BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025297
         (1287 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]   405   e-157
gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subc...   308   e-116
gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]     306   e-115
gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]     306   e-115
emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]         305   e-115
gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group...   304   e-115
gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]     305   e-115
gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]     305   e-115
gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza s...   304   e-114
gb|ABF98943.1| retrotransposon protein, putative, unclassified, ...   304   e-114
gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subc...   304   e-114
gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-...   304   e-114
gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subc...   304   e-114
gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subc...   304   e-114
gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group...   304   e-114
emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]         304   e-114
gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Jap...   304   e-114
gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japoni...   304   e-114
gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Ja...   304   e-114
gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subc...   306   e-114

>emb|CAN66637.1| hypothetical protein VITISV_011340 [Vitis vinifera]
          Length = 1316

 Score =  405 bits (1041), Expect(3) = e-157
 Identities = 196/289 (67%), Positives = 231/289 (79%)
 Frame = -2

Query: 1280 IERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYK 1101
            +ER+TEPL+LIHSD+ DLK+VQTRGGNKYFITF+D+ST++CYVYLLKSKDEA+ KF++YK
Sbjct: 521  VERNTEPLDLIHSDICDLKFVQTRGGNKYFITFVDDSTKYCYVYLLKSKDEAIEKFVLYK 580

Query: 1100 NEVENQLGKKIKRLRSDRGEEYEAPIGDFCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
             EVENQL KKIK LRSDRG EYE+P  D C QHGI+HE TAPYSPQSNGVAERKN TL+E
Sbjct: 581  TEVENQLNKKIKVLRSDRGGEYESPFVDICAQHGIIHETTAPYSPQSNGVAERKNRTLKE 640

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            MMNAMLISS LP NMWGEAIL+ NY+LN++P KK +KTPYELW G+KPSY +LR+W  L 
Sbjct: 641  MMNAMLISSSLPQNMWGEAILTANYLLNKVPKKKAEKTPYELWKGRKPSYTYLRMWGCLA 700

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                     +K+G KT+DCIFI YAHNS  YRFLVY+S IPDIHKNT++ESRNA F E+V
Sbjct: 701  KVAVPPPKKVKIGPKTIDCIFIGYAHNSNAYRFLVYESNIPDIHKNTIMESRNASFFEDV 760

Query: 560  FPCKSMSGSSSLKRVNEEVQDPTKVQEVELRRSIQPKIAKIFGDDFETY 414
            FPCKS    SS KR+ E  QD  +  EVE RRS + +  K FG DF T+
Sbjct: 761  FPCKSKEEPSSSKRMLES-QDQNEEVEVEPRRSKRVRTEKSFGPDFLTF 808



 Score =  177 bits (449), Expect(3) = e-157
 Identities = 86/117 (73%), Positives = 99/117 (84%)
 Frame = -1

Query: 414  FVRKKEPLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRK 235
            F+ + EP T+ EAVNS+EG +WKE+IK+E+DSILQNHT ELVDLPP CK L SKWIFKRK
Sbjct: 808  FMLEGEPQTFKEAVNSTEGLMWKEAIKSEIDSILQNHTWELVDLPPGCKPLSSKWIFKRK 867

Query: 234  MKLDGSIDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            MK+DGSIDKYK RLV KGYRQ EGLDYFD YSPVT INSI+M+ AIA+LRNL +  M
Sbjct: 868  MKVDGSIDKYKARLVIKGYRQTEGLDYFDTYSPVTRINSIRMVLAIAALRNLEIHQM 924



 Score = 22.3 bits (46), Expect(3) = e-157
 Identities = 8/10 (80%), Positives = 10/10 (100%)
 Frame = -3

Query: 31  EKIYMEQPEG 2
           ++IYMEQPEG
Sbjct: 927 KEIYMEQPEG 936


>gb|ABA99473.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1287

 Score =  308 bits (790), Expect(3) = e-116
 Identities = 154/302 (50%), Positives = 212/302 (70%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+TFID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 445  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKA 504

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE+T PYSP+SNG+AERKN TL +
Sbjct: 505  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHEMTPPYSPESNGIAERKNRTLTD 564

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 565  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 624

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 625  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDAIFFESF 684

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 685  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 744

Query: 419  TY 414
             Y
Sbjct: 745  VY 746



 Score =  112 bits (279), Expect(3) = e-116
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 752  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 811

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 812  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 862



 Score = 47.4 bits (111), Expect(3) = e-116
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 861 QMDVKTAFLNGELDEEIYMDQPDG 884


>gb|AAT58810.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1320

 Score =  306 bits (783), Expect(3) = e-115
 Identities = 155/302 (51%), Positives = 212/302 (70%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S+IPD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEIPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRVNEEVQDPTK--------VQEVEL----RRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +   +  P +        V E ++    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSLITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-115
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-115
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAT38001.1| Putative polyprotein [Oryza sativa Japonica Group]
          Length = 1297

 Score =  306 bits (783), Expect(3) = e-115
 Identities = 155/302 (51%), Positives = 212/302 (70%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S+IPD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEIPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRVNEEVQDPTK--------VQEVEL----RRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +   +  P +        V E ++    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSLITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-115
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-115
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>emb|CAE04792.1| OSJNBb0018J12.5 [Oryza sativa Japonica Group]
          Length = 1320

 Score =  305 bits (781), Expect(3) = e-115
 Identities = 154/302 (50%), Positives = 211/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+TFID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR+W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRIWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++ D+H  T+IESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVLDMHVGTIIESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-115
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-115
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAT69606.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|53749238|gb|AAU90098.1| putative polyprotein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  304 bits (779), Expect(3) = e-115
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (281), Expect(3) = e-115
 Identities = 51/111 (45%), Positives = 78/111 (70%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S + + WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDANYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-115
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAT44162.1| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  305 bits (781), Expect(3) = e-115
 Identities = 153/302 (50%), Positives = 211/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+TFID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTFIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+A+RKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAKRKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKHKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-115
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-115
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAU44026.2| putative polyprotein [Oryza sativa Japonica Group]
          Length = 1391

 Score =  305 bits (780), Expect(3) = e-115
 Identities = 154/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 573  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 632

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 633  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 692

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNRIP++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 693  LVNAMLDTAGLPKAWWGEALLTSNHVLNRIPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 752

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 753  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 812

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 813  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 872

Query: 419  TY 414
             Y
Sbjct: 873  VY 874



 Score =  112 bits (279), Expect(3) = e-115
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 880  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 939

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 940  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 990



 Score = 47.4 bits (111), Expect(3) = e-115
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73   KMDVKTAFLNGELDEKIYMEQPEG 2
            +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 989  QMDVKTAFLNGELDEEIYMDQPDG 1012


>gb|AAN61480.1| Putative polyprotein from transposon TNT [Oryza sativa Japonica
            Group]
          Length = 1911

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|ABF98943.1| retrotransposon protein, putative, unclassified, expressed [Oryza
            sativa Japonica Group]
          Length = 1460

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|ABA97938.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAX96832.1| retrotransposon protein, putative, Ty1-copia sub-class [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAP54573.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|ABA91445.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1320

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLV 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTNSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAT77367.1| putative polyprotein [Oryza sativa Japonica Group]
            gi|51854387|gb|AAU10767.1| hypothetical protein [Oryza
            sativa Japonica Group]
          Length = 1320

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>emb|CAD40744.2| OSJNBa0072D21.4 [Oryza sativa Japonica Group]
          Length = 1319

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAK84454.1|AC087192_15 putative polyprotein [Oryza sativa Japonica Group]
          Length = 1308

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAR01682.1| putative gag and pol protein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|AAR01716.1| putative Gag and Pol polyprotein [Oryza sativa Japonica Group]
          Length = 1302

 Score =  304 bits (779), Expect(3) = e-114
 Identities = 153/302 (50%), Positives = 210/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 484  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 543

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 544  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 603

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 604  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 663

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A F E+ 
Sbjct: 664  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFFESF 723

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 724  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 783

Query: 419  TY 414
             Y
Sbjct: 784  VY 785



 Score =  112 bits (279), Expect(3) = e-114
 Identities = 51/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  EA  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 791  PKSISEAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 850

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 851  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 901



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 900 QMDVKTAFLNGELDEEIYMDQPDG 923


>gb|ABA98797.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
            Japonica Group]
          Length = 1243

 Score =  306 bits (783), Expect(3) = e-114
 Identities = 154/302 (50%), Positives = 211/302 (69%), Gaps = 14/302 (4%)
 Frame = -2

Query: 1277 ERSTEPLELIHSDV*DLKYVQTRGGNKYFITFIDNSTQFCYVYLLKSKDEALAKFIIYKN 1098
            ER+  PLEL+HSD+ ++  V T+GG +YF+T ID++T+FCYVYLLK+KDEAL  F IYK 
Sbjct: 425  ERNLAPLELLHSDLCEMNGVLTKGGKRYFMTLIDDATRFCYVYLLKTKDEALDYFKIYKA 484

Query: 1097 EVENQLGKKIKRLRSDRGEEYEAPIGD-FCVQHGIVHEVTAPYSPQSNGVAERKNCTLRE 921
            EVENQL +KIKRLRSDRG E+ +   D FC +HGI+HE T PYSP+SNG+AERKN TL +
Sbjct: 485  EVENQLDRKIKRLRSDRGGEFFSNEFDLFCEEHGIIHERTPPYSPESNGIAERKNRTLTD 544

Query: 920  MMNAMLISSGLPSNMWGEAILSNNYILNRIPHKKQDKTPYELWSGKKPSYKHLRVWESLX 741
            ++NAML ++GLP   WGEA+L++N++LNR+P++ +DKTPYE+W G+KPS  +LR W  L 
Sbjct: 545  LVNAMLDTAGLPKAWWGEALLTSNHVLNRVPNRNKDKTPYEIWIGRKPSLSYLRTWGCLA 604

Query: 740  XXXXXXXXVIKMGLKTMDCIFIEYAHNSTGYRFLVYDSKIPDIHKNTVIESRNAYFLENV 561
                      K+G KT+DC+F+ YAH+S  YRFL+  S++PD+H  T++ESR+A FLE+ 
Sbjct: 605  KVNVPITKKRKLGPKTVDCVFLGYAHHSIAYRFLIVKSEVPDMHVGTIMESRDATFLESF 664

Query: 560  FPCK-SMSGSSSLKRV----------NEEVQDPTKVQEVE--LRRSIQPKIAKIFGDDFE 420
            FP K + SGS+    +           E   +    ++V    RRS + + AK FGDDF 
Sbjct: 665  FPMKDTHSGSNQPSEIIPSSITPPEQTEHTHELVSEEDVSEAPRRSKRQRTAKSFGDDFT 724

Query: 419  TY 414
             Y
Sbjct: 725  VY 726



 Score =  110 bits (275), Expect(3) = e-114
 Identities = 50/111 (45%), Positives = 77/111 (69%)
 Frame = -1

Query: 396  PLTYDEAVNSSEGHLWKESIKNEVDSILQNHT*ELVDLPPRCKTLGSKWIFKRKMKLDGS 217
            P +  +A  S +   WKE++++E+DSI+ N T E+ + P  CK +G KW+FK+K++ DG+
Sbjct: 732  PKSISKAYASPDADYWKEAVRSEMDSIIANGTWEVTERPYGCKPVGCKWVFKKKLRPDGT 791

Query: 216  IDKYKTRLVTKGYRQKEGLDYFDIYSPVTGINSIKMIHAIASLRNLNVKWM 64
            I+KYK RLV KGY QKEG D+FD YSPV  + +I+++ ++A+   L V  M
Sbjct: 792  IEKYKARLVAKGYTQKEGEDFFDTYSPVARLTTIRVLLSLAASHGLLVHQM 842



 Score = 47.4 bits (111), Expect(3) = e-114
 Identities = 20/24 (83%), Positives = 24/24 (100%)
 Frame = -3

Query: 73  KMDVKTAFLNGELDEKIYMEQPEG 2
           +MDVKTAFLNGELDE+IYM+QP+G
Sbjct: 841 QMDVKTAFLNGELDEEIYMDQPDG 864