BLASTX nr result
ID: Catharanthus23_contig00025221
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025221
(301 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252... 84 2e-14
emb|CBI19420.3| unnamed protein product [Vitis vinifera] 84 2e-14
ref|XP_006472283.1| PREDICTED: transcription initiation factor T... 82 6e-14
ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citr... 82 6e-14
ref|XP_006362063.1| PREDICTED: transcription initiation factor T... 81 1e-13
ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262... 81 1e-13
ref|XP_006386481.1| hypothetical protein POPTR_0002s12080g [Popu... 79 5e-13
ref|XP_002302416.1| predicted protein [Populus trichocarpa] 79 5e-13
ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295... 77 2e-12
gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus pe... 76 4e-12
ref|XP_002510115.1| transcription initiation factor, putative [R... 76 4e-12
ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Popu... 75 9e-12
gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, part... 72 6e-11
gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theo... 72 6e-11
gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theo... 72 6e-11
ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206... 72 8e-11
gb|EXB38469.1| Transcription initiation factor TFIID subunit 4B ... 72 1e-10
ref|XP_004512638.1| PREDICTED: serine-rich adhesin for platelets... 72 1e-10
ref|XP_006280020.1| hypothetical protein CARUB_v10025896mg [Caps... 71 1e-10
ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thalian... 71 1e-10
>ref|XP_002283285.2| PREDICTED: uncharacterized protein LOC100252311 [Vitis vinifera]
Length = 922
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/48 (89%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMKLLEEDEDETMHSGADV+A TAALNRDIEGD STS PSDSE+
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSEN 48
>emb|CBI19420.3| unnamed protein product [Vitis vinifera]
Length = 882
Score = 84.0 bits (206), Expect = 2e-14
Identities = 43/48 (89%), Positives = 45/48 (93%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMKLLEEDEDETMHSGADV+A TAALNRDIEGD STS PSDSE+
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEALTAALNRDIEGDTSTSQPSDSEN 48
>ref|XP_006472283.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Citrus sinensis]
Length = 955
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/48 (89%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMKLLEEDEDE+MHSGADVDAF AALNRDI GD STS PSDSES
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSES 48
>ref|XP_006433616.1| hypothetical protein CICLE_v10000177mg [Citrus clementina]
gi|557535738|gb|ESR46856.1| hypothetical protein
CICLE_v10000177mg [Citrus clementina]
Length = 954
Score = 82.4 bits (202), Expect = 6e-14
Identities = 43/48 (89%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMKLLEEDEDE+MHSGADVDAF AALNRDI GD STS PSDSES
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVDAFQAALNRDIGGDVSTSQPSDSES 48
>ref|XP_006362063.1| PREDICTED: transcription initiation factor TFIID subunit 4b-like
[Solanum tuberosum]
Length = 934
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMKLLEEDEDETMHSGADV+AFTAALNRDI GD S S PSDS+S
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNSQSQPSDSDS 48
>ref|XP_004238100.1| PREDICTED: uncharacterized protein LOC101262209 [Solanum
lycopersicum]
Length = 934
Score = 81.3 bits (199), Expect = 1e-13
Identities = 42/48 (87%), Positives = 44/48 (91%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMKLLEEDEDETMHSGADV+AFTAALNRDI GD S S PSDS+S
Sbjct: 1 MDPSIMKLLEEDEDETMHSGADVEAFTAALNRDIGGDNSQSQPSDSDS 48
>ref|XP_006386481.1| hypothetical protein POPTR_0002s12080g [Populus trichocarpa]
gi|550344829|gb|ERP64278.1| hypothetical protein
POPTR_0002s12080g [Populus trichocarpa]
Length = 580
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/48 (85%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDP+IMKLLEEDEDETMHSGADV+AF AALNRDI GD STS PSDS S
Sbjct: 1 MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDVSTSQPSDSSS 48
>ref|XP_002302416.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 79.3 bits (194), Expect = 5e-13
Identities = 41/48 (85%), Positives = 43/48 (89%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDP+IMKLLEEDEDETMHSGADV+AF AALNRDI GD STS PSDS S
Sbjct: 1 MDPNIMKLLEEDEDETMHSGADVEAFQAALNRDIGGDVSTSQPSDSSS 48
>ref|XP_004300119.1| PREDICTED: uncharacterized protein LOC101295421 [Fragaria vesca
subsp. vesca]
Length = 958
Score = 77.4 bits (189), Expect = 2e-12
Identities = 39/49 (79%), Positives = 43/49 (87%), Gaps = 2/49 (4%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD--STSPPSDSES 2
MDPSIMKLLE+DEDETMHSGADV+AF AALNRDIEGD + PSDS+S
Sbjct: 1 MDPSIMKLLEDDEDETMHSGADVEAFQAALNRDIEGDVSALQQPSDSDS 49
>gb|EMJ11585.1| hypothetical protein PRUPE_ppa001063mg [Prunus persica]
Length = 920
Score = 76.3 bits (186), Expect = 4e-12
Identities = 41/49 (83%), Positives = 44/49 (89%), Gaps = 2/49 (4%)
Frame = -1
Query: 142 MDPSIMK-LLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSIMK LLE+DEDETMHSGADV+AF AALNRDIEGD S S PSDS+S
Sbjct: 1 MDPSIMKKLLEDDEDETMHSGADVEAFQAALNRDIEGDVSVSQPSDSDS 49
>ref|XP_002510115.1| transcription initiation factor, putative [Ricinus communis]
gi|223550816|gb|EEF52302.1| transcription initiation
factor, putative [Ricinus communis]
Length = 925
Score = 76.3 bits (186), Expect = 4e-12
Identities = 39/46 (84%), Positives = 42/46 (91%), Gaps = 1/46 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDS 8
MDPSIMKLLEEDEDE+MHSGADV+AF AALNRDI GD STS PSD+
Sbjct: 1 MDPSIMKLLEEDEDESMHSGADVEAFQAALNRDIGGDASTSQPSDT 46
>ref|XP_002320699.1| hypothetical protein POPTR_0014s01830g [Populus trichocarpa]
gi|222861472|gb|EEE99014.1| hypothetical protein
POPTR_0014s01830g [Populus trichocarpa]
Length = 875
Score = 75.1 bits (183), Expect = 9e-12
Identities = 38/48 (79%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDP+IM+LLEEDEDETMHSGADV+AF AALNRDI GD S S PSDS +
Sbjct: 1 MDPNIMRLLEEDEDETMHSGADVEAFQAALNRDIGGDVSNSQPSDSSA 48
>gb|EOY15763.1| TBP-associated factor 4, putative isoform 3, partial [Theobroma
cacao]
Length = 707
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGDSTSPPSDSES 2
MDPSI+KLLEEDEDE+MHSGADV+AF AALNRDIEGD+ + S S
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDAATTSQTSGS 47
>gb|EOY15762.1| TBP-associated factor 4, putative isoform 2 [Theobroma cacao]
Length = 944
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGDSTSPPSDSES 2
MDPSI+KLLEEDEDE+MHSGADV+AF AALNRDIEGD+ + S S
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDAATTSQTSGS 47
>gb|EOY15761.1| TBP-associated factor 4, putative isoform 1 [Theobroma cacao]
Length = 950
Score = 72.4 bits (176), Expect = 6e-11
Identities = 35/47 (74%), Positives = 40/47 (85%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGDSTSPPSDSES 2
MDPSI+KLLEEDEDE+MHSGADV+AF AALNRDIEGD+ + S S
Sbjct: 1 MDPSIVKLLEEDEDESMHSGADVEAFQAALNRDIEGDAATTSQTSGS 47
>ref|XP_004148511.1| PREDICTED: uncharacterized protein LOC101206316 [Cucumis sativus]
gi|449521952|ref|XP_004167993.1| PREDICTED:
uncharacterized LOC101206316 [Cucumis sativus]
Length = 898
Score = 72.0 bits (175), Expect = 8e-11
Identities = 36/47 (76%), Positives = 39/47 (82%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGDSTSPPSDSES 2
MDPSIMKLLE+DEDE+MHSGA VDAF AALNRDIEGD + SES
Sbjct: 1 MDPSIMKLLEDDEDESMHSGAAVDAFQAALNRDIEGDVQAVAQTSES 47
>gb|EXB38469.1| Transcription initiation factor TFIID subunit 4B [Morus notabilis]
Length = 961
Score = 71.6 bits (174), Expect = 1e-10
Identities = 39/50 (78%), Positives = 42/50 (84%), Gaps = 3/50 (6%)
Frame = -1
Query: 142 MDPSIMK-LLEEDEDETMHSGADVDAFTAALNRDIEGD--STSPPSDSES 2
MDPSIMK LLE+DEDE+MHSGADVDAF AALNRDI GD TS P DS+S
Sbjct: 1 MDPSIMKKLLEDDEDESMHSGADVDAFQAALNRDIRGDVPPTSQPYDSDS 50
>ref|XP_004512638.1| PREDICTED: serine-rich adhesin for platelets-like [Cicer arietinum]
Length = 920
Score = 71.6 bits (174), Expect = 1e-10
Identities = 37/48 (77%), Positives = 42/48 (87%), Gaps = 1/48 (2%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGD-STSPPSDSES 2
MDPSI+KLLE+DEDETMHSGADV+AF AALNRDI GD S S SDS++
Sbjct: 1 MDPSIVKLLEDDEDETMHSGADVEAFQAALNRDIGGDASNSQLSDSDA 48
>ref|XP_006280020.1| hypothetical protein CARUB_v10025896mg [Capsella rubella]
gi|482548724|gb|EOA12918.1| hypothetical protein
CARUB_v10025896mg [Capsella rubella]
Length = 818
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGDSTS 23
MDPSI KLLEEDEDE+MHSGADVDAF AALNRDIEG T+
Sbjct: 1 MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMTT 40
>ref|NP_001190458.1| TBP-associated factor 4 [Arabidopsis thaliana]
gi|550540908|sp|F4K4L7.1|TAF4B_ARATH RecName:
Full=Transcription initiation factor TFIID subunit 4b;
AltName: Full=TBP-associated factor 4b; Short=AtTAF4b
gi|332007531|gb|AED94914.1| TBP-associated factor 4
[Arabidopsis thaliana]
Length = 852
Score = 71.2 bits (173), Expect = 1e-10
Identities = 34/40 (85%), Positives = 36/40 (90%)
Frame = -1
Query: 142 MDPSIMKLLEEDEDETMHSGADVDAFTAALNRDIEGDSTS 23
MDPSI KLLEEDEDE+MHSGADVDAF AALNRDIEG T+
Sbjct: 1 MDPSIFKLLEEDEDESMHSGADVDAFQAALNRDIEGSMTT 40