BLASTX nr result

ID: Catharanthus23_contig00025068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Catharanthus23_contig00025068
         (459 letters)

Database: ./nr 
           37,332,560 sequences; 13,225,080,153 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]    47   2e-10
emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]    46   9e-10
emb|CBI36427.3| unnamed protein product [Vitis vinifera]               44   2e-08

>emb|CAN71427.1| hypothetical protein VITISV_027864 [Vitis vinifera]
          Length = 1300

 Score = 47.4 bits (111), Expect(2) = 2e-10
 Identities = 35/100 (35%), Positives = 49/100 (49%), Gaps = 3/100 (3%)
 Frame = -3

Query: 301 VEGNATISEAQESHSDDE*NIQETLAMVEFQVETQTKYAATEGSTSLLVNTRPTSD---K 131
           VE NAT S+     S+DE + Q   A +              G ++ +  T    D    
Sbjct: 280 VESNATTSK-----SEDEWDAQAFFAAI--------------GESAFIATTSEQIDYEKD 320

Query: 130 WIINSGVATYMIGNGEKLLI*TEYKGSWMVVIADNMRFPI 11
           WII+SG + +M G+ EKL   +EYKG  MVV A+N + PI
Sbjct: 321 WIIDSGCSNHMTGDKEKLQDLSEYKGRHMVVTANNSKLPI 360



 Score = 43.5 bits (101), Expect(2) = 2e-10
 Identities = 20/53 (37%), Positives = 28/53 (52%), Gaps = 7/53 (13%)
 Frame = -1

Query: 450 RITRHPKKSQQEGGAKDSEEEYKSSN-------NSRCYNCGKKGHYARDCWSK 313
           R  ++  K++   G + +  E  S N         +CYNC KKGH A+DCWSK
Sbjct: 224 RTKKNEDKAKCSQGERSARVEGDSKNPGTXKKFEGKCYNCXKKGHMAKDCWSK 276


>emb|CAN61340.1| hypothetical protein VITISV_007301 [Vitis vinifera]
          Length = 973

 Score = 45.8 bits (107), Expect(2) = 9e-10
 Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
 Frame = -3

Query: 301 VEGNATISEAQESHSDDE*NIQETLAMVEFQVETQTKYAATEGSTSLLVNTRPTSD---K 131
           VE NAT S++++                  + +TQ  +AA  G ++ +  T    D    
Sbjct: 215 VENNATTSKSKD------------------EWDTQAFFAAX-GESAFIATTSEQIDYEKD 255

Query: 130 WIINSGVATYMIGNGEKLLI*TEYKGSWMVVIADNMRFPI 11
           WII+SG + +M G+ EKL   +EYKG  MVV  +N + PI
Sbjct: 256 WIIDSGCSNHMTGDKEKLQDFSEYKGRHMVVTXNNSKLPI 295



 Score = 42.7 bits (99), Expect(2) = 9e-10
 Identities = 20/54 (37%), Positives = 28/54 (51%), Gaps = 7/54 (12%)
 Frame = -1

Query: 453 GRITRHPKKSQQEGGAKDSEEEYKSSN-------NSRCYNCGKKGHYARDCWSK 313
           GR  ++  K++   G + +  +  S N         RCYNC KKG  A+DCWSK
Sbjct: 158 GRTKKNEDKAKSSQGERSARVKGDSKNLGTRKKFQGRCYNCRKKGXMAKDCWSK 211


>emb|CBI36427.3| unnamed protein product [Vitis vinifera]
          Length = 216

 Score = 44.3 bits (103), Expect(2) = 2e-08
 Identities = 31/93 (33%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
 Frame = -3

Query: 280 SEAQESHSDDE*NIQETLAMVEFQVETQTKYAATEGSTSLLVNTRPTSD---KWIINSGV 110
           S A  S S+DE + Q   A +              G ++ +  T    D    WII+SG 
Sbjct: 87  SNAATSKSEDEWDAQVFFAAI--------------GESAFIATTSEKIDYEKDWIIDSGC 132

Query: 109 ATYMIGNGEKLLI*TEYKGSWMVVIADNMRFPI 11
           + +M G+ EKL   +EYKG  MVV  +N + PI
Sbjct: 133 SNHMTGDKEKLQDLSEYKGRHMVVTVNNSKLPI 165



 Score = 40.0 bits (92), Expect(2) = 2e-08
 Identities = 21/45 (46%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
 Frame = -1

Query: 432 KKSQQEGGAKDSEEEYKSSNN-----SRCYNCGKKGHYARDCWSK 313
           K SQ E  A+  EE+ K+         +CYNC KK H A+DCWSK
Sbjct: 38  KSSQGERNAR-VEEDLKNLGTRKKFEGKCYNCRKKCHMAKDCWSK 81


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