BLASTX nr result

ID: Catharanthus23_contig00025173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025173
         (842 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610451.1| hypothetical protein MTR_4g132310 [Medicago ...    60   1e-06
ref|XP_003593955.1| 60S ribosomal protein L18a [Medicago truncat...    59   3e-06
ref|XP_003608500.1| Cytochrome B561-related protein [Medicago tr...    57   6e-06

>ref|XP_003610451.1| hypothetical protein MTR_4g132310 [Medicago truncatula]
           gi|355511506|gb|AES92648.1| hypothetical protein
           MTR_4g132310 [Medicago truncatula]
          Length = 120

 Score = 60.1 bits (144), Expect = 1e-06
 Identities = 28/31 (90%), Positives = 28/31 (90%)
 Frame = +3

Query: 171 KNDCGERGSNTRPSDLQSDALPTELSPQLQY 263
           K  CGERGSNTRPSDLQSDALPTELSPQL Y
Sbjct: 38  KTKCGERGSNTRPSDLQSDALPTELSPQLIY 68


>ref|XP_003593955.1| 60S ribosomal protein L18a [Medicago truncatula]
           gi|355483003|gb|AES64206.1| 60S ribosomal protein L18a
           [Medicago truncatula]
          Length = 122

 Score = 58.5 bits (140), Expect = 3e-06
 Identities = 32/55 (58%), Positives = 39/55 (70%)
 Frame = -3

Query: 345 TQT*KDSIFAPEQSSKERLLPFCFLADNIAVAGIAQLGERQTEDLKVACSIHAHR 181
           TQ  +D+I    Q  +  L+   + +D + VAGIAQLGERQTEDLKVACSIHAHR
Sbjct: 71  TQEAEDNI----QGQEAELVYVMWSSDEMQVAGIAQLGERQTEDLKVACSIHAHR 121


>ref|XP_003608500.1| Cytochrome B561-related protein [Medicago truncatula]
           gi|355509555|gb|AES90697.1| Cytochrome B561-related
           protein [Medicago truncatula]
          Length = 344

 Score = 57.4 bits (137), Expect = 6e-06
 Identities = 30/46 (65%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
 Frame = -3

Query: 291 LLPFCFLADNIAV-AGIAQLGERQTEDLKVACSIHAHRNHFFLYLF 157
           LLPF      +   AGIAQLGERQTEDLKVACSIHAHR   F Y +
Sbjct: 292 LLPFYTKRSKVLTSAGIAQLGERQTEDLKVACSIHAHRICIFFYFY 337


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