BLASTX nr result
ID: Catharanthus23_contig00025161
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Catharanthus23_contig00025161
(451 letters)
Database: ./nr
37,332,560 sequences; 13,225,080,153 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004237378.1| PREDICTED: DNA repair and recombination prot... 97 2e-18
ref|XP_006350409.1| PREDICTED: DNA repair and recombination prot... 97 2e-18
ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citr... 96 4e-18
ref|XP_006487098.1| PREDICTED: DNA repair and recombination prot... 95 1e-17
gb|EXC17352.1| DNA repair protein rhp54 [Morus notabilis] 89 8e-16
gb|EMJ01940.1| hypothetical protein PRUPE_ppa024484mg [Prunus pe... 88 1e-15
dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa ... 88 1e-15
ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group] g... 88 1e-15
gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japo... 88 1e-15
gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indi... 88 1e-15
sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombinati... 88 1e-15
ref|XP_006384415.1| hypothetical protein POPTR_0004s14870g [Popu... 87 3e-15
ref|XP_004954012.1| PREDICTED: DNA repair and recombination prot... 87 3e-15
ref|XP_003573054.1| PREDICTED: DNA repair and recombination prot... 87 3e-15
ref|XP_006647954.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair a... 86 7e-15
emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera] 84 2e-14
ref|XP_004140701.1| PREDICTED: DNA repair and recombination prot... 84 3e-14
ref|XP_002282100.2| PREDICTED: DNA repair and recombination prot... 83 4e-14
emb|CBI32424.3| unnamed protein product [Vitis vinifera] 83 4e-14
ref|XP_004296072.1| PREDICTED: DNA repair and recombination prot... 82 1e-13
>ref|XP_004237378.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
lycopersicum]
Length = 956
Score = 97.4 bits (241), Expect = 2e-18
Identities = 48/68 (70%), Positives = 57/68 (83%)
Frame = -3
Query: 206 SSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYR 27
+S ++S EDRK QNVDALVRG+L+VKRQS+LPRVYSVTDAA LRKPFKPP S+GY
Sbjct: 42 ASQTGTSSPDEDRKSQNVDALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYS 101
Query: 26 NNNEQLAR 3
++NE LAR
Sbjct: 102 SSNEHLAR 109
>ref|XP_006350409.1| PREDICTED: DNA repair and recombination protein RAD54-like [Solanum
tuberosum]
Length = 952
Score = 97.1 bits (240), Expect = 2e-18
Identities = 47/63 (74%), Positives = 55/63 (87%)
Frame = -3
Query: 191 SASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQ 12
++S EDRK QNVDALVRG+L+VKRQS+LPRVYSVTDAA LRKPFKPP S+GY ++NE
Sbjct: 45 TSSPDEDRKSQNVDALVRGNLIVKRQSLLPRVYSVTDAAANLRKPFKPPSSNGYSSSNEH 104
Query: 11 LAR 3
LAR
Sbjct: 105 LAR 107
>ref|XP_006423032.1| hypothetical protein CICLE_v10027772mg [Citrus clementina]
gi|557524966|gb|ESR36272.1| hypothetical protein
CICLE_v10027772mg [Citrus clementina]
Length = 930
Score = 96.3 bits (238), Expect = 4e-18
Identities = 47/68 (69%), Positives = 55/68 (80%)
Frame = -3
Query: 206 SSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYR 27
+S+ SA EDRK +NVDALVRG+LVVKRQS+LPRV SVT+ A RKPFKPPCS+GY
Sbjct: 40 ASVADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYD 99
Query: 26 NNNEQLAR 3
N N+QLAR
Sbjct: 100 NGNDQLAR 107
>ref|XP_006487098.1| PREDICTED: DNA repair and recombination protein RAD54-like [Citrus
sinensis]
Length = 930
Score = 94.7 bits (234), Expect = 1e-17
Identities = 47/68 (69%), Positives = 54/68 (79%)
Frame = -3
Query: 206 SSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYR 27
+S SA EDRK +NVDALVRG+LVVKRQS+LPRV SVT+ A RKPFKPPCS+GY
Sbjct: 40 ASAADSAPSDEDRKSKNVDALVRGNLVVKRQSLLPRVLSVTEGAAVCRKPFKPPCSNGYD 99
Query: 26 NNNEQLAR 3
N N+QLAR
Sbjct: 100 NGNDQLAR 107
>gb|EXC17352.1| DNA repair protein rhp54 [Morus notabilis]
Length = 941
Score = 88.6 bits (218), Expect = 8e-16
Identities = 42/58 (72%), Positives = 49/58 (84%)
Frame = -3
Query: 176 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLAR 3
EDRK NVDALVRG+LVVKRQS+LPRV SVT+ + RKPFKPPCSDGY + N++LAR
Sbjct: 116 EDRKSTNVDALVRGNLVVKRQSLLPRVLSVTEGSAVCRKPFKPPCSDGYSSQNDELAR 173
>gb|EMJ01940.1| hypothetical protein PRUPE_ppa024484mg [Prunus persica]
Length = 872
Score = 88.2 bits (217), Expect = 1e-15
Identities = 44/69 (63%), Positives = 53/69 (76%)
Frame = -3
Query: 209 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 30
R S+ ED+K +NVDALVRG+LVVKRQS+LPRV SVT+ A RKPFKPPCS+GY
Sbjct: 45 RKSMDPPRPSGEDQKSKNVDALVRGNLVVKRQSLLPRVLSVTEGATVCRKPFKPPCSNGY 104
Query: 29 RNNNEQLAR 3
+ N+QLAR
Sbjct: 105 DDGNDQLAR 113
>dbj|BAD17217.1| putative DNA repair protein rhp54 [Oryza sativa Japonica Group]
Length = 912
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = -3
Query: 209 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 30
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 29 RNNNEQLAR 3
NNEQLAR
Sbjct: 151 SENNEQLAR 159
>ref|NP_001048207.2| Os02g0762800 [Oryza sativa Japonica Group]
gi|255671267|dbj|BAF10121.2| Os02g0762800 [Oryza sativa
Japonica Group]
Length = 879
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = -3
Query: 209 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 30
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 29 RNNNEQLAR 3
NNEQLAR
Sbjct: 151 SENNEQLAR 159
>gb|EEE57852.1| hypothetical protein OsJ_08484 [Oryza sativa Japonica Group]
Length = 952
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = -3
Query: 209 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 30
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 29 RNNNEQLAR 3
NNEQLAR
Sbjct: 151 SENNEQLAR 159
>gb|EEC74047.1| hypothetical protein OsI_09041 [Oryza sativa Indica Group]
Length = 952
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = -3
Query: 209 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 30
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 29 RNNNEQLAR 3
NNEQLAR
Sbjct: 151 SENNEQLAR 159
>sp|A4PBL4.1|RAD54_ORYSJ RecName: Full=DNA repair and recombination protein RAD54;
Short=OsRad54 gi|144369229|dbj|BAF56217.1| OsRad54
[Oryza sativa Japonica Group]
Length = 980
Score = 87.8 bits (216), Expect = 1e-15
Identities = 42/69 (60%), Positives = 52/69 (75%)
Frame = -3
Query: 209 RSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGY 30
RS+ + +RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY
Sbjct: 91 RSACRGVRANDRERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGY 150
Query: 29 RNNNEQLAR 3
NNEQLAR
Sbjct: 151 SENNEQLAR 159
>ref|XP_006384415.1| hypothetical protein POPTR_0004s14870g [Populus trichocarpa]
gi|550341033|gb|ERP62212.1| hypothetical protein
POPTR_0004s14870g [Populus trichocarpa]
Length = 932
Score = 86.7 bits (213), Expect = 3e-15
Identities = 41/58 (70%), Positives = 49/58 (84%)
Frame = -3
Query: 176 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLAR 3
EDRK +NVD L+RG+LVV+RQS+LPRV SVT+ A RKPFKPPCS+GY + NEQLAR
Sbjct: 49 EDRKSKNVDDLLRGNLVVRRQSLLPRVLSVTEGAAICRKPFKPPCSNGYNDGNEQLAR 106
>ref|XP_004954012.1| PREDICTED: DNA repair and recombination protein RAD54-like [Setaria
italica]
Length = 972
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/57 (70%), Positives = 48/57 (84%)
Frame = -3
Query: 173 DRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLAR 3
+RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY NNEQLAR
Sbjct: 96 ERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLAR 152
>ref|XP_003573054.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Brachypodium distachyon]
Length = 965
Score = 86.7 bits (213), Expect = 3e-15
Identities = 40/58 (68%), Positives = 48/58 (82%)
Frame = -3
Query: 176 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLAR 3
E+RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY NNE LAR
Sbjct: 88 EERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCENGYSENNEHLAR 145
>ref|XP_006647954.1| PREDICTED: LOW QUALITY PROTEIN: DNA repair and recombination
protein RAD54-like [Oryza brachyantha]
Length = 974
Score = 85.5 bits (210), Expect = 7e-15
Identities = 39/57 (68%), Positives = 48/57 (84%)
Frame = -3
Query: 173 DRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLAR 3
+RK QNVDALVRG+LVV+RQ ++PR+ SV+DAA RKPFKPPC +GY NNEQL+R
Sbjct: 97 ERKSQNVDALVRGNLVVRRQPLIPRILSVSDAAAIARKPFKPPCQNGYSENNEQLSR 153
>emb|CAN70202.1| hypothetical protein VITISV_021223 [Vitis vinifera]
Length = 985
Score = 84.0 bits (206), Expect = 2e-14
Identities = 41/65 (63%), Positives = 50/65 (76%)
Frame = -3
Query: 203 SIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRN 24
S + S + E RK QNVDAL+RG+LVV+RQS+LPRV SVTD A RKPFKPP S+GY +
Sbjct: 39 SAVKSPTSDEGRKSQNVDALLRGNLVVRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 98
Query: 23 NNEQL 9
N+QL
Sbjct: 99 RNDQL 103
>ref|XP_004140701.1| PREDICTED: DNA repair and recombination protein RAD54-like [Cucumis
sativus] gi|449497618|ref|XP_004160452.1| PREDICTED: DNA
repair and recombination protein RAD54-like [Cucumis
sativus]
Length = 928
Score = 83.6 bits (205), Expect = 3e-14
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = -3
Query: 218 EVRRSSIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCS 39
E +SS +S +S ED K +NVDAL+RG+LVV+RQS+LPRV SV + A RKPFKPPCS
Sbjct: 34 EEEQSSSLSPSSD-EDLKSKNVDALLRGNLVVRRQSLLPRVLSVAEGAAVCRKPFKPPCS 92
Query: 38 DGYRNNNEQLAR 3
GY N QLAR
Sbjct: 93 SGYDERNNQLAR 104
>ref|XP_002282100.2| PREDICTED: DNA repair and recombination protein RAD54-like [Vitis
vinifera]
Length = 934
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = -3
Query: 203 SIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRN 24
S + S + E RK QNVDAL+RG+LV++RQS+LPRV SVTD A RKPFKPP S+GY +
Sbjct: 39 SAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 98
Query: 23 NNEQL 9
N+QL
Sbjct: 99 RNDQL 103
>emb|CBI32424.3| unnamed protein product [Vitis vinifera]
Length = 1112
Score = 82.8 bits (203), Expect = 4e-14
Identities = 40/65 (61%), Positives = 50/65 (76%)
Frame = -3
Query: 203 SIISSASGKEDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRN 24
S + S + E RK QNVDAL+RG+LV++RQS+LPRV SVTD A RKPFKPP S+GY +
Sbjct: 33 SAVKSPTSDEGRKSQNVDALLRGNLVLRRQSLLPRVLSVTDGAAVARKPFKPPFSNGYHD 92
Query: 23 NNEQL 9
N+QL
Sbjct: 93 RNDQL 97
>ref|XP_004296072.1| PREDICTED: DNA repair and recombination protein RAD54-like
[Fragaria vesca subsp. vesca]
Length = 926
Score = 81.6 bits (200), Expect = 1e-13
Identities = 39/58 (67%), Positives = 47/58 (81%)
Frame = -3
Query: 176 EDRKFQNVDALVRGDLVVKRQSILPRVYSVTDAAERLRKPFKPPCSDGYRNNNEQLAR 3
+DRK +NVDAL+ G+LVVKRQ +LPRV SVT+ A RKPFKPPCS GY + N+QLAR
Sbjct: 41 KDRKSKNVDALLSGNLVVKRQPLLPRVLSVTEGATVCRKPFKPPCSKGYDDGNDQLAR 98