BLASTX nr result
ID: Catharanthus23_contig00025246
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025246
(671 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
dbj|BAE79384.1| unnamed protein product [Ipomoea batatas] 92 1e-19
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas] 92 1e-19
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas] 92 1e-19
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera] 99 1e-18
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga... 94 1e-18
emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera] 91 3e-18
emb|CBI18842.3| unnamed protein product [Vitis vinifera] 92 4e-18
emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera] 84 8e-18
emb|CAN72279.1| hypothetical protein VITISV_043410 [Vitis vinifera] 96 1e-17
ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein A... 82 1e-17
ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein A... 86 1e-17
emb|CAN63109.1| hypothetical protein VITISV_014303 [Vitis vinifera] 89 2e-17
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210... 80 3e-17
ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein A... 84 4e-17
emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera] 94 5e-17
emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera] 87 5e-17
gb|AAC63844.1| putative non-LTR retroelement reverse transcripta... 82 7e-17
emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera] 87 7e-17
emb|CAN78815.1| hypothetical protein VITISV_041732 [Vitis vinifera] 89 7e-17
emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera] 93 8e-17
>dbj|BAE79384.1| unnamed protein product [Ipomoea batatas]
Length = 1898
Score = 91.7 bits (226), Expect(2) = 1e-19
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A + +L+Q++ A +P YTMQ + +P + ++DK +F WGH+ RKLH++ W IC+
Sbjct: 1323 AGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICK 1382
Query: 182 PKEQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKY 292
P+ +GGLG R R+ TK+AW+ + + LW +VL KY
Sbjct: 1383 PRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 1425
Score = 31.2 bits (69), Expect(2) = 1e-19
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTGTGPLFS 428
+ +G G I+FW D W G GPL S
Sbjct: 1460 WNVGNGRKINFWNDWWVGDGPLAS 1483
>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 91.7 bits (226), Expect(2) = 1e-19
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A + +L+Q++ A +P YTMQ + +P + ++DK +F WGH+ RKLH++ W IC+
Sbjct: 791 AGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICK 850
Query: 182 PKEQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKY 292
P+ +GGLG R R+ TK+AW+ + + LW +VL KY
Sbjct: 851 PRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893
Score = 31.2 bits (69), Expect(2) = 1e-19
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTGTGPLFS 428
+ +G G I+FW D W G GPL S
Sbjct: 928 WNVGNGRKINFWNDWWVGDGPLAS 951
>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
Length = 1366
Score = 91.7 bits (226), Expect(2) = 1e-19
Identities = 40/103 (38%), Positives = 64/103 (62%), Gaps = 6/103 (5%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A + +L+Q++ A +P YTMQ + +P + ++DK +F WGH+ RKLH++ W IC+
Sbjct: 791 AGRRVLVQASLATVPTYTMQVMALPVSTCNEIDKTCRNFLWGHDTNTRKLHSVNWAEICK 850
Query: 182 PKEQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKY 292
P+ +GGLG R R+ TK+AW+ + + LW +VL KY
Sbjct: 851 PRNEGGLGLRMARDFNRAFLTKMAWQIFSNIDKLWVKVLREKY 893
Score = 31.2 bits (69), Expect(2) = 1e-19
Identities = 12/24 (50%), Positives = 15/24 (62%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTGTGPLFS 428
+ +G G I+FW D W G GPL S
Sbjct: 928 WNVGNGRKINFWNDWWVGDGPLAS 951
>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
Length = 996
Score = 99.0 bits (245), Expect = 1e-18
Identities = 51/129 (39%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Frame = +2
Query: 8 KAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPK 187
+ ILI+ST A+IP Y M +MP+ + +L+KL DF WG N +RK+H + WK +C K
Sbjct: 641 RLILIKSTMASIPLYQMSLFRMPKLVARRLEKLQRDFLWGGGNLERKVHNVNWKIVCTEK 700
Query: 188 EQGGLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLC 349
E+GGLG R+L A WR+ E LW VL +KYG W KK +
Sbjct: 701 EKGGLGLRKLVPLNKALLGKWIWRFACEKEXLWRHVLVAKYGQEGFGWMT--KKTNGTFG 758
Query: 350 KGLWSRPRK 376
G+W K
Sbjct: 759 VGVWKEIMK 767
>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1378
Score = 94.4 bits (233), Expect(2) = 1e-18
Identities = 40/103 (38%), Positives = 67/103 (65%), Gaps = 6/103 (5%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A +A LIQS ++IP+YTMQ+ K+P + + +D+ + F WG + G+R++H +AW+ I +
Sbjct: 793 AGRATLIQSAFSSIPYYTMQSTKLPRSTCDDIDRKSRSFLWGEQEGKRRVHLVAWENISK 852
Query: 182 PKEQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKY 292
K++GGLG R +R+ K+ WR E + LW+ +L +KY
Sbjct: 853 SKKEGGLGIRSMRQANSAFLVKLGWRLLAEPSSLWSRILRAKY 895
Score = 25.0 bits (53), Expect(2) = 1e-18
Identities = 13/41 (31%), Positives = 17/41 (41%)
Frame = +3
Query: 363 LGQGNLIDFWFDNWTGTGPLFS*AIASVPKEEWGKKVQDYW 485
+G G FW W + PL S A P E V++ W
Sbjct: 933 VGNGAKTLFWHHRWATSEPLISLASPIPPIELQDATVKEMW 973
>emb|CAN77370.1| hypothetical protein VITISV_033119 [Vitis vinifera]
Length = 1190
Score = 91.3 bits (225), Expect(2) = 3e-18
Identities = 44/121 (36%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST +IP Y M +MP++++++L+KL DF WG N RK+H + WK C K++G
Sbjct: 750 LIKSTLVSIPIYQMSIFRMPKSVVKRLEKLQRDFLWGXGNTARKIHLVNWKVXCTQKDKG 809
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLCKGL 358
GLG RR+ A WR+ E + LW +V+ K+G W K+ + G+
Sbjct: 810 GLGIRRMGSLNKALLGKWIWRFAVEKDVLWKKVIGVKHGLEGGGWK--SKEARGLVGVGV 867
Query: 359 W 361
W
Sbjct: 868 W 868
Score = 26.9 bits (58), Expect(2) = 3e-18
Identities = 9/22 (40%), Positives = 14/22 (63%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTGTGPL 422
+ +G+GN + FW D+W G L
Sbjct: 884 FKVGRGNKVMFWTDHWCGNEAL 905
>emb|CBI18842.3| unnamed protein product [Vitis vinifera]
Length = 533
Score = 92.4 bits (228), Expect(2) = 4e-18
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST A++P Y + +MP+ ++++L+KL DF WG + +RK+H + W+ +C KE G
Sbjct: 74 LIKSTLASLPIYQLSFFRMPKLVVKRLEKLQRDFLWGGGSMERKIHLINWEVVCTQKESG 133
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLCKGL 358
GLG R++ A WR+ E NF W +V+ KYG + W K+ G+
Sbjct: 134 GLGIRKIDLLNKALLGKWIWRFAFEENFFWRKVVGVKYGQLGFGWRT--KEARGTFGVGV 191
Query: 359 W 361
W
Sbjct: 192 W 192
Score = 25.4 bits (54), Expect(2) = 4e-18
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTG 410
+ +G+G + FW D+W G
Sbjct: 208 FKVGKGTKVSFWTDHWCG 225
>emb|CAN78577.1| hypothetical protein VITISV_020585 [Vitis vinifera]
Length = 1848
Score = 83.6 bits (205), Expect(2) = 8e-18
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 6/124 (4%)
Frame = +2
Query: 8 KAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPK 187
+A LI+ST + +P Y M +++P ++ +L+++ DF WG + +RK H + WK +C K
Sbjct: 1427 RATLIRSTLSNLPIYYMSVLRLPSSVRSRLEQIQRDFLWGGGSLERKPHLVRWKVVCLSK 1486
Query: 188 EQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLC 349
++GGLG + L +K WR+ E LW +V+ KYG W+ +++ +
Sbjct: 1487 KKGGLGIKCLSNLNKALLSKWNWRYANEREALWNQVIRGKYGEDRGGWSTREVREAHGV- 1545
Query: 350 KGLW 361
GLW
Sbjct: 1546 -GLW 1548
Score = 33.1 bits (74), Expect(2) = 8e-18
Identities = 17/48 (35%), Positives = 22/48 (45%), Gaps = 4/48 (8%)
Frame = +3
Query: 354 AYGLGQGNLIDFWFDNWTGTGPLF----S*AIASVPKEEWGKKVQDYW 485
++ +G G + FW D W G PL S S+ KE W V D W
Sbjct: 1563 SFSVGNGRRVSFWRDRWCGXAPLCDSFPSIYALSIEKEAW---VADVW 1607
>emb|CAN72279.1| hypothetical protein VITISV_043410 [Vitis vinifera]
Length = 1454
Score = 95.9 bits (237), Expect = 1e-17
Identities = 47/126 (37%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST A+IP Y M +MP+ ++ +L+KL DF WG N +RK+H + W+ +C KE+G
Sbjct: 1276 LIKSTLASIPIYQMSLFRMPKIVVRRLEKLQRDFLWGGGNMERKIHLVKWEIVCGDKERG 1335
Query: 197 GLGFRRL------RETKVAWRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLCKGL 358
GLG R+L +K WR+ E LW +V+ +K+G W KK + G+
Sbjct: 1336 GLGLRKLGLLNRALLSKWIWRFACERENLWKQVIVAKFGQEDDGWK--SKKPNGAFGVGV 1393
Query: 359 WSRPRK 376
W K
Sbjct: 1394 WKEVMK 1399
>ref|XP_004253442.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Solanum
lycopersicum]
Length = 775
Score = 82.0 bits (201), Expect(2) = 1e-17
Identities = 42/115 (36%), Positives = 62/115 (53%), Gaps = 10/115 (8%)
Frame = +2
Query: 8 KAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPK 187
KA+L + A+P + + AV P TII+++ L DFFWG +N +K H +WK + P
Sbjct: 180 KAVLSKYVLQALPIHLLSAVTPPNTIIKQIQMLIADFFWGWQNNSKKYHWSSWKNLSYPY 239
Query: 188 EQGGLGFRRLRET------KVAWRWRTESNFLWAEVLTSKY----GSISKHWAVG 322
E+GG+G R L + K W +RT+ LW + L +KY +SK W G
Sbjct: 240 EEGGVGMRNLNDVCKSFQFKQWWTFRTKQT-LWGDFLRAKYCQRSNPVSKKWDTG 293
Score = 34.3 bits (77), Expect(2) = 1e-17
Identities = 19/53 (35%), Positives = 28/53 (52%)
Frame = +3
Query: 327 RSKVHTYVRAYGLGQGNLIDFWFDNWTGTGPLFS*AIASVPKEEWGKKVQDYW 485
R +V +++ + L GN FW+DNW GTGPL ++ KV D+W
Sbjct: 305 RQQVEQHIQ-WQLQAGNC-SFWWDNWMGTGPLAQHTCNNIRLN--NSKVADFW 353
>ref|XP_004306074.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 407
Score = 85.5 bits (210), Expect(2) = 1e-17
Identities = 39/103 (37%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A + LIQS ++AIP Y MQ K P ++ E LDKLN +F WG ++K+H + W +CQ
Sbjct: 50 AGRLTLIQSVSSAIPNYAMQTAKFPVSLCENLDKLNRNFLWGDTEIKKKVHLVNWDVVCQ 109
Query: 182 PKEQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKY 292
PK+ G +G ++ + K++WR LWA + KY
Sbjct: 110 PKQLGDIGIKKTEDMNQAMLAKISWRMFQCDKGLWASMFAEKY 152
Score = 30.4 bits (67), Expect(2) = 1e-17
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +3
Query: 363 LGQGNLIDFWFDNWTGTGPLFS*AIAS 443
LG G I FW D W GPL + A+ S
Sbjct: 191 LGDGKSIKFWHDYWFPAGPLINFALPS 217
>emb|CAN63109.1| hypothetical protein VITISV_014303 [Vitis vinifera]
Length = 704
Score = 89.0 bits (219), Expect(2) = 2e-17
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST A+IP Y M +MP++++++L+KL DF WG + RK+H + WK +C KE+
Sbjct: 366 LIKSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWGGRSXGRKIHLINWKVVCTQKEKX 425
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHW 313
GLG RR+ A WR+ E + LW +V+ K+G W
Sbjct: 426 GLGIRRMGLLNKALLGKWIWRFAVEKDVLWKKVIGVKHGLEGCGW 470
Score = 26.6 bits (57), Expect(2) = 2e-17
Identities = 21/75 (28%), Positives = 31/75 (41%), Gaps = 10/75 (13%)
Frame = +3
Query: 312 GQWEERSKVHTYV---RAYGLGQGNLIDFWFDNWTGTGPL-------FS*AIASVPKEEW 461
G W+E K ++ + +G+G I FW D+W G L F+ A+ S
Sbjct: 482 GVWKEILKEMSWCWNNMKFKVGRGTKIMFWTDHWCGNVALSQAFPQIFALAVCS------ 535
Query: 462 GKKVQDYWCVRRNSG 506
+ V D W R G
Sbjct: 536 NELVNDVWDPRLGQG 550
>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
putative protein [Arabidopsis thaliana]
Length = 947
Score = 79.7 bits (195), Expect(2) = 3e-17
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 13/120 (10%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A + L +S + IP +TM + +P++ +E LDKL F G ++KLH +AW +C
Sbjct: 464 AGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAWDRVCL 523
Query: 182 PKEQGGLGFR------RLRETKVAWRWRTESNFLWAEVLTSKYG-------SISKHWAVG 322
PK +GGLG R + +KV WR + LWA +L SKY S W VG
Sbjct: 524 PKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSKYRVGLREVVSRGSRWVVG 583
Score = 35.0 bits (79), Expect(2) = 3e-17
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +3
Query: 363 LGQGNLIDFWFDNWTGTGPLFS*AIASVPKEEWGKKVQDYW 485
+G G I FW DNW L + A+ +P E +V+D W
Sbjct: 582 VGNGRDILFWSDNWLSHEALINRAVIEIPNSEKELRVKDLW 622
>ref|XP_004253372.1| PREDICTED: putative ribonuclease H protein At1g65750-like, partial
[Solanum lycopersicum]
Length = 451
Score = 83.6 bits (205), Expect(2) = 4e-17
Identities = 43/115 (37%), Positives = 65/115 (56%), Gaps = 10/115 (8%)
Frame = +2
Query: 8 KAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPK 187
KA+L + A+P + + AV P+TII+++ L DFFWG +N +RK H +WK + P
Sbjct: 121 KAVLSKHVLQALPIHLLTAVTPPKTIIKQIQMLIADFFWGWQNNRRKYHWSSWKNLSYPY 180
Query: 188 EQGGLGFRRLRET------KVAWRWRTESNFLWAEVLTSKY----GSISKHWAVG 322
E+GG+G R L + K W +RT+ + LW + L +KY +SK W G
Sbjct: 181 EEGGIGMRNLHDICKSFQFKQWWTFRTK-HTLWGDFLKAKYCQRSNPVSKKWDTG 234
Score = 30.8 bits (68), Expect(2) = 4e-17
Identities = 18/53 (33%), Positives = 26/53 (49%)
Frame = +3
Query: 327 RSKVHTYVRAYGLGQGNLIDFWFDNWTGTGPLFS*AIASVPKEEWGKKVQDYW 485
R + Y++ + L GN FW+DNW GTG L ++ KV D+W
Sbjct: 246 RQQGEQYIQ-WQLNSGNC-SFWWDNWLGTGSLAQHTNRNIRFN--NSKVADFW 294
>emb|CAN71106.1| hypothetical protein VITISV_000041 [Vitis vinifera]
Length = 2009
Score = 93.6 bits (231), Expect = 5e-17
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 6/121 (4%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST A+IP Y M +MP++++++L+KL DF WG N RK+H + WK +C K++G
Sbjct: 1704 LIKSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWGGGNTGRKIHLVNWKVVCTQKDKG 1763
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLCKGL 358
GLG RR+ A WR+ E + LW +V+ KYG W K+ G+
Sbjct: 1764 GLGIRRMGLLNKALLGKWIWRFAVEKDVLWKKVIGVKYGLEGGGWK--SKEARGPFGXGV 1821
Query: 359 W 361
W
Sbjct: 1822 W 1822
>emb|CAN62439.1| hypothetical protein VITISV_044009 [Vitis vinifera]
Length = 1290
Score = 87.4 bits (215), Expect(2) = 5e-17
Identities = 41/105 (39%), Positives = 62/105 (59%), Gaps = 6/105 (5%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST A+IP Y M +MP++++++L+KL DF W + RK+H + WK +C KE+G
Sbjct: 976 LIKSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWEGGSTDRKIHLINWKVVCTQKEKG 1035
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHW 313
GLG RR+ A WR+ E + LW +V+ K+G W
Sbjct: 1036 GLGIRRMGLLNKALLGKWIWRFVVEKDVLWKKVIGVKHGLEGCGW 1080
Score = 26.6 bits (57), Expect(2) = 5e-17
Identities = 13/40 (32%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Frame = +3
Query: 312 GQWEERSKVHTYV---RAYGLGQGNLIDFWFDNWTGTGPL 422
G W+E K ++ + +G+G+ I FW D+W G L
Sbjct: 1092 GVWKEILKEMSWCWNNMKFKVGRGSKIMFWTDHWCGNKAL 1131
>gb|AAC63844.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1231
Score = 81.6 bits (200), Expect(2) = 7e-17
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 6/121 (4%)
Frame = +2
Query: 2 ASKAILIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQ 181
A + L ++ ++IP + M A+ +P + ++ LD+ + F WG ++K H L+W+ IC+
Sbjct: 650 AGRITLTKAVLSSIPVHVMSAILLPVSTLDTLDRYSRTFLWGSTMEKKKQHLLSWRKICK 709
Query: 182 PKEQGGLGFRRLRE------TKVAWRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSY 343
PK +GG+G R R+ KV WR + LWA V+ KY VGG + +S+
Sbjct: 710 PKAEGGIGLRSARDMNKALVAKVGWRLLQDKESLWARVVRKKY-------KVGGVQDTSW 762
Query: 344 L 346
L
Sbjct: 763 L 763
Score = 32.0 bits (71), Expect(2) = 7e-17
Identities = 15/40 (37%), Positives = 17/40 (42%)
Frame = +3
Query: 366 GQGNLIDFWFDNWTGTGPLFS*AIASVPKEEWGKKVQDYW 485
G G I FW D W PL +P+ E K DYW
Sbjct: 793 GDGCTIRFWLDRWLLQEPLVELGTDMIPEGERIKVAADYW 832
>emb|CAN80807.1| hypothetical protein VITISV_023749 [Vitis vinifera]
Length = 1215
Score = 87.4 bits (215), Expect(2) = 7e-17
Identities = 41/121 (33%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ST A++P Y + +M + ++++L+KL DF WG + +RK+H + W+ +C KE G
Sbjct: 864 LIKSTLASMPIYQLSLFRMAKLVVKRLEKLQRDFLWGGGSMERKIHLINWEVVCTQKESG 923
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLCKGL 358
GLG R++ A WR+ E +F W +V+ KYG + W K+ G+
Sbjct: 924 GLGIRKIDLLNKALLGKWIWRFAFEEDFFWRKVVGVKYGQLGFGWKT--KETRGTFRVGV 981
Query: 359 W 361
W
Sbjct: 982 W 982
Score = 26.2 bits (56), Expect(2) = 7e-17
Identities = 7/18 (38%), Positives = 12/18 (66%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTG 410
+ +G+G + FW D+W G
Sbjct: 998 FNVGKGTKVSFWTDHWCG 1015
>emb|CAN78815.1| hypothetical protein VITISV_041732 [Vitis vinifera]
Length = 781
Score = 88.6 bits (218), Expect(2) = 7e-17
Identities = 39/105 (37%), Positives = 63/105 (60%), Gaps = 6/105 (5%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI+ T A++P YTM +MP++++++L+K+ DF WG + +RK+H + W+ +C KE+G
Sbjct: 503 LIKCTMASLPIYTMSLFRMPKSVVKRLEKIQRDFLWGGGSLERKVHLINWEVVCTSKEKG 562
Query: 197 GLGFRRLRET------KVAWRWRTESNFLWAEVLTSKYGSISKHW 313
GLG RR+ K WR+ E + LW ++ KYG W
Sbjct: 563 GLGMRRIDSLNKALLGKWVWRFAVEKDNLWRLMIGVKYGQEEFGW 607
Score = 25.0 bits (53), Expect(2) = 7e-17
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +3
Query: 357 YGLGQGNLIDFWFDNWTG 410
+ +G+G I FW D W G
Sbjct: 637 FKVGKGTRIKFWSDQWCG 654
>emb|CAN82834.1| hypothetical protein VITISV_042298 [Vitis vinifera]
Length = 1416
Score = 92.8 bits (229), Expect = 8e-17
Identities = 46/121 (38%), Positives = 67/121 (55%), Gaps = 6/121 (4%)
Frame = +2
Query: 17 LIQSTTAAIPFYTMQAVKMPETIIEKLDKLNGDFFWGHENGQRKLHTLAWKTICQPKEQG 196
LI ST A+IP Y M +MP++++++L+KL DF WG N RK+H + WK +C K++G
Sbjct: 1176 LIXSTLASIPIYQMSIFRMPKSVVKRLEKLQRDFLWGGGNTGRKIHLVNWKVVCTQKDKG 1235
Query: 197 GLGFRRLRETKVA------WRWRTESNFLWAEVLTSKYGSISKHWAVGGKKQSSYLCKGL 358
GLG RR+ A WR+ E + LW +V+ KYG W K+ G+
Sbjct: 1236 GLGIRRMGLLNKALLGKWIWRFAVEKDVLWKKVIGVKYGLEGGGWK--SKEARGPFGAGV 1293
Query: 359 W 361
W
Sbjct: 1294 W 1294