BLASTX nr result
ID: Catharanthus23_contig00025299
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025299
(442 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006446262.1| hypothetical protein CICLE_v10017571mg [Citr... 90 8e-25
ref|XP_006470743.1| PREDICTED: multiple RNA-binding domain-conta... 88 2e-24
ref|XP_006470744.1| PREDICTED: multiple RNA-binding domain-conta... 88 2e-24
ref|XP_006470745.1| PREDICTED: multiple RNA-binding domain-conta... 88 2e-24
gb|EMJ12551.1| hypothetical protein PRUPE_ppa001609mg [Prunus pe... 86 6e-24
ref|XP_006653757.1| PREDICTED: probable RNA-binding protein 19-l... 86 3e-21
ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-l... 86 2e-20
ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [S... 84 6e-20
gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indi... 83 1e-19
emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group] g... 83 1e-19
gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japo... 83 1e-19
ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group] g... 83 1e-19
ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-conta... 75 3e-19
ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA... 75 3e-19
ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea ma... 84 1e-18
gb|EMT15961.1| Multiple RNA-binding domain-containing protein 1 ... 86 1e-18
gb|EMS55781.1| Multiple RNA-binding domain-containing protein 1 ... 86 2e-18
ref|XP_006363169.1| PREDICTED: multiple RNA-binding domain-conta... 91 1e-16
gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA bindi... 90 3e-16
ref|XP_006593822.1| PREDICTED: multiple RNA-binding domain-conta... 86 4e-16
>ref|XP_006446262.1| hypothetical protein CICLE_v10017571mg [Citrus clementina]
gi|557548873|gb|ESR59502.1| hypothetical protein
CICLE_v10017571mg [Citrus clementina]
Length = 706
Score = 89.7 bits (221), Expect(3) = 8e-25
Identities = 53/96 (55%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+K GK+ SM FGF DSV+T NVCRDLQGTILD + + + K
Sbjct: 515 KKHLKNGKN--VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 572
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 573 AEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 605
Score = 48.1 bits (113), Expect(3) = 8e-25
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Frame = +3
Query: 27 VKSTSDSSKN------IVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
V S S +SK +VGE DAKR +LEQQ+EG+T+ D+DPDRV+ + + + F
Sbjct: 433 VLSQSSTSKGNQKNDAVVGEH-DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 489
Score = 21.6 bits (44), Expect(3) = 8e-25
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAP ++LSQ
Sbjct: 427 EWAPSDVLSQ 436
>ref|XP_006470743.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X1 [Citrus sinensis]
Length = 845
Score = 88.2 bits (217), Expect(3) = 2e-24
Identities = 52/96 (54%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+K GK+ SM FGF DSV+T NVCRDLQGTILD + + + K
Sbjct: 654 KKHLKNGKN--VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 711
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEA+EKD+ LFSPFGQ
Sbjct: 712 AEKDKSSTKLLVRNVAFEASEKDL---RQLFSPFGQ 744
Score = 48.1 bits (113), Expect(3) = 2e-24
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Frame = +3
Query: 27 VKSTSDSSKN------IVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
V S S +SK +VGE DAKR +LEQQ+EG+T+ D+DPDRV+ + + + F
Sbjct: 572 VLSQSSTSKGNQKNDAVVGEH-DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 628
Score = 21.6 bits (44), Expect(3) = 2e-24
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAP ++LSQ
Sbjct: 566 EWAPSDVLSQ 575
>ref|XP_006470744.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X2 [Citrus sinensis]
Length = 843
Score = 88.2 bits (217), Expect(3) = 2e-24
Identities = 52/96 (54%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+K GK+ SM FGF DSV+T NVCRDLQGTILD + + + K
Sbjct: 652 KKHLKNGKN--VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 709
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEA+EKD+ LFSPFGQ
Sbjct: 710 AEKDKSSTKLLVRNVAFEASEKDL---RQLFSPFGQ 742
Score = 48.1 bits (113), Expect(3) = 2e-24
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Frame = +3
Query: 27 VKSTSDSSKN------IVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
V S S +SK +VGE DAKR +LEQQ+EG+T+ D+DPDRV+ + + + F
Sbjct: 570 VLSQSSTSKGNQKNDAVVGEH-DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 626
Score = 21.6 bits (44), Expect(3) = 2e-24
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAP ++LSQ
Sbjct: 564 EWAPSDVLSQ 573
>ref|XP_006470745.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X3 [Citrus sinensis]
Length = 759
Score = 88.2 bits (217), Expect(3) = 2e-24
Identities = 52/96 (54%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+K GK+ SM FGF DSV+T NVCRDLQGTILD + + + K
Sbjct: 568 KKHLKNGKN--VSMGFGFIEFDSVETATNVCRDLQGTILDGHALILQLCHAKKDEQVVKK 625
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEA+EKD+ LFSPFGQ
Sbjct: 626 AEKDKSSTKLLVRNVAFEASEKDL---RQLFSPFGQ 658
Score = 48.1 bits (113), Expect(3) = 2e-24
Identities = 26/58 (44%), Positives = 37/58 (63%), Gaps = 6/58 (10%)
Frame = +3
Query: 27 VKSTSDSSKN------IVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
V S S +SK +VGE DAKR +LEQQ+EG+T+ D+DPDRV+ + + + F
Sbjct: 486 VLSQSSTSKGNQKNDAVVGEH-DAKRALLEQQLEGVTDADIDPDRVESRSLFVKNLNF 542
Score = 21.6 bits (44), Expect(3) = 2e-24
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAP ++LSQ
Sbjct: 480 EWAPSDVLSQ 489
>gb|EMJ12551.1| hypothetical protein PRUPE_ppa001609mg [Prunus persica]
Length = 793
Score = 85.5 bits (210), Expect(3) = 6e-24
Identities = 52/97 (53%), Positives = 64/97 (65%), Gaps = 1/97 (1%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMP-C*ER*EQVSI*K 330
KKH+K GK+ SM FGF DS++T N CRDLQGT+LD + C + ++V K
Sbjct: 609 KKHLKNGKN--VSMGFGFIEFDSLETATNACRDLQGTVLDGHSLILQLCHAKKDEVP--K 664
Query: 331 G*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
D D SSTKL+V+NVAFEATEKD+ LFSPFGQ
Sbjct: 665 KVDKDKSSTKLLVKNVAFEATEKDL---RQLFSPFGQ 698
Score = 45.1 bits (105), Expect(3) = 6e-24
Identities = 22/47 (46%), Positives = 32/47 (68%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
+++ +VGE D K+VMLEQ VEGI++ D DPDRV+ + Y + F
Sbjct: 538 ENNSAVVGEH-DVKKVMLEQYVEGISDVDADPDRVESRSLYVKNLSF 583
Score = 25.8 bits (55), Expect(3) = 6e-24
Identities = 9/10 (90%), Positives = 10/10 (100%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAPGN+LSQ
Sbjct: 521 EWAPGNVLSQ 530
>ref|XP_006653757.1| PREDICTED: probable RNA-binding protein 19-like [Oryza brachyantha]
Length = 928
Score = 86.3 bits (212), Expect(2) = 3e-21
Identities = 52/96 (54%), Positives = 61/96 (63%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKHIK GK+ SM FGF DSV+T NVC+DLQGT+LD + + K
Sbjct: 740 KKHIKNGKN--VSMGFGFVEFDSVETATNVCKDLQGTVLDGHALILQLCHGRKDGQAKKK 797
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 798 SEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 830
Score = 40.8 bits (94), Expect(2) = 3e-21
Identities = 19/47 (40%), Positives = 30/47 (63%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
D KN+VGER K ++ EQ VEG++ ++DPDRV+ + + + F
Sbjct: 669 DDEKNVVGERIVTKAIV-EQTVEGVSAEEIDPDRVESRSVFVKNLNF 714
>ref|XP_003581646.1| PREDICTED: probable RNA-binding protein 19-like [Brachypodium
distachyon]
Length = 894
Score = 85.9 bits (211), Expect(3) = 2e-20
Identities = 51/96 (53%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKHIKKGK+ SM FGF DS++T +VC+DLQGT+LD + + K
Sbjct: 706 KKHIKKGKN--VSMGFGFVEFDSIETATSVCKDLQGTLLDGHALILQLCHGKKDSKTAKK 763
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 764 NEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 796
Score = 35.4 bits (80), Expect(3) = 2e-20
Identities = 16/47 (34%), Positives = 29/47 (61%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
+ N++GER AK ++ +Q VEG+ ++DPDRV+ + + + F
Sbjct: 635 EEETNVIGERIVAKAIV-DQTVEGVGAEEIDPDRVESRSLFVKNLNF 680
Score = 23.1 bits (48), Expect(3) = 2e-20
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +2
Query: 2 EWAPGNILSQKHIRFKQK 55
EWAP NILS I +++
Sbjct: 619 EWAPDNILSPTSIHVEEE 636
>ref|XP_002448509.1| hypothetical protein SORBIDRAFT_06g028190 [Sorghum bicolor]
gi|241939692|gb|EES12837.1| hypothetical protein
SORBIDRAFT_06g028190 [Sorghum bicolor]
Length = 620
Score = 84.3 bits (207), Expect(3) = 6e-20
Identities = 51/96 (53%), Positives = 60/96 (62%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+KKGK+ SM FGF DSV+T VC+DLQGT+LD + + K
Sbjct: 432 KKHVKKGKT--VSMGFGFVEFDSVETATGVCKDLQGTVLDGHALILQLCHGKKDGQAAKK 489
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 490 NGKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 522
Score = 37.4 bits (85), Expect(3) = 6e-20
Identities = 19/47 (40%), Positives = 28/47 (59%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
+ KN VGER K +EQ VEG++ D+DPDRV+ + + + F
Sbjct: 361 EEEKNEVGERIVTK-ANIEQTVEGVSAEDIDPDRVESRSVFVKNLNF 406
Score = 21.2 bits (43), Expect(3) = 6e-20
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 345 EWAPENILS 353
>gb|EAY95508.1| hypothetical protein OsI_17353 [Oryza sativa Indica Group]
Length = 904
Score = 82.8 bits (203), Expect(3) = 1e-19
Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILD-DIFATMPC*ER*EQVSI*K 330
KKHIK GK+ SM FGF DSV+T +VC+DLQGT+LD C R + + K
Sbjct: 717 KKHIKNGKN--VSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT--K 772
Query: 331 G*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 773 KNEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 806
Score = 37.7 bits (86), Expect(3) = 1e-19
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
D K++VG+R K ++ EQ VEG++ ++DPDRV+ + + + F
Sbjct: 646 DDEKDVVGDRIVTKAIV-EQTVEGVSAEEIDPDRVESRSVFVKNLNF 691
Score = 21.2 bits (43), Expect(3) = 1e-19
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 630 EWAPENILS 638
>emb|CAE03574.2| OSJNBa0085I10.19 [Oryza sativa Japonica Group]
gi|38568013|emb|CAE05198.3| OSJNBa0070C17.5 [Oryza
sativa Japonica Group]
Length = 904
Score = 82.8 bits (203), Expect(3) = 1e-19
Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILD-DIFATMPC*ER*EQVSI*K 330
KKHIK GK+ SM FGF DSV+T +VC+DLQGT+LD C R + + K
Sbjct: 717 KKHIKNGKN--VSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT--K 772
Query: 331 G*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 773 KNEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 806
Score = 37.7 bits (86), Expect(3) = 1e-19
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
D K++VG+R K ++ EQ VEG++ ++DPDRV+ + + + F
Sbjct: 646 DDEKDVVGDRIVTKAIV-EQTVEGVSAEEIDPDRVESRSVFVKNLNF 691
Score = 21.2 bits (43), Expect(3) = 1e-19
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 630 EWAPENILS 638
>gb|EAZ31951.1| hypothetical protein OsJ_16124 [Oryza sativa Japonica Group]
Length = 867
Score = 82.8 bits (203), Expect(3) = 1e-19
Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILD-DIFATMPC*ER*EQVSI*K 330
KKHIK GK+ SM FGF DSV+T +VC+DLQGT+LD C R + + K
Sbjct: 680 KKHIKNGKN--VSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT--K 735
Query: 331 G*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 736 KNEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 769
Score = 37.7 bits (86), Expect(3) = 1e-19
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
D K++VG+R K ++ EQ VEG++ ++DPDRV+ + + + F
Sbjct: 609 DDEKDVVGDRIVTKAIV-EQTVEGVSAEEIDPDRVESRSVFVKNLNF 654
Score = 21.2 bits (43), Expect(3) = 1e-19
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 593 EWAPENILS 601
>ref|NP_001053839.1| Os04g0611500 [Oryza sativa Japonica Group]
gi|113565410|dbj|BAF15753.1| Os04g0611500, partial
[Oryza sativa Japonica Group]
Length = 536
Score = 82.8 bits (203), Expect(3) = 1e-19
Identities = 53/97 (54%), Positives = 63/97 (64%), Gaps = 1/97 (1%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILD-DIFATMPC*ER*EQVSI*K 330
KKHIK GK+ SM FGF DSV+T +VC+DLQGT+LD C R + + K
Sbjct: 349 KKHIKNGKN--VSMGFGFVEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQT--K 404
Query: 331 G*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 405 KNEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 438
Score = 37.7 bits (86), Expect(3) = 1e-19
Identities = 17/47 (36%), Positives = 30/47 (63%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
D K++VG+R K ++ EQ VEG++ ++DPDRV+ + + + F
Sbjct: 278 DDEKDVVGDRIVTKAIV-EQTVEGVSAEEIDPDRVESRSVFVKNLNF 323
Score = 21.2 bits (43), Expect(3) = 1e-19
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 262 EWAPENILS 270
>ref|XP_004162358.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Cucumis sativus]
Length = 826
Score = 74.7 bits (182), Expect(3) = 3e-19
Identities = 46/96 (47%), Positives = 60/96 (62%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+KKG+ SM FGF DSV+T+ +VC +LQGT+LD + + +
Sbjct: 641 KKHVKKGQH--VSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQGKRK 698
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
D + SSTKL+VRNVAFEAT KD+ LFSP+GQ
Sbjct: 699 VDKEQSSTKLLVRNVAFEATGKDL---RQLFSPYGQ 731
Score = 40.4 bits (93), Expect(3) = 3e-19
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 60 VGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
VGE D +RVMLEQ VEGI + D+DPDRV+ + + + F
Sbjct: 576 VGEG-DTRRVMLEQAVEGIPDVDLDPDRVESRSLFVKNLNF 615
Score = 25.4 bits (54), Expect(3) = 3e-19
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 2 EWAPGNILSQK 34
EWAP NILSQK
Sbjct: 555 EWAPDNILSQK 565
>ref|XP_004149761.1| PREDICTED: LOW QUALITY PROTEIN: multiple RNA-binding
domain-containing protein 1-like [Cucumis sativus]
Length = 823
Score = 74.7 bits (182), Expect(3) = 3e-19
Identities = 46/96 (47%), Positives = 60/96 (62%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+KKG+ SM FGF DSV+T+ +VC +LQGT+LD + + +
Sbjct: 638 KKHVKKGQH--VSMGFGFLEFDSVETSTSVCSNLQGTVLDGHALILQMCNVKKDDQGKRK 695
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
D + SSTKL+VRNVAFEAT KD+ LFSP+GQ
Sbjct: 696 VDKEQSSTKLLVRNVAFEATGKDL---RQLFSPYGQ 728
Score = 40.4 bits (93), Expect(3) = 3e-19
Identities = 21/41 (51%), Positives = 28/41 (68%)
Frame = +3
Query: 60 VGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
VGE D +RVMLEQ VEGI + D+DPDRV+ + + + F
Sbjct: 573 VGEG-DTRRVMLEQAVEGIPDVDLDPDRVESRSLFVKNLNF 612
Score = 25.4 bits (54), Expect(3) = 3e-19
Identities = 10/11 (90%), Positives = 10/11 (90%)
Frame = +2
Query: 2 EWAPGNILSQK 34
EWAP NILSQK
Sbjct: 552 EWAPDNILSQK 562
>ref|NP_001146285.1| uncharacterized protein LOC100279860 [Zea mays]
gi|219886507|gb|ACL53628.1| unknown [Zea mays]
gi|413919482|gb|AFW59414.1| hypothetical protein
ZEAMMB73_904714 [Zea mays]
Length = 881
Score = 84.0 bits (206), Expect(3) = 1e-18
Identities = 51/96 (53%), Positives = 60/96 (62%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKH+KKGK+ SM FGF DSV+T VC+DLQGT+LD + + K
Sbjct: 693 KKHVKKGKN--VSMGFGFVEFDSVETATGVCKDLQGTVLDGHALILQLCHVKKDGQAAKK 750
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 751 NGKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 783
Score = 33.5 bits (75), Expect(3) = 1e-18
Identities = 17/44 (38%), Positives = 27/44 (61%)
Frame = +3
Query: 51 KNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
KN VGER K ++Q VEG++ ++DPDRV+ + + + F
Sbjct: 625 KNEVGERILTK-ANIDQTVEGVSAEEIDPDRVESRSVFVKNLNF 667
Score = 21.2 bits (43), Expect(3) = 1e-18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 606 EWAPENILS 614
>gb|EMT15961.1| Multiple RNA-binding domain-containing protein 1 [Aegilops tauschii]
Length = 979
Score = 85.9 bits (211), Expect(3) = 1e-18
Identities = 52/96 (54%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKHIKKGK+ SM FGF DSV+T +VC+DLQGT+LD + + K
Sbjct: 791 KKHIKKGKN--VSMGFGFAEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQTAKK 848
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 849 NEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 881
Score = 30.8 bits (68), Expect(3) = 1e-18
Identities = 14/50 (28%), Positives = 27/50 (54%)
Frame = +3
Query: 33 STSDSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
+ + N GER K ++ +Q EG++ ++DPDRV+ + + + F
Sbjct: 717 TVEEDETNTAGERIITKAIV-DQTKEGVSAEEIDPDRVESRSVFVKNLNF 765
Score = 21.6 bits (44), Expect(3) = 1e-18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 704 EWAPDNILS 712
>gb|EMS55781.1| Multiple RNA-binding domain-containing protein 1 [Triticum urartu]
Length = 1007
Score = 85.9 bits (211), Expect(3) = 2e-18
Identities = 52/96 (54%), Positives = 62/96 (64%)
Frame = +1
Query: 154 KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILDDIFATMPC*ER*EQVSI*KG 333
KKHIKKGK+ SM FGF DSV+T +VC+DLQGT+LD + + K
Sbjct: 819 KKHIKKGKN--VSMGFGFAEFDSVETATSVCKDLQGTVLDGHALILQLCHGRKDGQTAKK 876
Query: 334 *DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 877 NEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 909
Score = 30.4 bits (67), Expect(3) = 2e-18
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +3
Query: 42 DSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
+ N GER K ++ +Q EG++ ++DPDRV+ + + + F
Sbjct: 748 EDETNTAGERIITKAIV-DQTKEGVSAEEIDPDRVESRSVFVKNLNF 793
Score = 21.6 bits (44), Expect(3) = 2e-18
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = +2
Query: 2 EWAPGNILS 28
EWAP NILS
Sbjct: 732 EWAPDNILS 740
>ref|XP_006363169.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
[Solanum tuberosum]
Length = 838
Score = 91.3 bits (225), Expect = 1e-16
Identities = 56/103 (54%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +1
Query: 136 LTELR*KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILD-DIFATMPC*ER*E 312
+ +R KKH+K GK+ SM FGF DSVDT INVC+DLQGT+LD C + +
Sbjct: 643 ILSVRVKKHVKNGKN--VSMGFGFVEFDSVDTAINVCKDLQGTVLDGHALILQLCHTKKD 700
Query: 313 QVSI*KG*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
Q+ K + D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 701 QLP--KRAENDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 738
Score = 55.8 bits (133), Expect(2) = 2e-07
Identities = 27/53 (50%), Positives = 36/53 (67%)
Frame = +3
Query: 24 LVKSTSDSSKNIVGERRDAKRVMLEQQVEGITEGDVDPDRVKVKETYKEGEEF 182
++ TSDS +V DAKRV+LEQQVEG+T+ DVDPDRV+ + Y + F
Sbjct: 571 ILDQTSDSKNALVVGEDDAKRVLLEQQVEGVTDPDVDPDRVESRSLYVKNLNF 623
Score = 24.6 bits (52), Expect(2) = 2e-07
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAPGNIL Q
Sbjct: 565 EWAPGNILDQ 574
>gb|EOY27481.1| Nucleotide binding,nucleic acid binding,RNA binding [Theobroma cacao]
Length = 971
Score = 90.1 bits (222), Expect = 3e-16
Identities = 55/103 (53%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Frame = +1
Query: 136 LTELR*KKHIKKGKSSVFSMDFGFFVLDSVDTTINVCRDLQGTILD-DIFATMPC*ER*E 312
+ +R KKH+K GK S+ +GF LDSV+T NVCRDLQGTILD C + E
Sbjct: 774 IQSVRIKKHLKNGKQ--VSLGYGFIELDSVETATNVCRDLQGTILDGHALILQLCHAKKE 831
Query: 313 QVSI*KG*DYDTSSTKLIVRNVAFEATEKDIILPN*LFSPFGQ 441
+ ++ K + D SSTKL+VRNVAFEATEKD+ LFSPFGQ
Sbjct: 832 EQAV-KNVEKDKSSTKLLVRNVAFEATEKDL---RQLFSPFGQ 870
>ref|XP_006593822.1| PREDICTED: multiple RNA-binding domain-containing protein 1-like
isoform X1 [Glycine max]
Length = 851
Score = 86.3 bits (212), Expect(2) = 4e-16
Identities = 62/137 (45%), Positives = 84/137 (61%), Gaps = 3/137 (2%)
Frame = +1
Query: 40 QIQAKILLVNVVMQKGLC*SSK--LKE*QREMSILTELR*KKHIKKGKSSVFSMDFGFFV 213
++QA+ L V + K + S + L E +E SIL+ ++ KKH+K GK+ SM FGF
Sbjct: 621 RVQARSLFVKNLNFKTIDESLRKHLTEHMKEGSILS-VKVKKHLKNGKN--VSMGFGFVE 677
Query: 214 LDSVDTTINVCRDLQGTILDD-IFATMPC*ER*EQVSI*KG*DYDTSSTKLIVRNVAFEA 390
DS +T NVC+DLQGT+LD PC + + K + D SSTKL+++NVAFEA
Sbjct: 678 FDSPETATNVCKDLQGTVLDSHALILQPCNVKNDGQKQ-KTLEKDRSSTKLLIKNVAFEA 736
Query: 391 TEKDIILPN*LFSPFGQ 441
TEKD+ LFSPFGQ
Sbjct: 737 TEKDL---RRLFSPFGQ 750
Score = 23.9 bits (50), Expect(2) = 4e-16
Identities = 9/10 (90%), Positives = 9/10 (90%)
Frame = +2
Query: 2 EWAPGNILSQ 31
EWAP NILSQ
Sbjct: 573 EWAPSNILSQ 582