  Y +++LA +YI+E+V LHGV   I+ DR   FTSRFW
Sbjct: 588 KDAIWVIVDRLTKSAHFLAIHSTYSIERLARLYIDEVVRLHGVPISIVSDRDPRFTSRFW 647

Query: 345 RKFQSAM*TKLSYSTT 298
            KFQ A+ TKL +ST+
Sbjct: 648 PKFQEALGTKLRFSTS 663



 Score = 99.0 bits (245), Expect(2) = 8e-64
 Identities = 46/74 (62%), Positives = 55/74 (74%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMAP+EA  GR
Sbjct: 665 HPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGR 724

Query: 113 RCKTPLYWDEFGVR 72
           +C+TPL WDE G R
Sbjct: 725 KCRTPLCWDEVGER 738


>gb|EOY00215.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1537

 Score =  169 bits (428), Expect(2) = 5e-63
 Identities = 80/135 (59%), Positives = 103/135 (76%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW GM+R+IAE+VA C TCQ++KAE+QK +  LQPL +PEWKW++V +D V    RT+  
Sbjct: 1127 WWPGMERDIAEFVAKCLTCQQIKAEHQKPSGTLQPLSIPEWKWEHVTMDFVLGLPRTQSG 1186

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            KDAIWVIVD+L K AHF+AI+  Y +++LA +YI+EIV LHGV   I+ DR L FTSRFW
Sbjct: 1187 KDAIWVIVDRLTKSAHFLAIHSTYSIERLARLYIDEIVRLHGVPVSIVSDRDLRFTSRFW 1246

Query: 345  RKFQSAM*TKLSYST 301
             KFQ A+ TKL +ST
Sbjct: 1247 PKFQEALGTKLRFST 1261



 Score = 99.0 bits (245), Expect(2) = 5e-63
 Identities = 46/74 (62%), Positives = 55/74 (74%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMAP+EA  GR
Sbjct: 1264 HPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGR 1323

Query: 113  RCKTPLYWDEFGVR 72
            +C+TPL WDE G R
Sbjct: 1324 KCRTPLCWDEVGER 1337


>gb|EOY21236.1| Uncharacterized protein TCM_012637 [Theobroma cacao]
          Length = 634

 Score =  172 bits (437), Expect(2) = 5e-63
 Identities = 81/135 (60%), Positives = 104/135 (77%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW G+KR+IAE+VA C TCQ++KAE+QK +  LQPLP+PEWKW++V +D V   SRT+  
Sbjct: 405 WWSGIKRDIAEFVAKCLTCQQIKAEHQKPSSTLQPLPIPEWKWEHVTMDFVLGLSRTQSG 464

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
           KDAIWVIV +L K AHF+AI+  Y ++KLA +YI+EIV LHG+L  I+LDR   FTSRFW
Sbjct: 465 KDAIWVIVYRLTKSAHFLAIHSTYSIEKLARLYIDEIVRLHGILVSIVLDRDPRFTSRFW 524

Query: 345 RKFQSAM*TKLSYST 301
            KFQ  + TKL +ST
Sbjct: 525 PKFQEVLGTKLRFST 539



 Score = 95.5 bits (236), Expect(2) = 5e-63
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMAP++A  GR
Sbjct: 542 HPQTDGQSERTIQTLEDMLRACVIDFTGSWDRHLPLVEFAYNNSFQSSIGMAPYKALYGR 601

Query: 113 RCKTPLYWDEFGVR 72
           +C+TPL WDE   R
Sbjct: 602 KCRTPLCWDEVDER 615


>gb|EOY08653.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1110

 Score =  167 bits (424), Expect(2) = 6e-62
 Identities = 80/135 (59%), Positives = 102/135 (75%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW GMKR+IAE+VA C TCQ++KAE+QK +  LQPLP+PEWKW++V +D V    RT+  
Sbjct: 822  WWPGMKRDIAEFVAKCLTCQQIKAEHQKLSGTLQPLPIPEWKWEHVTMDFVLGLLRTQSG 881

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            KDAIWVIVD+L K AHF+AI+  Y ++KL  +YI+EIV L+GV   I+ DR   FTSRFW
Sbjct: 882  KDAIWVIVDRLTKSAHFLAIHNTYSIEKLVKLYIDEIVRLYGVPISIVSDRDPRFTSRFW 941

Query: 345  RKFQSAM*TKLSYST 301
             KFQ A+ TKL +ST
Sbjct: 942  SKFQEALGTKLRFST 956



 Score = 97.1 bits (240), Expect(2) = 6e-62
 Identities = 45/74 (60%), Positives = 54/74 (72%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMAP+EA  GR
Sbjct: 959  HPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGR 1018

Query: 113  RCKTPLYWDEFGVR 72
            +C+TP  WDE G R
Sbjct: 1019 KCQTPFCWDEVGER 1032


>gb|EOX94092.1| Gag protease polyprotein [Theobroma cacao]
          Length = 269

 Score =  165 bits (417), Expect(2) = 1e-61
 Identities = 79/135 (58%), Positives = 100/135 (74%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW GMKR++AE+VA C  CQ+VKAE+Q+ A  LQ LPVPEWKW++V +D V    RT+  
Sbjct: 27  WWPGMKRDVAEFVAKCLVCQQVKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLPRTQRG 86

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            DAIWVIVD+L K AHF+A++  Y ++KLA +YI+EIV LHGV   I+ DR   FTSRFW
Sbjct: 87  NDAIWVIVDRLTKSAHFLAVHSTYSIEKLAQLYIDEIVRLHGVPVSIVSDRDPRFTSRFW 146

Query: 345 RKFQSAM*TKLSYST 301
            KFQ A+ TKL +ST
Sbjct: 147 LKFQEALGTKLKFST 161



 Score = 99.0 bits (245), Expect(2) = 1e-61
 Identities = 46/74 (62%), Positives = 55/74 (74%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMAP+EA  GR
Sbjct: 164 HPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGR 223

Query: 113 RCKTPLYWDEFGVR 72
           +C+TPL WDE G R
Sbjct: 224 KCRTPLCWDEVGER 237


>gb|EOY26510.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1290

 Score =  166 bits (421), Expect(2) = 1e-60
 Identities = 78/135 (57%), Positives = 102/135 (75%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW GMKR+IAE+VA C  CQ++KAE+QKS+  LQPLP+PEWKW++V +D V    RT+  
Sbjct: 916  WWPGMKRDIAEFVAKCLICQQIKAEHQKSSGTLQPLPIPEWKWEHVTMDFVLGLPRTQSG 975

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            KDAIWVI+ +L K AHF+AI+  Y +++LA +YI+E+V LHGV   I+ DR   FTSRFW
Sbjct: 976  KDAIWVIMGRLTKSAHFLAIHSTYSIERLARLYIDEVVRLHGVPVSIVSDRDPRFTSRFW 1035

Query: 345  RKFQSAM*TKLSYST 301
             KFQ A+ TKL +ST
Sbjct: 1036 PKFQEALGTKLRFST 1050



 Score = 93.6 bits (231), Expect(2) = 1e-60
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQ DG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMA +EA  GR
Sbjct: 1053 HPQIDGQSERTIQTLEDMLRACVIDFIRSWDRHLPLVEFAYNNSFQSSIGMATYEALYGR 1112

Query: 113  RCKTPLYWDEFGVR 72
            +C+TPL WDE G R
Sbjct: 1113 KCRTPLCWDEVGER 1126


>gb|EOY08678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 666

 Score =  164 bits (415), Expect(2) = 5e-60
 Identities = 74/136 (54%), Positives = 99/136 (72%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW G+KR++AE+V+ C  CQ+VKAE+QK A LLQPLPVPEWKW+++ +D VT   RT G 
Sbjct: 380 WWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGG 439

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            D+IW++VD+L K AHF+++   Y   + A VY++EIV LHG+   I+ DR   FTSRFW
Sbjct: 440 YDSIWIVVDRLTKSAHFLSVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFW 499

Query: 345 RKFQSAM*TKLSYSTT 298
            K Q A+ TKL +STT
Sbjct: 500 GKLQEALGTKLDFSTT 515



 Score = 94.0 bits (232), Expect(2) = 5e-60
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +D G KW   L   EFAYNN++  +I MAPFEA  GR
Sbjct: 517 HPQTDGQSERTIQTLEDMLRACVIDLGVKWEQYLPLVEFAYNNSFQTSIQMAPFEALYGR 576

Query: 113 RCKTPLYWDEFGVR 72
           RC++P+ W E G R
Sbjct: 577 RCRSPIGWLEVGER 590


>gb|EOY03326.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1447

 Score =  161 bits (408), Expect(2) = 3e-59
 Identities = 73/135 (54%), Positives = 97/135 (71%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW G+KR++AE+V+ C  CQ+VKAE+QK A LLQPLPVPEWKW+++ +D VT   RT G 
Sbjct: 1054 WWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGG 1113

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D+IW++VD+L K AHF+ +   Y   + A VY++EIV LHG+   I+ DR   FTSRFW
Sbjct: 1114 YDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFW 1173

Query: 345  RKFQSAM*TKLSYST 301
             K Q A+ TKL +ST
Sbjct: 1174 GKLQEALGTKLDFST 1188



 Score = 94.0 bits (232), Expect(2) = 3e-59
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG SERTIQTLE +LR C +D G +W   L   EFAYNN++  +I MAPFEA  GR
Sbjct: 1191 HPQTDGQSERTIQTLEAMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGR 1250

Query: 113  RCKTPLYWDEFGVR 72
            RC++P+ W E G R
Sbjct: 1251 RCRSPIGWLEVGER 1264


>gb|EOY26451.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 679

 Score =  162 bits (410), Expect(2) = 4e-59
 Identities = 74/135 (54%), Positives = 96/135 (71%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW G+KR++AE+V+ C  CQ+VKAE+QK A LLQPLPVPEWKW+++ +D VT   RT G 
Sbjct: 286 WWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGG 345

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            D+IW++VDQL K AHF+ +   Y     A VY++EIV LHG+   I+ DR   FTSRFW
Sbjct: 346 YDSIWIVVDQLTKSAHFLPVKTTYGAAHYARVYVDEIVRLHGIPISIVSDRGAQFTSRFW 405

Query: 345 RKFQSAM*TKLSYST 301
            K Q A+ TKL +ST
Sbjct: 406 GKLQEALGTKLDFST 420



 Score = 92.8 bits (229), Expect(2) = 4e-59
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +D G +W   L   EFAYNN++  +I MAPFEA  GR
Sbjct: 423 HPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGR 482

Query: 113 RCKTPLYWDEFGVR 72
           RC++P+ W E G R
Sbjct: 483 RCRSPIGWLEVGER 496


>gb|EOX94203.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 1336

 Score =  155 bits (393), Expect(2) = 6e-59
 Identities = 76/130 (58%), Positives = 97/130 (74%)
 Frame = -3

Query: 690  KREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGYKDAIW 511
            +R++AE+VA C  CQ+VKAE+Q+ A  LQ LPVPEWKW++V +D V   SRT+  KD IW
Sbjct: 1037 RRDVAEFVAKCLICQQVKAEHQRPAGTLQSLPVPEWKWEHVTMDFVLGLSRTQRGKDVIW 1096

Query: 510  VIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFWRKFQS 331
            VIVDQL K AHF+A++  Y ++KLA +YI+EIV LHGV   I+ DR   FTSRFW KFQ 
Sbjct: 1097 VIVDQLTKSAHFLAVHSTYSIEKLAQLYIDEIVRLHGVPVSIVSDRDPRFTSRFWPKFQE 1156

Query: 330  AM*TKLSYST 301
            A+ TKL +ST
Sbjct: 1157 ALGTKLKFST 1166



 Score = 99.0 bits (245), Expect(2) = 6e-59
 Identities = 46/74 (62%), Positives = 55/74 (74%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG SERTIQTLE +LR C +DF   W  +L   EFAYNN++  +IGMAP+EA  GR
Sbjct: 1169 HPQTDGQSERTIQTLEDMLRACVIDFIGSWDRHLPLVEFAYNNSFQSSIGMAPYEALYGR 1228

Query: 113  RCKTPLYWDEFGVR 72
            +C+TPL WDE G R
Sbjct: 1229 KCRTPLCWDEVGER 1242


>gb|AAX95261.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
            Japonica Group] gi|62733825|gb|AAX95934.1|
            retrotransposon protein, putative, Ty3-gypsy sub-class
            [Oryza sativa Japonica Group] gi|77550593|gb|ABA93390.1|
            retrotransposon protein, putative, Ty3-gypsy subclass
            [Oryza sativa Japonica Group]
          Length = 1398

 Score =  158 bits (399), Expect(2) = 7e-59
 Identities = 77/135 (57%), Positives = 94/135 (69%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW  MKREIAEYVA C  CQRVKAE+QK A LLQPL +PEWKW+ + +D +T   RT   
Sbjct: 995  WWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSG 1054

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D+IWVIVD+L KVAHFI +N  Y   +LA +Y+  IV LHGV   I+ DR   FTS FW
Sbjct: 1055 HDSIWVIVDRLTKVAHFIPVNTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFW 1114

Query: 345  RKFQSAM*TKLSYST 301
            +K Q  M +KL++ST
Sbjct: 1115 KKLQEEMGSKLNFST 1129



 Score = 96.3 bits (238), Expect(2) = 7e-59
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG +ER  Q LE +LR CALDFG  W  NL  AEF+YNN+Y  ++ MAP+EA  GR
Sbjct: 1132 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPCAEFSYNNSYQASLQMAPYEALYGR 1191

Query: 113  RCKTPLYWDEFGVR 72
            +C+TPL WD+ G R
Sbjct: 1192 KCRTPLLWDQTGER 1205


>gb|EOY08667.1| Retrotransposon protein, Ty3-gypsy subclass, putative [Theobroma
           cacao]
          Length = 521

 Score =  161 bits (408), Expect(2) = 8e-59
 Identities = 73/135 (54%), Positives = 97/135 (71%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW G+KR++AE+V+ C  CQ+VKAE+QK A LLQPLPVPEWKW+++ +D VT   RT G 
Sbjct: 128 WWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGG 187

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            D+IW++VD+L K AHF+ +   Y   + A VY++EIV LHG+   I+ DR   FTSRFW
Sbjct: 188 YDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFW 247

Query: 345 RKFQSAM*TKLSYST 301
            K Q A+ TKL +ST
Sbjct: 248 GKLQEALGTKLDFST 262



 Score = 92.8 bits (229), Expect(2) = 8e-59
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +D G +W   L   EFAYNN++  +I MAPFEA  GR
Sbjct: 265 HPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGR 324

Query: 113 RCKTPLYWDEFGVR 72
           RC++P+ W E G R
Sbjct: 325 RCRSPIGWLEVGER 338


>gb|EOY21678.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
          Length = 448

 Score =  161 bits (408), Expect(2) = 8e-59
 Identities = 73/135 (54%), Positives = 97/135 (71%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW G+KR++AE+V+ C  CQ+VKAE+QK A LLQPLPVPEWKW+++ +D VT   RT G 
Sbjct: 55  WWEGLKRDVAEFVSKCLVCQQVKAEHQKPAGLLQPLPVPEWKWEHIAMDFVTGLPRTSGG 114

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            D+IW++VD+L K AHF+ +   Y   + A VY++EIV LHG+   I+ DR   FTSRFW
Sbjct: 115 YDSIWIVVDRLTKSAHFLPVKTTYGAAQYARVYVDEIVRLHGIPISIVSDRGAQFTSRFW 174

Query: 345 RKFQSAM*TKLSYST 301
            K Q A+ TKL +ST
Sbjct: 175 GKLQEALGTKLDFST 189



 Score = 92.8 bits (229), Expect(2) = 8e-59
 Identities = 44/74 (59%), Positives = 53/74 (71%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +D G +W   L   EFAYNN++  +I MAPFEA  GR
Sbjct: 192 HPQTDGQSERTIQTLEDMLRACVIDLGVRWEQYLPLVEFAYNNSFQTSIQMAPFEALYGR 251

Query: 113 RCKTPLYWDEFGVR 72
           RC++P+ W E G R
Sbjct: 252 RCRSPIGWLEVGER 265


>gb|EOY20280.1| Uncharacterized protein TCM_045699 [Theobroma cacao]
          Length = 415

 Score =  160 bits (405), Expect(2) = 8e-59
 Identities = 72/135 (53%), Positives = 96/135 (71%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW G+KR++AE+V+ C  CQ+VKAE+QK   LLQPLPVPEWKW+++ +D VT   RT G 
Sbjct: 22  WWEGLKRDVAEFVSKCLVCQQVKAEHQKPTGLLQPLPVPEWKWEHIAMDFVTGLPRTSGG 81

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            D+IW++VD+L K AHF+ +   Y   + A VY++EIV LHG+   I+ DR   FTSRFW
Sbjct: 82  YDSIWIVVDRLTKSAHFLLVKTTYGAAQYARVYVDEIVRLHGIPISIVSDREAQFTSRFW 141

Query: 345 RKFQSAM*TKLSYST 301
            K Q A+ TKL +ST
Sbjct: 142 GKLQEALGTKLDFST 156



 Score = 94.0 bits (232), Expect(2) = 8e-59
 Identities = 45/74 (60%), Positives = 53/74 (71%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR C +D G KW   L   EFAYNN++  +I MAPFEA  GR
Sbjct: 159 HPQTDGQSERTIQTLEDMLRACVIDLGVKWEQYLPLVEFAYNNSFQTSIQMAPFEALYGR 218

Query: 113 RCKTPLYWDEFGVR 72
           RC++P+ W E G R
Sbjct: 219 RCRSPIGWLEVGER 232


>emb|CAH65865.1| OSIGBa0132I10.1 [Oryza sativa Indica Group]
          Length = 1670

 Score =  155 bits (393), Expect(2) = 1e-58
 Identities = 76/135 (56%), Positives = 93/135 (68%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW  MKREIAEYVA C  CQRVKAE+QK A LLQPL +PEWKW+ + +D +T   RT   
Sbjct: 1267 WWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSG 1326

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D+IWVIVD+L KVAHFI +   Y   +LA +Y+  IV LHGV   I+ DR   FTS FW
Sbjct: 1327 HDSIWVIVDRLTKVAHFIPVKTTYSGSRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFW 1386

Query: 345  RKFQSAM*TKLSYST 301
            +K Q  M +KL++ST
Sbjct: 1387 KKLQEEMGSKLNFST 1401



 Score = 98.2 bits (243), Expect(2) = 1e-58
 Identities = 44/77 (57%), Positives = 56/77 (72%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG +ER  Q LE +LR CALDFG  W  NL  AEF+YNN+Y  ++ MAP+EA  GR
Sbjct: 1404 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1463

Query: 113  RCKTPLYWDEFGVRSYW 63
            +C+TPL WD+ G R ++
Sbjct: 1464 KCRTPLLWDQTGERQFF 1480


>gb|ADB85337.1| putative retrotransposon protein [Phyllostachys edulis]
          Length = 1053

 Score =  157 bits (397), Expect(2) = 1e-58
 Identities = 74/135 (54%), Positives = 97/135 (71%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW+ MKREIAE+VA C  CQRVKAE+Q+ A LLQPLP+PEWKW+ + +D +T   RT+  
Sbjct: 658  WWVSMKREIAEFVAHCDICQRVKAEHQRPAGLLQPLPIPEWKWEEIGMDFITGLPRTQTG 717

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D+IWVI+D+L KVAHFI +   Y   KLA +Y+ +IV LHGV   I+ DR   FTSRFW
Sbjct: 718  CDSIWVIIDRLTKVAHFIPVKTTYQSSKLAELYVAKIVCLHGVPKKIVSDRGSQFTSRFW 777

Query: 345  RKFQSAM*TKLSYST 301
            +    A+ T+L++ST
Sbjct: 778  KSLHEALGTRLNFST 792



 Score = 96.7 bits (239), Expect(2) = 1e-58
 Identities = 43/77 (55%), Positives = 55/77 (71%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG +ER  Q LE +LR CALD+G  W  NL  AEF+YNN+Y  ++ M+PFEA  GR
Sbjct: 795  HPQTDGQTERVNQVLEDMLRACALDYGKSWDKNLPFAEFSYNNSYQASLQMSPFEALYGR 854

Query: 113  RCKTPLYWDEFGVRSYW 63
            +C+TPL WDE G   ++
Sbjct: 855  KCRTPLLWDEVGEHQFF 871


>gb|AAT81665.1| putative retrotransposon protein [Oryza sativa Japonica Group]
            gi|108709836|gb|ABF97631.1| retrotransposon protein,
            putative, Ty3-gypsy subclass [Oryza sativa Japonica
            Group]
          Length = 2784

 Score =  156 bits (394), Expect(2) = 2e-58
 Identities = 76/135 (56%), Positives = 93/135 (68%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW  MKREIAEYVA C  CQRVKAE+QK A LLQPL +PEWKW+ + +D +T   RT   
Sbjct: 2058 WWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSG 2117

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D+IWVIVD+L KVAHFI +   Y   +LA +Y+  IV LHGV   I+ DR   FTS FW
Sbjct: 2118 HDSIWVIVDRLTKVAHFIPVKTTYSESRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFW 2177

Query: 345  RKFQSAM*TKLSYST 301
            +K Q  M +KL++ST
Sbjct: 2178 KKLQEEMGSKLNFST 2192



 Score = 96.7 bits (239), Expect(2) = 2e-58
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG +ER  Q LE +LR CALDFG  W  NL  AEF+YNN+Y  ++ MAP+EA  GR
Sbjct: 2195 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 2254

Query: 113  RCKTPLYWDEFGVR 72
            +C+TPL WD+ G R
Sbjct: 2255 KCRTPLLWDQTGER 2268


>gb|AAT81698.1| putative retrotransposon protein, 5'-partial [Oryza sativa Japonica
            Group]
          Length = 1633

 Score =  156 bits (394), Expect(2) = 2e-58
 Identities = 76/135 (56%), Positives = 93/135 (68%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW  MKREIAEYVA C  CQRVKAE+QK A LLQPL +PEWKW+ + +D +T   RT   
Sbjct: 907  WWASMKREIAEYVAVCDVCQRVKAEHQKPAGLLQPLKIPEWKWEEIGMDFITGLPRTSSG 966

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D+IWVIVD+L KVAHFI +   Y   +LA +Y+  IV LHGV   I+ DR   FTS FW
Sbjct: 967  HDSIWVIVDRLTKVAHFIPVKTTYSESRLAELYMARIVCLHGVPKKIVSDRGSQFTSNFW 1026

Query: 345  RKFQSAM*TKLSYST 301
            +K Q  M +KL++ST
Sbjct: 1027 KKLQEEMGSKLNFST 1041



 Score = 96.7 bits (239), Expect(2) = 2e-58
 Identities = 44/74 (59%), Positives = 54/74 (72%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG +ER  Q LE +LR CALDFG  W  NL  AEF+YNN+Y  ++ MAP+EA  GR
Sbjct: 1044 HPQTDGQTERVNQILEDMLRACALDFGGSWDKNLPYAEFSYNNSYQASLQMAPYEALYGR 1103

Query: 113  RCKTPLYWDEFGVR 72
            +C+TPL WD+ G R
Sbjct: 1104 KCRTPLLWDQTGER 1117


>dbj|BAL46523.1| hypothetical protein [Gentiana scabra x Gentiana triflora]
          Length = 1152

 Score =  141 bits (356), Expect(2) = 2e-58
 Identities = 68/135 (50%), Positives = 87/135 (64%)
 Frame = -3

Query: 705  WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
            WW+GMK  IAE+VA C TCQRVKAE+++   LL+PL VPEWKW+ + +D +T   RTK  
Sbjct: 747  WWLGMKLNIAEFVAKCDTCQRVKAEHRRPGGLLKPLEVPEWKWENITMDFITGLPRTKSG 806

Query: 525  KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
             D IWVIVD+L K AHF+   +  P+ K   +Y++ IV LHGV   I+ DR   F S FW
Sbjct: 807  HDMIWVIVDRLTKSAHFLPCKVDMPIKKFTQLYLDNIVRLHGVPLSIVSDRDSRFISHFW 866

Query: 345  RKFQSAM*TKLSYST 301
            +  Q A  TK   ST
Sbjct: 867  KGLQKAFETKTDLST 881



 Score =  111 bits (277), Expect(2) = 2e-58
 Identities = 50/76 (65%), Positives = 59/76 (77%)
 Frame = -1

Query: 293  HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
            HPQTDG SERTIQTLE +LR C L+ G  W D L+ AEFAYNN+YH ++GM PFEA  GR
Sbjct: 884  HPQTDGQSERTIQTLEDMLRACVLEVGGSWDDFLSVAEFAYNNSYHASLGMPPFEALYGR 943

Query: 113  RCKTPLYWDEFGVRSY 66
            +C+TPLYWDE G + Y
Sbjct: 944  KCRTPLYWDEVGEKQY 959


>gb|EMJ22433.1| hypothetical protein PRUPE_ppb019121mg [Prunus persica]
          Length = 552

 Score =  150 bits (380), Expect(2) = 2e-58
 Identities = 73/135 (54%), Positives = 92/135 (68%)
 Frame = -3

Query: 705 WWIGMKREIAEYVAACFTCQRVKAEYQKSA*LLQPLPVPEWKWDYVRIDSVT*FSRTKGY 526
           WW  MK+EIAEYV  C  CQ+VKAE QK + LLQPLP+PEWKW+ + +D V    RT+  
Sbjct: 160 WWPFMKKEIAEYVRRCLICQQVKAERQKPSGLLQPLPIPEWKWERITMDFVFKLPRTQSK 219

Query: 525 KDAIWVIVDQLMKVAHFIAINMIYPLDKLAHVYIEEIV*LHGVLFDILLDRVLMFTSRFW 346
            D +WVIVD+L K AHF+ +   Y L+KLA ++I+EIV LHGV   I+ DR   FTSRFW
Sbjct: 220 HDGVWVIVDRLTKSAHFLPVRANYSLNKLAKIFIDEIVRLHGVPVSIVSDRDPRFTSRFW 279

Query: 345 RKFQSAM*TKLSYST 301
            K   A  T+L +ST
Sbjct: 280 TKLNEAFGTQLQFST 294



 Score =  102 bits (253), Expect(2) = 2e-58
 Identities = 46/72 (63%), Positives = 55/72 (76%)
 Frame = -1

Query: 293 HPQTDG*SERTIQTLEVILRPCALDFGNKWFDNLARAEFAYNNNYHLTIGMAPFEAS*GR 114
           HPQTDG SERTIQTLE +LR CAL F   W + L   EFAYNN+Y ++IGM+PF+A  GR
Sbjct: 297 HPQTDGQSERTIQTLEDMLRACALQFRGDWDEKLPLMEFAYNNSYQVSIGMSPFDALYGR 356

Query: 113 RCKTPLYWDEFG 78
           +C+TP YWDE G
Sbjct: 357 QCRTPFYWDEVG 368